FastQCFastQC Report
Sat 16 Sept 2023
SRR15359377_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR15359377_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences73968500
Total Bases3.7 Gbp
Sequences flagged as poor quality0
Sequence length51
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATA1878109925.390671704847335No Hit
TGTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAATAGAT65256238.822164840438836No Hit
ATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGATCG31328584.235394796433617No Hit
ATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGATCGG26795613.622570418488951No Hit
TGTTTTTTTACTTATTCAATTAAGCGGGGCCTGTAGGCACCATCAATAGA17452402.3594367872810724No Hit
TTTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATA14393711.9459242785780433No Hit
TTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATAG12021371.62520126810737No Hit
TTGTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAATAGA7050880.9532273873337975No Hit
TGTAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAG6756390.9134144940075843No Hit
TGTAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGA6458400.8731284262895692No Hit
GTGTAGCGGTAACATCGTTGACTGTAGGCACCATCAATAGATCGGAAGAG4088330.5527123032101503No Hit
AGTATCCTTTCATTCTTATGTGGGGGACTGTAGGCACCATCAATAGATCG3329060.45006455450631017No Hit
TGTAGCGGTAACATCGTTGACTGTAGGCACCATCAATAGATCGGAAGAGC3103050.41950965613740987No Hit
CGATGGGCCCCGCGTTCGATTCGCGGCTGGCGCCTGTAGGCACCATCAAT3000370.4056280714087754No Hit
ATCGATGGGCCCCGCGTTCGATTCGCGGCTGGCGCCTGTAGGCACCATCA2998490.405373909164036No Hit
TCGTCCAACTTCTGGTTTTAAGGTCCTCTGTAGGCACCATCAATAGATCG2349760.31767035968013413No Hit
TATTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT2330740.3150989948423991No Hit
TTGTTTTTTTACTTATTCAATTAAGCGGGGCCTGTAGGCACCATCAATAG2220380.3001791303054679No Hit
ATGGGCCCCGCGTTCGATTCGCGGCTGGCGCCTGTAGGCACCATCAATAG2166300.29286790998871143No Hit
TCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATAGA2137530.2889784164880997No Hit
TTGGGTCGGGCCTTTTTTCCTGGAGAACCGCCTGTAGGCACCATCAATAG1951300.2638014830637366No Hit
TGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGATCGG1928060.26065960510217184No Hit
GTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAATAGATC1908940.2580747209960997No Hit
TATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGATC1786710.24155011930754305No Hit
AAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGAT1766100.23876379810324663No Hit
ATTCTGGCGAGCATGCCTGTTCGAGCGTCATTTCTGTAGGCACCATCAAT1751020.23672509243799728No Hit
GATGGGCCCCGCGTTCGATTCGCGGCTGGCGCCTGTAGGCACCATCAATA1733030.23429297606413543No Hit
GTCTAGTGGTATGATTCGCCTGTAGGCACCATCAATAGATCGGAAGAGCA1581270.21377613443560434No Hit
AATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGATC1538950.20805478007530231No Hit
ATTCTGGCGAGCATGCCTGTTCGAGCGTCCTGTAGGCACCATCAATAGAT1538710.20802233383129307No Hit
TCGATGGGCCCCGCGTTCGATTCGCGGCTGGCGCCTGTAGGCACCATCAA1519820.20546854404239642No Hit
TAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGAT1519060.20536579760303372No Hit
GTTTAGTGGTAAAATCCATCGTCTGTAGGCACCATCAATAGATCGGAAGA1501450.2029850544488532No Hit
GCCAAGGATGTTTTCATTAATCAGGAACGACTGTAGGCACCATCAATAGA1425580.1927279855614214No Hit
ATAGATGTGCATAGTTAAACCGATCATTACTGTAGGCACCATCAATAGAT1369370.18512880482908264No Hit
GTCTAGTGGTATGATTCTCGCTTCTGTAGGCACCATCAATAGATCGGAAG1352070.18278997140674746No Hit
ATCGATGGGCCCCGCGTTCGATTCGCGGCTGGCGCTGTAGGCACCATCAA1325280.17916815941921224No Hit
TAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGATC1301010.1758870329937744No Hit
TCTTCCGTAGTATAGTGGTCAGTATGTGAGCCTGTAGGCACCATCAATAG1246760.1685528299208447No Hit
TTGGGTCGGGCCTTTTTTCCTGGAGAACCGCTGTAGGCACCATCAATAGA1244380.1682310713344194No Hit
GTGTAGTTGGTTATCACGTCAGTCTGTAGGCACCATCAATAGATCGGAAG1236880.16721712620912957No Hit
GTCTAGTGGTATGATTTCTGTCTGTAGGCACCATCAATAGATCGGAAGAG1231380.1664735664505837No Hit
ATTCTGGCGAGCATGCCTGTTCGAGCCTGTAGGCACCATCAATAGATCGG1222090.16521762642205803No Hit
ACTATGCCGATTAGGGATCGGACGGTGTCTGTAGGCACCATCAATAGATC1202580.1625800171694708No Hit
TTTAGTGGTAAAATCCATCGTCTGTAGGCACCATCAATAGATCGGAAGAG1159280.15672617397946423No Hit
AATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGATCG1146970.15506195204715523No Hit
GTAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGA1140950.1542480920932559No Hit
TGTTTTTTTACTTATTCAATTAAGCGGGGCTGGCTGTAGGCACCATCAAT1109560.1500043937622096No Hit
ATAGTAGGCAATTTAAGTAACATCTTACTGTAGGCACCATCAATAGATCG1101290.14888635027072333No Hit
ACTGACTGGGTCGGGCCTTTTTTCCTGGACTGTAGGCACCATCAATAGAT1100180.14873628639218045No Hit
TCGTCCAACTTCTGGTTTTAAGGTCCTTCTGTAGGCACCATCAATAGATC1096900.14829285439072037No Hit
AAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGATC1088900.14721131292374456No Hit
GTAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGAT1054000.1424930882740626No Hit
TTGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGATCG982560.13283492297396865No Hit
TCGGGTATGGTGTAGCGGTAACATCGTTGACTGTAGGCACCATCAATAGA936760.12664309807553217No Hit
CGATGGGCCCCGCGTTCGATTCGCGGCTGGCGCTGTAGGCACCATCAATA923130.12480042180117211No Hit
TCAACAGCCCCGGGTTCGACTCCCGGTATCCGACTGTAGGCACCATCAAT902980.12207628923122682No Hit
ATAGATGTGCATAGTTAAACCGATCATTCTGTAGGCACCATCAATAGATC884180.11953466678383366No Hit
CGAGAGGACCCAGGTTCGATTCCTGGCAATCCCCTGTAGGCACCATCAAT881480.11916964653872933No Hit
ATCGATGAAGAACGCAGCGAAATGCGATCTGTAGGCACCATCAATAGATC855070.11559920777087544No Hit
CGCTCGAGACCCGGGTTCAATTCCCGGCGGGAGAGCTGTAGGCACCATCA830830.11232213712593873No Hit
TCGAGAGGACCCAGGTTCGATTCCTGGCAATCCCCTGTAGGCACCATCAA829400.11212881158871682No Hit
CGCTCGAGACCCGGGTTCAATTCCCGGCGGGAGACTGTAGGCACCATCAA794760.10744573703671156No Hit
TCAACAGCCCCGGGTTCGACTCCCGGTATCCGCTGTAGGCACCATCAATA764240.10331965634019886No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)