FastQCFastQC Report
Sat 16 Sept 2023
SRR15359371_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR15359371_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences45421640
Total Bases2.3 Gbp
Sequences flagged as poor quality0
Sequence length51
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATA1151577625.35306078776548No Hit
ATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGATCG38676398.514969957051308No Hit
TGTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAATAGAT24741155.44699618948149No Hit
ATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGATCGG22550114.964618186397496No Hit
TGTTTTTTTACTTATTCAATTAAGCGGGGCCTGTAGGCACCATCAATAGA9532042.098567995343189No Hit
TTGTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAATAGA5244611.154650074281774No Hit
TTTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATA4642351.0220568874219425No Hit
TTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATAG3598940.7923403910558932No Hit
ATGGGCCCCGCGTTCGATTCGCGGCTGGCGCCTGTAGGCACCATCAATAG3109560.6845987947595022No Hit
ATTTGAGTAAGAGCGTTAAGCCTTGGCTGTAGGCACCATCAATAGATCGG2910970.6408773439268155No Hit
ATTAAATCAGTTATAGTTTATTTGATACTGTAGGCACCATCAATAGATCG2705020.5955355200736917No Hit
ACTATGCCGATTAGGGATCGGACGGTGCTGTAGGCACCATCAATAGATCG2615330.5757894254808942No Hit
TGTAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAG2458020.541156153762832No Hit
TCGTCCAACTTCTGGTTTTAAGGTCCTCTGTAGGCACCATCAATAGATCG2383720.5247983119940187No Hit
ACTATGCCGATTAGGGATCGGACGGTGTCTGTAGGCACCATCAATAGATC2154520.47433778260758525No Hit
TTGTTTTTTTACTTATTCAATTAAGCGGGGCCTGTAGGCACCATCAATAG2021030.4449487072681656No Hit
TTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAATAGATC1663030.36613165002408543No Hit
TCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATAGA1650670.3634104801147647No Hit
TGTAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGA1452920.31987396315941036No Hit
CGATGGGCCCCGCGTTCGATTCGCGGCTGGCGCCTGTAGGCACCATCAAT1411150.3106779059496751No Hit
TATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGATC1195530.2632071409134501No Hit
AGTATCCTTTCATTCTTATGTGGGGGACTGTAGGCACCATCAATAGATCG1166890.2569017763339237No Hit
TGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGATCGG1122670.2471663286486353No Hit
GTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAATAGATC1094680.2410040676646638No Hit
AATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGATC995410.21914884623276482No Hit
ATTTGAGTAAGAGCGTTAAGCCTTGCTGTAGGCACCATCAATAGATCGGA957890.21088846637858077No Hit
ATTCTGGCGAGCATGCCTGTTCGAGCGTCATTTCTGTAGGCACCATCAAT951980.20958732445592013No Hit
ATGGGTTAGTCGATCCTAAGCCATAGGGCTGTAGGCACCATCAATAGATC910160.20038025927729602No Hit
GCCAAGGATGTTTTCATTAATCAGGAACGACTGTAGGCACCATCAATAGA901950.19857275078574882No Hit
TCGTCCAACTTCTGGTTTTAAGGTCCTTCTGTAGGCACCATCAATAGATC883080.19441834332710137No Hit
AAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGAT858340.18897160032090432No Hit
GATGGGCCCCGCGTTCGATTCGCGGCTGGCGCCTGTAGGCACCATCAATA841060.18516724627292191No Hit
ACTGACTGGGTCGGGCCTTTTTTCCTGGACTGTAGGCACCATCAATAGAT837980.18448915538936947No Hit
ATTGTAATTTTAACACGCGCTGGACTGTAGGCACCATCAATAGATCGGAA833410.18348302703292968No Hit
TAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGAT823890.18138710975649494No Hit
ATAGTAGGCAATTTAAGTAACATCTTACTGTAGGCACCATCAATAGATCG820000.18053068977694334No Hit
TATTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT817890.18006615348983435No Hit
ATATATCAAATCATCTTTATGCTATTCTGTAGGCACCATCAATAGATCGG785840.1730100454320892No Hit
ATCGATGAAGAACGCAGCGAAATGCGATCTGTAGGCACCATCAATAGATC781920.1721470206712043No Hit
ATATATATATCAAATCATCTTTATGCTATTCTGTAGGCACCATCAATAGA749190.16494120423657094No Hit
ATTGTAATTTTAACACGCGCTGGATCTGTAGGCACCATCAATAGATCGGA742800.16353438581257745No Hit
ATAGATGTGCATAGTTAAACCGATCATTACTGTAGGCACCATCAATAGAT728230.16032666367837006No Hit
TTGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGATCG715410.157504220455272No Hit
TTTTTTTTACTTATTCAATTAAGCGGGGCCTGTAGGCACCATCAATAGAT695800.1531868950570697No Hit
AGTGAATCATCGAATCTTTGAACGCACCTGTAGGCACCATCAATAGATCG665510.14651826750421165No Hit
CTATGCCGATTAGGGATCGGACGGTGTCTGTAGGCACCATCAATAGATCG653860.14395341075311238No Hit
ATAGTAGGCAATTTAAGTAACATCTTAGCTGTAGGCACCATCAATAGATC621210.13676520706870118No Hit
TCTTCCGTAGTATAGTGGTCAGTATGTGAGCCTGTAGGCACCATCAATAG619490.13638653293892514No Hit
AACTATGCCGATTAGGGATCGGACGGTGCTGTAGGCACCATCAATAGATC594240.13082750865006196No Hit
TTTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAATAGAT554920.12217084191587975No Hit
GTGTAGCGGTAACATCGTTGACTGTAGGCACCATCAATAGATCGGAAGAG549380.1209511589629965No Hit
TTGGGTCGGGCCTTTTTTCCTGGAGAACCGCCTGTAGGCACCATCAATAG530300.11675051803501592No Hit
TTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAATAGATCG514800.11333804767947613No Hit
CTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATAGAT512900.11291974486170028No Hit
ATTATATATCAAATCATCTTTATGCTATTCTGTAGGCACCATCAATAGAT510740.11244420060570247No Hit
ATAGATGTGCATAGTTAAACCGATCATTCTGTAGGCACCATCAATAGATC502830.11070273992748832No Hit
ATGGGTTAGTCGATCCTAAGCCATAGGGACTGTAGGCACCATCAATAGAT501350.1103769040483787No Hit
AGGACCGAAGTGGGGAAAGGTTCCATGCTGTAGGCACCATCAATAGATCG488910.10763812138883581No Hit
TCGATGGGCCCCGCGTTCGATTCGCGGCTGGCGCCTGTAGGCACCATCAA472280.10397687093640828No Hit
AATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGATCG470940.10368185737018742No Hit
TCGACCAGCGAATCCCTGGTGTTGTATGTCTGTAGGCACCATCAATAGAT470260.10353214899329923No Hit
TCGGGTATGGTGTAGCGGTAACATCGTTGACTGTAGGCACCATCAATAGA466670.10274177682708066No Hit
ATTCTGGCGAGCATGCCTGTTCGAGCGTCATTCCGTAGGCACCATCAATA464330.10222660388308305No Hit
TTGGGTCGGGCCTTTTTTCCTGGAGAACCGCTGTAGGCACCATCAATAGA458100.10085501095953382No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)