FastQCFastQC Report
Sat 16 Sept 2023
SRR15359382_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR15359382_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences69431104
Total Bases3.5 Gbp
Sequences flagged as poor quality0
Sequence length51
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAATAGAT44449606.4019722342309295No Hit
ATTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATA30520844.395845412453761No Hit
TTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATAG18608292.680108615297259No Hit
GTGTAGCGGTAACATCGTTGACTGTAGGCACCATCAATAGATCGGAAGAG14693252.116234533732893No Hit
TTTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATA14169862.040851892546603No Hit
ATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGATCG10366631.4930815445481034No Hit
TGTTTTTTTACTTATTCAATTAAGCGGGGCCTGTAGGCACCATCAATAGA8760101.2616967749785455No Hit
CGATGGGCCCCGCGTTCGATTCGCGGCTGGCGCCTGTAGGCACCATCAAT7891291.1365640966907282No Hit
ATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGATCGG7846611.130128940481776No Hit
CTGGAGATAGGGTTTAATGGCCGGCTGTAGGCACCATCAATAGATCGGAA7589061.0930346145727425No Hit
TGTAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGA6708720.9662412972721851No Hit
TGTAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAG6619040.9533248960005014No Hit
TCGATGGGCCCCGCGTTCGATTCGCGGCTGGCGCCTGTAGGCACCATCAA6003620.8646873885225849No Hit
GTTTAGTGGTAAAATCCATCGTCTGTAGGCACCATCAATAGATCGGAAGA5709900.8223835818597959No Hit
AGTATCCTTTCATTCTTATGTGGGGGACTGTAGGCACCATCAATAGATCG5375490.7742192893836168No Hit
TCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATAGA5102470.7348968554496843No Hit
GTCTAGTGGTATGATTCGCCTGTAGGCACCATCAATAGATCGGAAGAGCA4247100.6116999090206027No Hit
TCGTCCAACTTCTGGTTTTAAGGTCCTCTGTAGGCACCATCAATAGATCG4080310.5876775342647583No Hit
ACCGGCCGGCGGCTTTCAGCATCCGGGTCTGTAGGCACCATCAATAGATC3930780.5661410770596418No Hit
TCGTCCAACTTCTGGTTTTAAGGTCCCTGTAGGCACCATCAATAGATCGG3917680.5642543146080465No Hit
GTGTAGCGGTAACATCGTTGACCTGTAGGCACCATCAATAGATCGGAAGA3592050.5173545850574405No Hit
TCCAACTTCTGGTTTTAAGGTCCTCTGTAGGCACCATCAATAGATCGGAA3559710.5126967302723575No Hit
GTCTAGTGGTATGATTCTCGCTTCTGTAGGCACCATCAATAGATCGGAAG3487060.5022331201877476No Hit
TGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGATCGG3176900.45756149866204054No Hit
TGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGATCGGA2822610.40653393614481487No Hit
GTGTAGTTGGTTATCACGTCAGTCTGTAGGCACCATCAATAGATCGGAAG2735720.39401937206702053No Hit
AAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGAT2597930.3741737996849366No Hit
ATATATCAAATCATCTTTATGCTATTCTGTAGGCACCATCAATAGATCGG2540380.36588500738804325No Hit
TGGGTCGGGCCTTTTTTCCTGGACTGTAGGCACCATCAATAGATCGGAAG2432130.35029401232047236No Hit
TTGTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAATAGA2428400.34975678911860597No Hit
TATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGATC2190930.31555453878423134No Hit
CCAACTTCTGGTTTTAAGGTCCTTCTGTAGGCACCATCAATAGATCGGAA2161180.3112697156594255No Hit
GTCTAGTGGTATGATTTCTGTCTGTAGGCACCATCAATAGATCGGAAGAG2109750.30386237269106364No Hit
TATTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT2104680.3031321524139959No Hit
AAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGATC2090370.3010711164840473No Hit
TCGATGGGCCCCGCGTTCGATTCGCGGCTGGCGCTGTAGGCACCATCAAT1989110.2864868748162207No Hit
ACTATGCCGATTAGGGATCGGACGGTGTCTGTAGGCACCATCAATAGATC1960100.2823086321657797No Hit
CGATGGGCCCCGCGTTCGATTCGCGGCTGGCGCTGTAGGCACCATCAATA1926660.2774923469458299No Hit
TCTTCCGTAGTATAGTGGTCAGTATGTGAGCCTGTAGGCACCATCAATAG1878730.27058910081568055No Hit
TCCAACTTCTGGTTTTAAGGTCCTTCTGTAGGCACCATCAATAGATCGGA1873050.2697710236610958No Hit
TCGTCCAACTTCTGGTTTTAAGGTCCTGTAGGCACCATCAATAGATCGGA1797870.25894302357629223No Hit
TATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGATCG1640410.23626442696345432No Hit
ATCGATGGGCCCCGCGTTCGATTCGCGGCTGGCGCCTGTAGGCACCATCA1515120.2182192004321291No Hit
