FastQCFastQC Report
Sat 16 Sept 2023
SRR15359381_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR15359381_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences119693731
Total Bases6.1 Gbp
Sequences flagged as poor quality0
Sequence length51
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATA3686804430.801984107254537No Hit
TGTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAATAGAT76057976.354382085390922No Hit
ATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGATCGG34910952.916689930903733No Hit
TTTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATA30235242.526050424478789No Hit
ATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGATCG29866442.4952384515443002No Hit
TTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATAG23016801.92297456246894No Hit
TGTTTTTTTACTTATTCAATTAAGCGGGGCCTGTAGGCACCATCAATAGA10650820.8898394185740606No Hit
TTGTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAATAGA10082780.8423816281572842No Hit
GTGTAGCGGTAACATCGTTGACTGTAGGCACCATCAATAGATCGGAAGAG9048710.7559886323536861No Hit
GTCTAGTGGTATGATTCGCCTGTAGGCACCATCAATAGATCGGAAGAGCA8042300.6719065345201747No Hit
TGTAGCGGTAACATCGTTGACTGTAGGCACCATCAATAGATCGGAAGAGC6705380.5602114617013652No Hit
TGTAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGA6249310.522108380095529No Hit
TCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATAGA5969030.49869194903783226No Hit
AGTATCCTTTCATTCTTATGTGGGGGACTGTAGGCACCATCAATAGATCG5807400.4851883178409736No Hit
TGTAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAG5541750.462994173019805No Hit
TCGTCCAACTTCTGGTTTTAAGGTCCTCTGTAGGCACCATCAATAGATCG5092490.4254600435172331No Hit
TATTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT4651040.3885784126822816No Hit
CGATGGGCCCCGCGTTCGATTCGCGGCTGGCGCCTGTAGGCACCATCAAT4493050.3753788909796788No Hit
ACTATGCCGATTAGGGATCGGACGGTGTCTGTAGGCACCATCAATAGATC4320470.36096042490312213No Hit
GTGTAGTTGGTTATCACGTCAGTCTGTAGGCACCATCAATAGATCGGAAG3477690.2905490513951813No Hit
TCTTCCGTAGTATAGTGGTCAGTATGTGAGCCTGTAGGCACCATCAATAG2981990.24913501944391725No Hit
GTCTAGTGGTATGATTCTCGCTTCTGTAGGCACCATCAATAGATCGGAAG2864690.2393350074449597No Hit
ATTCTGGCGAGCATGCCTGTTCGAGCGTCATTTCTGTAGGCACCATCAAT2727510.22787408974660503No Hit
GTTTAGTGGTAAAATCCATCGTCTGTAGGCACCATCAATAGATCGGAAGA2528630.21125834902748583No Hit
TGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGATCGG2419040.20210248103971293No Hit
GATGGGCCCCGCGTTCGATTCGCGGCTGGCGCCTGTAGGCACCATCAATA2334110.19500687132895875No Hit
ATTCTGGCGAGCATGCCTGTTCGAGCGTCCTGTAGGCACCATCAATAGAT2295310.19176526463194635No Hit
TATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGATC2290240.1913416835506615No Hit
ATTAAATCAGTTATAGTTTATTTGATACTGTAGGCACCATCAATAGATCG2258580.18869659932315086No Hit
GTGTAGCGGTAACATCGTTGACCTGTAGGCACCATCAATAGATCGGAAGA2241930.18730554902662364No Hit
TCGTCCAACTTCTGGTTTTAAGGTCCTTCTGTAGGCACCATCAATAGATC2176510.18183993278645477No Hit
ACTATGCCGATTAGGGATCGGACGGTGCTGTAGGCACCATCAATAGATCG2110160.1762966182414349No Hit
TCGGGTATGGTGTAGCGGTAACATCGTTGACTGTAGGCACCATCAATAGA2067690.172748395653236No Hit
GTCTAGTGGTATGATTTCTGTCTGTAGGCACCATCAATAGATCGGAAGAG2040270.1704575488585948No Hit
TCGATGGGCCCCGCGTTCGATTCGCGGCTGGCGCCTGTAGGCACCATCAA1906370.15927066389132777No Hit
AAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGAT1889180.1578344984500483No Hit
ATAGATGTGCATAGTTAAACCGATCATTACTGTAGGCACCATCAATAGAT1851380.15467643831739192No Hit
ATAGTAGGCAATTTAAGTAACATCTTACTGTAGGCACCATCAATAGATCG1810390.1512518646444399No Hit
GTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAATAGATC1761630.14717813416644185No Hit
ATGGGCCCCGCGTTCGATTCGCGGCTGGCGCCTGTAGGCACCATCAATAG1753300.14648219128535644No Hit
ATTTGAGTAAGAGCGTTAAGCCTTGGCTGTAGGCACCATCAATAGATCGG1677200.14012429773786567No Hit
ATCGGTAGAGCTTGAGACTGTAGGCACCATCAATAGATCGGAAGAGCACA1666860.1392604262624247No Hit
GCTCAGTTGGTAGAGCTTTCGCCTGTAGGCACCATCAATAGATCGGAAGA1663840.13900811563806964No Hit
AAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGATC1625910.13583919445204695No Hit
CTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATAGAT1608560.13438966156047052No Hit
TTTAGTGGTAAAATCCATCGTCTGTAGGCACCATCAATAGATCGGAAGAG1607610.13431029232433234No Hit
TTGTTTTTTTACTTATTCAATTAAGCGGGGCCTGTAGGCACCATCAATAG1605940.13417076956185783No Hit
GTCTAGTGGTATGATTTCCCTGTAGGCACCATCAATAGATCGGAAGAGCA1596170.13335451962809983No Hit
ATAGTAGGCAATTTAAGTAACATCTTAGCTGTAGGCACCATCAATAGATC1478470.12352108900339986No Hit
ATTCTGGCGAGCATGCCTGTTCGAGCGTCATTCCGTAGGCACCATCAATA1445530.12076906517351357No Hit
GCGCAACGGTAGCGCTTTCGACTGTAGGCACCATCAATAGATCGGAAGAG1435540.11993443499559722No Hit
ACCGGCCGGCGGCTTTCAGCATCCGGGTCTGTAGGCACCATCAATAGATC1435110.11989850997292414No Hit
ATAGATGTGCATAGTTAAACCGATCATTCTGTAGGCACCATCAATAGATC1399250.11690253017511837No Hit
AATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGATC1395610.11659842068086257No Hit
GTGTAGCGGTAACATCGTTGCTGTAGGCACCATCAATAGATCGGAAGAGC1381820.11544631355839347No Hit
TTGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGATCG1336350.11164745127712661No Hit
TAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGATC1332650.11133832898900944No Hit
AATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGATCG1331690.1112581242872277No Hit
CGATGGGCCCCGCGTTCGATTCGCGGCTGGCGCTGTAGGCACCATCAATA1330930.11119462889831716No Hit
TTGGGTCGGGCCTTTTTTCCTGGAGAACCGCTGTAGGCACCATCAATAGA1286040.10744422362437679No Hit
ATCGATGAAGAACGCAGCGAAATGCGATCTGTAGGCACCATCAATAGATC1263660.10557445151408973No Hit
TAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGAT1248750.10432877223954193No Hit
GTTTAGTGGTAAAATCCACTGTAGGCACCATCAATAGATCGGAAGAGCAC1201090.10034694298233547No Hit
GTCTAGTGGTATGATTTCTGCTGTAGGCACCATCAATAGATCGGAAGAGC1198310.10011468353342583No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)