FastQCFastQC Report
Sat 16 Sept 2023
SRR15359387_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR15359387_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences78116776
Total Bases3.9 Gbp
Sequences flagged as poor quality0
Sequence length51
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAATAGAT65328038.362868175716827No Hit
ATTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATA42337915.419823009592715No Hit
TGTTTTTTTACTTATTCAATTAAGCGGGGCCTGTAGGCACCATCAATAGA28904053.7001078999983306No Hit
TTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATAG20756752.6571437100783575No Hit
TTTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATA20102902.5734420990441285No Hit
ATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGATCG15580181.9944729925874052No Hit
GTGTAGCGGTAACATCGTTGACTGTAGGCACCATCAATAGATCGGAAGAG12473231.596741524509409No Hit
TCGATGGGCCCCGCGTTCGATTCGCGGCTGGCGCCTGTAGGCACCATCAA12153641.555829697835968No Hit
CGATGGGCCCCGCGTTCGATTCGCGGCTGGCGCCTGTAGGCACCATCAAT10607091.3578504571156393No Hit
ATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGATCGG9708481.2428162677886245No Hit
TCGTCCAACTTCTGGTTTTAAGGTCCTCTGTAGGCACCATCAATAGATCG8923801.1423666537390125No Hit
GTTTAGTGGTAAAATCCATCGTCTGTAGGCACCATCAATAGATCGGAAGA8566451.0966210382261552No Hit
TGTAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAG8384131.0732816213510912No Hit
ACTATGCCGATTAGGGATCGGACGGTGTCTGTAGGCACCATCAATAGATC7553930.9670048338912502No Hit
TGTAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGA7288750.9330582204263014No Hit
AGTATCCTTTCATTCTTATGTGGGGGACTGTAGGCACCATCAATAGATCG5989200.7666983081841472No Hit
TCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATAGA5095840.6523361896041383No Hit
TCGATGGGCCCCGCGTTCGATTCGCGGCTGGCGCTGTAGGCACCATCAAT5039420.6451136693096499No Hit
TTGTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAATAGA4556820.58333436597537No Hit
TGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGATCGG4283340.5483252406627739No Hit
GTGTAGTTGGTTATCACGTCAGTCTGTAGGCACCATCAATAGATCGGAAG4253650.5445245205716119No Hit
TATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGATC4069350.5209316370148199No Hit
TATTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT3672880.4701781343357027No Hit
AAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGAT3585160.458948792254304No Hit
GTCTAGTGGTATGATTCTCGCTTCTGTAGGCACCATCAATAGATCGGAAG3562100.4559968015065035No Hit
CGATGGGCCCCGCGTTCGATTCGCGGCTGGCGCTGTAGGCACCATCAATA3380690.43277387689425384No Hit
ACTATGCCGATTAGGGATCGGACGGTGCTGTAGGCACCATCAATAGATCG3313830.4242148959142912No Hit
ATATATCAAATCATCTTTATGCTATTCTGTAGGCACCATCAATAGATCGG3312120.4239959928709808No Hit
AAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGATC3217930.4119384036023197No Hit
TCGTCCAACTTCTGGTTTTAAGGTCCTTCTGTAGGCACCATCAATAGATC3103250.39725781821820194No Hit
GTCTAGTGGTATGATTTCTGTCTGTAGGCACCATCAATAGATCGGAAGAG2650760.33933300063484445No Hit
TATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGATCG2494740.31936033816859005No Hit
GTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAATAGATC2058550.2635221402378408No Hit
GTGTAGCGGTAACATCGTTGACCTGTAGGCACCATCAATAGATCGGAAGA1988970.2546149626041915No Hit
TCGATGGGCCCCGCGTTCGATTCGCGGCTGGCGCACTGTAGGCACCATCA1978950.25333226757847765No Hit
ACCGGCCGGCGGCTTTCAGCATCCGGGTGCTGTAGGCACCATCAATAGAT1958330.25069262971119033No Hit
