FastQCFastQC Report
Fri 15 Sept 2023
SRR15359385_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR15359385_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences74400709
Total Bases3.7 Gbp
Sequences flagged as poor quality0
Sequence length51
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAATAGAT52436227.047811869642263No Hit
TGTTTTTTTACTTATTCAATTAAGCGGGGCCTGTAGGCACCATCAATAGA24652793.3135154666335236No Hit
ATTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATA23618153.174452275716889No Hit
GTGTAGCGGTAACATCGTTGACTGTAGGCACCATCAATAGATCGGAAGAG14289691.9206389552013543No Hit
TTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATAG11515421.547756755920162No Hit
TTTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATA10505311.4119905765951772No Hit
ATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGATCG10126251.361042137380707No Hit
TGTAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAG9028391.2134817156110704No Hit
CTGGAGATAGGGTTTAATGGCCGGCTGTAGGCACCATCAATAGATCGGAA8164101.0973148118790106No Hit
TCCGGGTGCAGAAGCCCTTAGCAGACTCTGTAGGCACCATCAATAGATCG7276680.9780390668051295No Hit
TGTAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGA7225970.9712232715416731No Hit
ATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGATCGG6845820.9201283283469786No Hit
TCGATGGGCCCCGCGTTCGATTCGCGGCTGGCGCCTGTAGGCACCATCAA6488330.872079055053091No Hit
TCGTCCAACTTCTGGTTTTAAGGTCCCTGTAGGCACCATCAATAGATCGG6413900.8620751181282426No Hit
CGATGGGCCCCGCGTTCGATTCGCGGCTGGCGCCTGTAGGCACCATCAAT5734750.770792385862882No Hit
TCGTCCAACTTCTGGTTTTAAGGTCCTCTGTAGGCACCATCAATAGATCG5645330.7587736831916481No Hit
GTTTAGTGGTAAAATCCATCGTCTGTAGGCACCATCAATAGATCGGAAGA5218180.7013615958955445No Hit
TCCAACTTCTGGTTTTAAGGTCCTCTGTAGGCACCATCAATAGATCGGAA5210240.7002944017643703No Hit
ACTATGCCGATTAGGGATCGGACGGTGTCTGTAGGCACCATCAATAGATC4807750.6461967990116868No Hit
AGTATCCTTTCATTCTTATGTGGGGGACTGTAGGCACCATCAATAGATCG4774990.6417936151656835No Hit
ACCGGCCGGCGGCTTTCAGCATCCGGGTCTGTAGGCACCATCAATAGATC4648040.6247306057258137No Hit
TTGGGTCGGGCCTTTTTTCCTGGACTGTAGGCACCATCAATAGATCGGAA3793900.5099279363050155No Hit
CTATGCCGATTAGGGATCGGACGGTGTCTGTAGGCACCATCAATAGATCG3746100.5035032663465613No Hit
TCGTCCAACTTCTGGTTTTAAGGTCCTGTAGGCACCATCAATAGATCGGA3701500.49750869981628804No Hit
TCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATAGA3495950.46988127492172155No Hit
ACTATGCCGATTAGGGATCGGACGGTGCTGTAGGCACCATCAATAGATCG3307050.44449173192690944No Hit
AGCATCCGGGTGCAGAAGCCCTTAGCCTGTAGGCACCATCAATAGATCGG3260410.4382229744611708No Hit
ATATATCAAATCATCTTTATGCTATTCTGTAGGCACCATCAATAGATCGG3179650.4273682391924518No Hit
TGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGATCGGA3150350.42343010467816916No Hit
TTGTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAATAGA3057060.41089124567347873No Hit
TGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGATCGG2924950.3931346944556671No Hit
CCAACTTCTGGTTTTAAGGTCCTTCTGTAGGCACCATCAATAGATCGGAA2858920.3842597790297939No Hit
TATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGATC2833470.38083911270254156No Hit
GCATCCGGGTGCAGAAGCCCTTAGCCTGTAGGCACCATCAATAGATCGGA2492480.3350075602102125No Hit
