FastQCFastQC Report
Sun 10 Sept 2023
SRR15359375_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR15359375_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences134729194
Total Bases6.8 Gbp
Sequences flagged as poor quality0
Sequence length51
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAATAGAT78417975.8204140967398645No Hit
ATTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATA46679723.4647071368956603No Hit
GTGTAGCGGTAACATCGTTGACTGTAGGCACCATCAATAGATCGGAAGAG35407522.6280510518009925No Hit
TGTTTTTTTACTTATTCAATTAAGCGGGGCCTGTAGGCACCATCAATAGA29929602.221463597562975No Hit
TTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATAG24223731.7979570188774379No Hit
TTTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATA20991271.5580342594493664No Hit
ATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGATCG16475371.222850780210264No Hit
TGTAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAG14130601.0488150029309906No Hit
CTGGAGATAGGGTTTAATGGCCGGCTGTAGGCACCATCAATAGATCGGAA12729680.9448345694103981No Hit
TCGTCCAACTTCTGGTTTTAAGGTCCCTGTAGGCACCATCAATAGATCGG12724890.9444790414169627No Hit
TGTAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGA12451860.9242139457911401No Hit
ATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGATCGG12197030.9052997080944462No Hit
GTTTAGTGGTAAAATCCATCGTCTGTAGGCACCATCAATAGATCGGAAGA11407350.8466873185628945No Hit
TCGTCCAACTTCTGGTTTTAAGGTCCTCTGTAGGCACCATCAATAGATCG10856400.8057941770214998No Hit
ACTATGCCGATTAGGGATCGGACGGTGTCTGTAGGCACCATCAATAGATC10802800.8018158261972531No Hit
TCCGGGTGCAGAAGCCCTTAGCAGACTCTGTAGGCACCATCAATAGATCG10352490.7683924836661608No Hit
TCCAACTTCTGGTTTTAAGGTCCTCTGTAGGCACCATCAATAGATCGGAA9604220.7128536670381922No Hit
TCGATGGGCCCCGCGTTCGATTCGCGGCTGGCGCCTGTAGGCACCATCAA9269560.6880142101941172No Hit
AGTATCCTTTCATTCTTATGTGGGGGACTGTAGGCACCATCAATAGATCG8904650.6609295087150896No Hit
CTATGCCGATTAGGGATCGGACGGTGTCTGTAGGCACCATCAATAGATCG8379090.6219208882077926No Hit
CGATGGGCCCCGCGTTCGATTCGCGGCTGGCGCCTGTAGGCACCATCAAT8198140.6084902430278029No Hit
TCGTCCAACTTCTGGTTTTAAGGTCCTGTAGGCACCATCAATAGATCGGA7701460.5716251816959582No Hit
TCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATAGA7240270.5373942933259143No Hit
ACTATGCCGATTAGGGATCGGACGGTGCTGTAGGCACCATCAATAGATCG7159050.5313659042597701No Hit
ACCGGCCGGCGGCTTTCAGCATCCGGGTCTGTAGGCACCATCAATAGATC6456560.4792250148843019No Hit
TTGGGTCGGGCCTTTTTTCCTGGACTGTAGGCACCATCAATAGATCGGAA6431470.4773627607391461No Hit
AGCATCCGGGTGCAGAAGCCCTTAGCCTGTAGGCACCATCAATAGATCGG6029140.4475006359794596No Hit
TGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGATCGGA5751500.4268933724935666No Hit
ATATATCAAATCATCTTTATGCTATTCTGTAGGCACCATCAATAGATCGG5740270.42605984861751645No Hit
CCAACTTCTGGTTTTAAGGTCCTTCTGTAGGCACCATCAATAGATCGGAA5562500.4128652324603085No Hit
GTCTAGTGGTATGATTCGCCTGTAGGCACCATCAATAGATCGGAAGAGCA5540450.411228616123095No Hit
GTCTAGTGGTATGATTCTCGCTTCTGTAGGCACCATCAATAGATCGGAAG5352270.39726133891961085No Hit