TTGGGTCGGGCCTTTTTTCCTGGACTGTAGGCACCATCAATAGATCGGAA1387920.19989888105480794No Hit
TAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGAT1344760.1936826469013081No Hit
TGGGTCGGGCCTTTTTTCCTGGAGAACCGCTGTAGGCACCATCAATAGAT1343060.19343779986560491No Hit
TCCGGGTGCAGAAGCCCTTAGCAGACTCTGTAGGCACCATCAATAGATCG1328340.1913177125917514No Hit
ACCAGCGAATCCCTGGTGTTGTATGTCTGTAGGCACCATCAATAGATCGG1314340.18930132523890159No Hit
ATTAAATCAGTTATAGTTTATTTGATACTGTAGGCACCATCAATAGATCG1292090.186096709624551No Hit
TAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGATC1290370.18584898203548658No Hit
GTAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGAT1264300.1820941807291441No Hit
CGCTCGAGACCCGGGTTCAATTCCCGGCGGGAGACTGTAGGCACCATCAA1217430.17534360392713905No Hit
GTGTAGCGGTAACATCGTTGCTGTAGGCACCATCAATAGATCGGAAGAGC1176370.16942982787656666No Hit
TCGTCCAACTTCTGGTTTTAAGGTCCTTCTGTAGGCACCATCAATAGATC1155320.16639804546388892No Hit
GTTTAGTGGTAAAATCCATCGTTCTGTAGGCACCATCAATAGATCGGAAG1140540.16426931652995175No Hit
CGCTCGAGACCCGGGTTCAATTCCCGGCGGGAGAGCCTGTAGGCACCATC1137720.16386315850602057No Hit
ATATCAAATCATCTTTATGCTATTCTGTAGGCACCATCAATAGATCGGAA1112850.16028119040135097No Hit
CGAGAGGACCCAGGTTCGATTCCTGGCAATCCCCTGTAGGCACCATCAAT1104680.15910448435329502No Hit
TGTTTTTTTACTTATTCAATTAAGCGGGGCTGGCTGTAGGCACCATCAAT1094150.15758787300861585No Hit
CTGGAGATAGGGTTTAATGGCCGCTGTAGGCACCATCAATAGATCGGAAG1086820.15653215020173092No Hit
GTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAATAGATC1051160.1513961235586863No Hit
CTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATAGAT1048770.15105189743202124No Hit
TTATATATCAAATCATCTTTATGCTATTCTGTAGGCACCATCAATAGATC1021950.14718907537463324No Hit
ACTATGCCGATTAGGGATCGGACGGTGCTGTAGGCACCATCAATAGATCG993830.14313901734876633No Hit
CCAGCGAATCCCTGGTGTTGTATGTCTGTAGGCACCATCAATAGATCGGA988750.14240735679501798No Hit
GTCTAGTGGTATGATTCTCGCCTGTAGGCACCATCAATAGATCGGAAGAG988200.1423281415775846No Hit
GTAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGA985930.1420011987710868No Hit
TCGGGTATGGTGTAGCGGTAACATCGTTGACTGTAGGCACCATCAATAGA972670.1400913918926019No Hit
TCTGGAGATAGGGTTTAATGGCCGGCTGTAGGCACCATCAATAGATCGGA971910.1399819308648758No Hit
TATTGTAATTTTAACACGCGCTGGACTGTAGGCACCATCAATAGATCGGA965990.13912928706995642No Hit
TGTCCAACTTCTGGTTTTAAGGTCCTCTGTAGGCACCATCAATAGATCGG907700.13073391429869816No Hit
CGATGGGCCCCGCGTTCGATTCGCGGCTGGCGCACCTGTAGGCACCATCA905800.13046026172938285No Hit
TTGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGATCG894460.12882698797357447No Hit
GTATCCTTTCATTCTTATGTGGGGGACTGTAGGCACCATCAATAGATCGG894320.12880682410004599No Hit
TCAACAGCCCCGGGTTCGACTCCCGGTATCCGACTGTAGGCACCATCAAT876720.12627193714217766No Hit
GTTTAGTGGTAAAATCCATCGCTGTAGGCACCATCAATAGATCGGAAGAG875980.12616535666781273No Hit
TAGAGGTTATCAACATATGAACTCTCTGTAGGCACCATCAATAGATCGGA875700.12612502892075575No Hit
TATATCAAATCATCTTTATGCTATTCTGTAGGCACCATCAATAGATCGGA855440.12320702836584593No Hit
TGGGTCGGGCCTTTTTTCCTGGAGCTGTAGGCACCATCAATAGATCGGAA854400.12305723959106282No Hit
TGCTCGAGACCCGGGTTCAATTCCCGGCGGGAGACTGTAGGCACCATCAA832200.11985982536011526No Hit
CAGTATCCTTTCATTCTTATGTGGGGGACTGTAGGCACCATCAATAGATC830130.11956168808722961No Hit
GCTCAGTTGGTAGAGCTTTCGCCTGTAGGCACCATCAATAGATCGGAAGA824020.11868167903537873No Hit
GTGTAGCGGTAACATCGTTGACTCTGTAGGCACCATCAATAGATCGGAAG821230.11827984184148937No Hit
GCGTATTGTAATTTTAACACGCGCTGGACTGTAGGCACCATCAATAGATC819230.11799178650536797No Hit
AGCATCCGGGTGCAGAAGCCCTTAGCCTGTAGGCACCATCAATAGATCGG788390.11354997322237596No Hit
ATTGTAATTTTAACACGCGCTGGACTGTAGGCACCATCAATAGATCGGAA780700.11244240045498917No Hit
TTGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGATCGG771600.1111317486756368No Hit
GTCTAGTGGTATGATTTCCCTGTAGGCACCATCAATAGATCGGAAGAGCA752220.1083404924686204No Hit
GTCTAGTGGTATGATTCTCGCTCTGTAGGCACCATCAATAGATCGGAAGA745830.10742015566971254No Hit
ACCGGCCGGCGGCTTTCAGCATCCGGGCTGTAGGCACCATCAATAGATCG720860.10382378479823681No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)