ATATCAAATCATCTTTATGCTATTCTGTAGGCACCATCAATAGATCGGAA2485410.334057300448575No Hit
TCGATGGGCCCCGCGTTCGATTCGCGGCTGGCGCTGTAGGCACCATCAAT2479490.3332616091064401No Hit
GTCTAGTGGTATGATTCTCGCTTCTGTAGGCACCATCAATAGATCGGAAG2423980.3258006587007121No Hit
GTCTAGTGGTATGATTCGCCTGTAGGCACCATCAATAGATCGGAAGAGCA2412370.3242401897003428No Hit
TCCAACTTCTGGTTTTAAGGTCCTTCTGTAGGCACCATCAATAGATCGGA2404070.3231246089334982No Hit
GTGTAGTTGGTTATCACGTCAGTCTGTAGGCACCATCAATAGATCGGAAG2258690.3035844725619483No Hit
TCGTCCAACTTCTGGTTTTAAGGTCCTTCTGTAGGCACCATCAATAGATC2218020.2981181268044099No Hit
GTCTAGTGGTATGATTTCTGTCTGTAGGCACCATCAATAGATCGGAAGAG2185650.29376736181371604No Hit
TATTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT2161490.2905200809309492No Hit
AAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGAT2146850.2885523577470209No Hit
TATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGATCG1931540.2596131173965022No Hit
GTGTAGCGGTAACATCGTTGACCTGTAGGCACCATCAATAGATCGGAAGA1691590.22736208064898952No Hit
AAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGATC1656910.2227008347460775No Hit
TTGGGTCGGGCCTTTTTTCCTGGAGCTGTAGGCACCATCAATAGATCGGA1649980.22176939200942292No Hit
CGATGGGCCCCGCGTTCGATTCGCGGCTGGCGCTGTAGGCACCATCAATA1609360.21630976661794984No Hit
TATATCAAATCATCTTTATGCTATTCTGTAGGCACCATCAATAGATCGGA1601870.21530305578136358No Hit
TGTCCAACTTCTGGTTTTAAGGTCCTCTGTAGGCACCATCAATAGATCGG1577890.2120799682164319No Hit
TTATATATCAAATCATCTTTATGCTATTCTGTAGGCACCATCAATAGATC1514880.2036109629009046No Hit
GTTTAGTGGTAAAATCCATCGTTCTGTAGGCACCATCAATAGATCGGAAG1503730.2021123212683363No Hit
TGGGTCGGGCCTTTTTTCCTGGACTGTAGGCACCATCAATAGATCGGAAG1497760.20130990956013606No Hit
TGTTTTTTTACTTATTCAATTAAGCGGGGCTGGCTGTAGGCACCATCAAT1473590.19806128460415612No Hit
CGAGAGGACCCAGGTTCGATTCCTGGCAATCCCCTGTAGGCACCATCAAT1424700.19149011066547766No Hit
CGCTCGAGACCCGGGTTCAATTCCCGGCGGGAGAGCTGTAGGCACCATCA1419510.19079253666789653No Hit
CTGGAGATAGGGTTTAATGGCCGCTGTAGGCACCATCAATAGATCGGAAG1402310.18848073074142346No Hit
TTGTTTTTTTACTTATTCAATTAAGCGGGGCCTGTAGGCACCATCAATAG1388780.1866621996841455No Hit
GCTCAGTTGGTAGAGCTTTCGCCTGTAGGCACCATCAATAGATCGGAAGA1352280.18175633245645548No Hit
TCTTCCGTAGTATAGTGGTCAGTATGTGAGCCTGTAGGCACCATCAATAG1337950.17983027554213227No Hit
GTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAATAGATC1326600.17830475244530264No Hit
CCAGCGAATCCCTGGTGTTGTATGTCTGTAGGCACCATCAATAGATCGGA1310310.17611525718121854No Hit
TCGATGGGCCCCGCGTTCGATTCGCGGCTGGCGCACTGTAGGCACCATCA1302250.17503193417148755No Hit
GCCAAGGATGTTTTCATTAATCAGGAACGACTGTAGGCACCATCAATAGA1292140.17367307615307806No Hit
TTATATCAAATCATCTTTATGCTATTCTGTAGGCACCATCAATAGATCGG1265040.17003063774566987No Hit
CGCTCGAGACCCGGGTTCAATTCCCGGCGGGAGACTGTAGGCACCATCAA1242020.1669365812091925No Hit
CTATGCCGATTAGGGATCGGACGGTGCTGTAGGCACCATCAATAGATCGG1238300.16643658597393204No Hit
AGCATCCGGGTGCAGAAGCCCTTAGCTGTAGGCACCATCAATAGATCGGA1231770.1655589061658001No Hit
CGATGGGCCCCGCGTTCGATTCGCGGCTGGCGCACTGTAGGCACCATCAA1215400.16335865831601148No Hit
TAGAGGTTATCAACATATGAACTCTCTGTAGGCACCATCAATAGATCGGA1184110.15915305323232873No Hit