GTGTAGTTGGTTATCACGTCAGTCTGTAGGCACCATCAATAGATCGGAAG5322840.3950769571144321No Hit
TGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGATCGG4903190.3639292906331793No Hit
ATATCAAATCATCTTTATGCTATTCTGTAGGCACCATCAATAGATCGGAA4858280.3605959373586099No Hit
GCATCCGGGTGCAGAAGCCCTTAGCCTGTAGGCACCATCAATAGATCGGA4744790.35217237327197254No Hit
TATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGATC4654580.3454767197672095No Hit
TCCAACTTCTGGTTTTAAGGTCCTTCTGTAGGCACCATCAATAGATCGGA4601140.341510244617065No Hit
GTCTAGTGGTATGATTTCTGTCTGTAGGCACCATCAATAGATCGGAAGAG4585780.34037017990325097No Hit
TATTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT4409590.32729283602780257No Hit
TCGTCCAACTTCTGGTTTTAAGGTCCTTCTGTAGGCACCATCAATAGATC4377190.32488801202210116No Hit
TTGTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAATAGA4340520.32216625596379656No Hit
TCGATGGGCCCCGCGTTCGATTCGCGGCTGGCGCTGTAGGCACCATCAAT4222360.31339607063930036No Hit
GTGTAGCGGTAACATCGTTGACCTGTAGGCACCATCAATAGATCGGAAGA4161300.30886401651003714No Hit
TATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGATCG3467160.257342888876779No Hit
AAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGAT3320260.24643953559166992No Hit
GTTTAGTGGTAAAATCCATCGTTCTGTAGGCACCATCAATAGATCGGAAG3300540.24497585875857017No Hit
TATATCAAATCATCTTTATGCTATTCTGTAGGCACCATCAATAGATCGGA3112260.2310011592587721No Hit
TGTCCAACTTCTGGTTTTAAGGTCCTCTGTAGGCACCATCAATAGATCGG2981990.22133213385066344No Hit
GCTCAGTTGGTAGAGCTTTCGCCTGTAGGCACCATCAATAGATCGGAAGA2871240.21311194068302672No Hit
AAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGATC2815790.20899627737697296No Hit
CGATGGGCCCCGCGTTCGATTCGCGGCTGGCGCTGTAGGCACCATCAATA2800120.2078332035445859No Hit
TCTTCCGTAGTATAGTGGTCAGTATGTGAGCCTGTAGGCACCATCAATAG2753550.20437664015120582No Hit
TTGGGTCGGGCCTTTTTTCCTGGAGCTGTAGGCACCATCAATAGATCGGA2721330.20198517627886947No Hit
TGGGTCGGGCCTTTTTTCCTGGACTGTAGGCACCATCAATAGATCGGAAG2716720.20164300841879895No Hit
CTATGCCGATTAGGGATCGGACGGTGCTGTAGGCACCATCAATAGATCGG2699020.20032926197123987No Hit
CCAGCGAATCCCTGGTGTTGTATGTCTGTAGGCACCATCAATAGATCGGA2643170.19618390947993056No Hit
CTGGAGATAGGGTTTAATGGCCGCTGTAGGCACCATCAATAGATCGGAAG2496180.18527387612813892No Hit
TTATATATCAAATCATCTTTATGCTATTCTGTAGGCACCATCAATAGATC2494150.1851232035129669No Hit
GCCAAGGATGTTTTCATTAATCAGGAACGACTGTAGGCACCATCAATAGA2391550.1775079274949125No Hit
TAGTTGGTGGAGTGATTTGTCTGCTGTAGGCACCATCAATAGATCGGAAG2382080.1768050360339868No Hit
TCTATGCCGATTAGGGATCGGACGGTGTCTGTAGGCACCATCAATAGATC2365950.17560781963855585No Hit
AGCATCCGGGTGCAGAAGCCCTTAGCTGTAGGCACCATCAATAGATCGGA2348820.17433638027998594No Hit
TTATATCAAATCATCTTTATGCTATTCTGTAGGCACCATCAATAGATCGG2309400.17141051107304925No Hit
TCGATGGGCCCCGCGTTCGATTCGCGGCTGGCGCACTGTAGGCACCATCA2305230.1711010013167599No Hit
TAGAGGTTATCAACATATGAACTCTCTGTAGGCACCATCAATAGATCGGA2247120.16678790492875656No Hit
CGATGGGCCCCGCGTTCGATTCGCGGCTGGCGCACTGTAGGCACCATCAA2181420.16191145625052875No Hit
