FastQCFastQC Report
Sat 16 Sept 2023
SRR15359372_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR15359372_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences93027332
Total Bases4.7 Gbp
Sequences flagged as poor quality0
Sequence length51
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATA2613744228.09651898863444No Hit
TGTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAATAGAT56713566.096440560071098No Hit
ATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGATCGG54911665.902744797625712No Hit
ATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGATCG46352984.982727011885067No Hit
TTTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATA16988811.8262170519949987No Hit
TGTTTTTTTACTTATTCAATTAAGCGGGGCCTGTAGGCACCATCAATAGA12861651.3825667923057279No Hit
TTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATAG12724761.3678517621036363No Hit
TTGTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAATAGA7825030.8411538664787247No Hit
TGTAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAG6247670.6715950963744719No Hit
TCGTCCAACTTCTGGTTTTAAGGTCCTCTGTAGGCACCATCAATAGATCG6207100.6672340124728074No Hit
TGTAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGA4417980.4749120398293267No Hit
TGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGATCGG4071020.4376154741275392No Hit
AGTATCCTTTCATTCTTATGTGGGGGACTGTAGGCACCATCAATAGATCG3869930.41599924632902513No Hit
ATATATCAAATCATCTTTATGCTATTCTGTAGGCACCATCAATAGATCGG3471210.373138724434234No Hit
CGATGGGCCCCGCGTTCGATTCGCGGCTGGCGCCTGTAGGCACCATCAAT3263900.35085387593401046No Hit
TCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATAGA3086530.33178743640632413No Hit
TATTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT2883740.3099884666153814No Hit
ATTTGAGTAAGAGCGTTAAGCCTTGGCTGTAGGCACCATCAATAGATCGG2761450.29684286764238277No Hit
TATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGATC2684250.2885442312803295No Hit
ACTATGCCGATTAGGGATCGGACGGTGTCTGTAGGCACCATCAATAGATC2553080.2744440741351155No Hit
ATGGGCCCCGCGTTCGATTCGCGGCTGGCGCCTGTAGGCACCATCAATAG2373120.2550992218071996No Hit
ATTAAATCAGTTATAGTTTATTTGATACTGTAGGCACCATCAATAGATCG2223160.23897922816920086No Hit
TTGTTTTTTTACTTATTCAATTAAGCGGGGCCTGTAGGCACCATCAATAG2104830.2262593105432713No Hit
TTGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGATCG2055740.22098236677367034No Hit
GATGGGCCCCGCGTTCGATTCGCGGCTGGCGCCTGTAGGCACCATCAATA1957040.21037258168384318No Hit
AAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGAT1945770.20916110976933103No Hit
TCTTCCGTAGTATAGTGGTCAGTATGTGAGCCTGTAGGCACCATCAATAG1898210.20404863379291585No Hit
TCGTCCAACTTCTGGTTTTAAGGTCCTTCTGTAGGCACCATCAATAGATC1706220.18341061313034324No Hit
TTGGGTCGGGCCTTTTTTCCTGGAGAACCGCTGTAGGCACCATCAATAGA1626700.17486258769626972No Hit
ATAGTAGGCAATTTAAGTAACATCTTACTGTAGGCACCATCAATAGATCG1625880.17477444155874533No Hit
GTCTAGTGGTATGATTCTCGCTTCTGTAGGCACCATCAATAGATCGGAAG1601620.17216660583149906No Hit
ACCGGCCGGCGGCTTTCAGCATCCGGGTCTGTAGGCACCATCAATAGATC1590660.1709884574567827No Hit
GTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAATAGATC1529700.16443554459887122No Hit
AATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGATC1507260.16202335029881326No Hit
ATAGTAGGCAATTTAAGTAACATCTTAGCTGTAGGCACCATCAATAGATC1503880.16166001621974926No Hit
ACTATGCCGATTAGGGATCGGACGGTGCTGTAGGCACCATCAATAGATCG1486740.15981754695491No Hit
ATTTGAGTAAGAGCGTTAAGCCTTGCTGTAGGCACCATCAATAGATCGGA1406420.15118352528910536No Hit
ACTGACTGGGTCGGGCCTTTTTTCCTGGACTGTAGGCACCATCAATAGAT1326190.14255917819937047No Hit
ATTGTAATTTTAACACGCGCTGGACTGTAGGCACCATCAATAGATCGGAA1318180.14169814092916264No Hit
ATTCTGGCGAGCATGCCTGTTCGAGCGTCATTTCTGTAGGCACCATCAAT1267070.13620405667444058No Hit
TATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGATCG1262670.1357310773999194No Hit
TCCGGGTGCAGAAGCCCTTAGCAGACTCTGTAGGCACCATCAATAGATCG1259420.13538171770851173No Hit
TAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGAT1249180.13428096594235336No Hit
ATATATATATCAAATCATCTTTATGCTATTCTGTAGGCACCATCAATAGA1241630.13346937650539092No Hit
ATAGATGTGCATAGTTAAACCGATCATTACTGTAGGCACCATCAATAGAT1194520.12840527340932448No Hit
AAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGATC1191170.1280451641889504No Hit
CGATGGGCCCCGCGTTCGATTCGCGGCTGGCGCTGTAGGCACCATCAATA1143290.12289828971984278No Hit
AATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGATCG1091890.11737303183111819No Hit
TCGGGTATGGTGTAGCGGTAACATCGTTGACTGTAGGCACCATCAATAGA1070660.11509090683155354No Hit
TTATATATCAAATCATCTTTATGCTATTCTGTAGGCACCATCAATAGATC1032420.11098028695480593No Hit
TTGGGTCGGGCCTTTTTTCCTGGAGAACCGCCTGTAGGCACCATCAATAG1032250.11096201275556307No Hit
ATTCTGGCGAGCATGCCTGTTCGAGCGTCATTCCGTAGGCACCATCAATA1028250.11053203159690746No Hit
GTGTAGTTGGTTATCACGTCAGTCTGTAGGCACCATCAATAGATCGGAAG1004580.10798761809056288No Hit
GTTTAGTGGTAAAATCCATCGTCTGTAGGCACCATCAATAGATCGGAAGA1002650.10778015218151156No Hit
TAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGATC989260.1063407902529119No Hit
ATAGATGTGCATAGTTAAACCGATCATTCTGTAGGCACCATCAATAGATC985730.10596133188039833No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)