TAGTTGGTGGAGTGATTTGTCTGCTGTAGGCACCATCAATAGATCGGAAG1122490.1508708740934176No Hit
TTGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGATCGG1104160.14840718789386806No Hit
GTAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGA1095530.14724725271099232No Hit
TCTGGAGATAGGGTTTAATGGCCGGCTGTAGGCACCATCAATAGATCGGA1092060.1467808593060585No Hit
ACCGGCCGGCGGCTTTCAGCATCCGGGTGCTGTAGGCACCATCAATAGAT1086380.14601742572103715No Hit
TAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGAT1073510.1442876034958215No Hit
TCTATGCCGATTAGGGATCGGACGGTGTCTGTAGGCACCATCAATAGATC1065830.14325535526818703No Hit
CAGTATCCTTTCATTCTTATGTGGGGGACTGTAGGCACCATCAATAGATC1064170.1430322391148181No Hit
TTGGGTCGGGCCTTTTTTCCTGGAGAACCGCCTGTAGGCACCATCAATAG1040510.13985216189270455No Hit
TTGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGATCG1033520.13891265471677158No Hit
TTCCAACTTCTGGTTTTAAGGTCCTCTGTAGGCACCATCAATAGATCGGA1027640.1381223396674889No Hit
CGCTCGAGACCCGGGTTCAATTCCCGGCGGGAGAGCCTGTAGGCACCATC1027610.13811830744784973No Hit
TAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGATC1024930.1377580958267481No Hit
GTAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGAT969670.13033074725134677No Hit
TGTCCAACTTCTGGTTTTAAGGTCCCTGTAGGCACCATCAATAGATCGGA949370.12760227862882328No Hit
TACCTGGTTGATTCTGCCAGTAGTCCTGTAGGCACCATCAATAGATCGGA944950.12700819826864823No Hit
AACTATGCCGATTAGGGATCGGACGGTGTCTGTAGGCACCATCAATAGAT942580.12668965291715162No Hit
ATTAAATCAGTTATAGTTTATTTGATACTGTAGGCACCATCAATAGATCG926750.12456198502086854No Hit
CGTCCAACTTCTGGTTTTAAGGTCCCTGTAGGCACCATCAATAGATCGGA903500.12143701480049067No Hit
TCGGGTATGGTGTAGCGGTAACATCGTTGACTGTAGGCACCATCAATAGA900190.12099212656696591No Hit
CCAACTTCTGGTTTTAAGGTCCTCTGTAGGCACCATCAATAGATCGGAAG873270.1173738814773929No Hit
GTATCCTTTCATTCTTATGTGGGGGACTGTAGGCACCATCAATAGATCGG869010.1168013062886269No Hit
TATTGTAATTTTAACACGCGCTGGACTGTAGGCACCATCAATAGATCGGA862310.11590077723587285No Hit
ATCGATGGGCCCCGCGTTCGATTCGCGGCTGGCGCCTGTAGGCACCATCA861240.11575696140207481No Hit
ACCGGCCGGCGGCTTTCAGCATCCGGGTGCCTGTAGGCACCATCAATAGA851170.1144034796765176No Hit
TCGAGAGGACCCAGGTTCGATTCCTGGCAATCCCCTGTAGGCACCATCAA851040.11438600672474773No Hit
CGTCCAACTTCTGGTTTTAAGGTCCTCTGTAGGCACCATCAATAGATCGG845150.11359434760225201No Hit
AGTTATAGTTTATTTGATAGTACCCTGTAGGCACCATCAATAGATCGGAA827420.11121130579548642No Hit
CTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATAGAT814320.1094505698863703No Hit
ACCAGCGAATCCCTGGTGTTGTATGTCTGTAGGCACCATCAATAGATCGG812570.10921535707408381No Hit
GTGTAGCGGTAACATCGTTGCTGTAGGCACCATCAATAGATCGGAAGAGC801050.10766698473263206No Hit
GTTTAGTGGTAAAATCCATCGCTGTAGGCACCATCAATAGATCGGAAGAG777170.10445733789983104No Hit
ATTGTAATTTTAACACGCGCTGGACTGTAGGCACCATCAATAGATCGGAA771850.10374229095048006No Hit
AAAATCAGTTATAGTTTATTTGATACTGTAGGCACCATCAATAGATCGGA767510.10315896317600953No Hit
TCAACAGCCCCGGGTTCGACTCCCGGTATCCGACTGTAGGCACCATCAAT757950.10187402918431865No Hit
TGGGTCGGGCCTTTTTTCCTGGAGCTGTAGGCACCATCAATAGATCGGAA749220.10070065326931227No Hit
CGAGAGGACCCAGGTTCGATTCCTGGCAATCCCTGTAGGCACCATCAATA745940.10025979725542669No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)