AACTATGCCGATTAGGGATCGGACGGTGTCTGTAGGCACCATCAATAGAT2100510.15590607630295775No Hit
GTGTAGCGGTAACATCGTTGCTGTAGGCACCATCAATAGATCGGAAGAGC2049850.15214594099033948No Hit
TCGGGTATGGTGTAGCGGTAACATCGTTGACTGTAGGCACCATCAATAGA2031270.15076687833521812No Hit
CGAGAGGACCCAGGTTCGATTCCTGGCAATCCCCTGTAGGCACCATCAAT2002310.14861738132271465No Hit
CAGTATCCTTTCATTCTTATGTGGGGGACTGTAGGCACCATCAATAGATC1983500.14722124738607137No Hit
GTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAATAGATC1963460.14573381920476713No Hit
TACCTGGTTGATTCTGCCAGTAGTCCTGTAGGCACCATCAATAGATCGGA1947670.14456183861680344No Hit
TTGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGATCGG1903960.14131755289800071No Hit
TGTTTTTTTACTTATTCAATTAAGCGGGGCTGGCTGTAGGCACCATCAAT1834470.13615979918947635No Hit
TTCCAACTTCTGGTTTTAAGGTCCTCTGTAGGCACCATCAATAGATCGGA1823670.13535819118757586No Hit
TGTCCAACTTCTGGTTTTAAGGTCCCTGTAGGCACCATCAATAGATCGGA1815740.13476960308988414No Hit
CGTCCAACTTCTGGTTTTAAGGTCCCTGTAGGCACCATCAATAGATCGGA1794680.13320646748617823No Hit
TAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGATC1787550.13267725775899764No Hit
GTAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGA1725680.12808508302959193No Hit
TATTGTAATTTTAACACGCGCTGGACTGTAGGCACCATCAATAGATCGGA1711390.1270244368863366No Hit
TAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGAT1705150.12656128559634966No Hit
GTTTAGTGGTAAAATCCATCGCTGTAGGCACCATCAATAGATCGGAAGAG1693550.12570029922393805No Hit
GTAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGAT1687500.12525125029694753No Hit
TCTGGAGATAGGGTTTAATGGCCGGCTGTAGGCACCATCAATAGATCGGA1686080.12514585368929024No Hit
GTCTAGTGGTATGATTCTCGCCTGTAGGCACCATCAATAGATCGGAAGAG1673980.12424775583530917No Hit
GTATCCTTTCATTCTTATGTGGGGGACTGTAGGCACCATCAATAGATCGG1660880.12327543501818915No Hit
CCAACTTCTGGTTTTAAGGTCCTCTGTAGGCACCATCAATAGATCGGAAG1658170.12307429078808264No Hit
CGTCCAACTTCTGGTTTTAAGGTCCTCTGTAGGCACCATCAATAGATCGG1656340.12293846276553841No Hit
CTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATAGAT1653090.12269723813533688No Hit
ACCAGCGAATCCCTGGTGTTGTATGTCTGTAGGCACCATCAATAGATCGG1639070.12165663219212905No Hit
TTGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGATCG1626910.12075408096035964No Hit
TTGTTTTTTTACTTATTCAATTAAGCGGGGCCTGTAGGCACCATCAATAG1544870.11466482906444167No Hit
AGTTGGTGGAGTGATTTGTCTGCCTGTAGGCACCATCAATAGATCGGAAG1531320.11365910791390915No Hit
AACTATGCCGATTAGGGATCGGACGGTGCTGTAGGCACCATCAATAGATC1525000.1131900187868711No Hit
CGCTCGAGACCCGGGTTCAATTCCCGGCGGGAGAGCTGTAGGCACCATCA1517290.11261775974106994No Hit
ATTGTAATTTTAACACGCGCTGGACTGTAGGCACCATCAATAGATCGGAA1506740.11183470747995419No Hit
ATTAAATCAGTTATAGTTTATTTGATACTGTAGGCACCATCAATAGATCG1479020.109777246941743No Hit
ACCGGCCGGCGGCTTTCAGCATCCGGGTGCTGTAGGCACCATCAATAGAT1468990.10903279062145953No Hit
AGTTATAGTTTATTTGATAGTACCCTGTAGGCACCATCAATAGATCGGAA1454950.1079907002189889No Hit
AGTTGGTGGAGTGATTTGTCTGCTGTAGGCACCATCAATAGATCGGAAGA1416700.10515167187892477No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)