ACCGGCCGGCGGCTTTCAGCATCCGGGTGCCTGTAGGCACCATCAATAGA1931490.24725674802554576No Hit
TTGTTTTTTTACTTATTCAATTAAGCGGGGCCTGTAGGCACCATCAATAG1864530.23868496569802114No Hit
TTATATATCAAATCATCTTTATGCTATTCTGTAGGCACCATCAATAGATC1810360.23175047572367807No Hit
GTTTAGTGGTAAAATCCATCGTTCTGTAGGCACCATCAATAGATCGGAAG1722850.22054801647215957No Hit
TCGTCCAACTTCTGGTTTTAAGGTCCCTGTAGGCACCATCAATAGATCGG1715360.21958919553976475No Hit
CGCTCGAGACCCGGGTTCAATTCCCGGCGGGAGACTGTAGGCACCATCAA1710800.21900545409093689No Hit
TCTTCCGTAGTATAGTGGTCAGTATGTGAGCCTGTAGGCACCATCAATAG1652640.21156019034886947No Hit
TTGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGATCG1649790.21119535194335212No Hit
CGATGGGCCCCGCGTTCGATTCGCGGCTGGCGCACTGTAGGCACCATCAA1637500.20962206632798053No Hit
GTATCCTTTCATTCTTATGTGGGGGACTGTAGGCACCATCAATAGATCGG1586930.20314842486587004No Hit
GCCAAGGATGTTTTCATTAATCAGGAACGACTGTAGGCACCATCAATAGA1521910.19482498868104847No Hit
GCTCAGTTGGTAGAGCTTTCGCCTGTAGGCACCATCAATAGATCGGAAGA1513780.19378423912425674No Hit
AGCATCCGGGTGCAGAAGCCCTTAGCCTGTAGGCACCATCAATAGATCGG1484770.19007056819651647No Hit
TCAACAGCCCCGGGTTCGACTCCCGGTATCCGACTGTAGGCACCATCAAT1469140.18806971757257368No Hit
CGAGAGGACCCAGGTTCGATTCCTGGCAATCCCCTGTAGGCACCATCAAT1452180.18589860902605607No Hit
TAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGATC1427600.182752037795313No Hit
TTGGGTCGGGCCTTTTTTCCTGGAGAACCGCCTGTAGGCACCATCAATAG1411360.18067309895124192No Hit
CGCTCGAGACCCGGGTTCAATTCCCGGCGGGAGAGCTGTAGGCACCATCA1351260.17297948906647145No Hit
GTCTAGTGGTATGATTCGCCTGTAGGCACCATCAATAGATCGGAAGAGCA1312500.1680176867514348No Hit
TAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGAT1303760.1668988489745148No Hit
GTAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAATAGA1296710.16599635397139278No Hit
ATCGATGGGCCCCGCGTTCGATTCGCGGCTGGCGCCTGTAGGCACCATCA1253620.1604802533069209No Hit
GTAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGAT1247870.1597441758221051No Hit
TGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAATAGATCGGA1172920.15014956582437555No Hit
AACTATGCCGATTAGGGATCGGACGGTGCTGTAGGCACCATCAATAGATC1166970.14938788564443573No Hit
CGTCCAACTTCTGGTTTTAAGGTCCTCTGTAGGCACCATCAATAGATCGG1164070.1490166465651373No Hit
TCGATGGGCCCCGCGTTCGATTCGCGGCTGGCGCACCTGTAGGCACCATC1159500.14843162498155324No Hit
CTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAATAGAT1154540.14779667814247738No Hit
CGCTCGAGACCCGGGTTCAATTCCCGGCGGGAGAGCCTGTAGGCACCATC1103390.14124878886450717No Hit
TTGGGTCGGGCCTTTTTTCCTGGAGAACCGCTGTAGGCACCATCAATAGA1072920.13734821826236146No Hit
CTGGAGATAGGGTTTAATGGCCGGCTGTAGGCACCATCAATAGATCGGAA1066680.1365494141744918No Hit
ATTAAATCAGTTATAGTTTATTTGATACTGTAGGCACCATCAATAGATCG1065460.13639323773423523No Hit
AACTATGCCGATTAGGGATCGGACGGTGTCTGTAGGCACCATCAATAGAT1047420.1340838746340479No Hit
TCGGGTATGGTGTAGCGGTAACATCGTTGACTGTAGGCACCATCAATAGA1038510.13294327456627242No Hit
CAGTATCCTTTCATTCTTATGTGGGGGACTGTAGGCACCATCAATAGATC1015110.1299477592367611No Hit
GTTTAGTGGTAAAATCCATCGCTGTAGGCACCATCAATAGATCGGAAGAG998010.1277587288036567No Hit
AGTATCCTTTCATTCTTATGTGGGGGCTGTAGGCACCATCAATAGATCGG988920.12659508631026964No Hit
TCGAGAGGACCCAGGTTCGATTCCTGGCAATCCCCTGTAGGCACCATCAA985910.126209765748653No Hit
AGTGAATCATCGAATCTTTGAACGCACCTGTAGGCACCATCAATAGATCG980640.12553513473213487No Hit
CGATGGGCCCCGCGTTCGATTCGCGGCTGGCGCACCTGTAGGCACCATCA928110.11881058685780889No Hit
CCGTCCAACTTCTGGTTTTAAGGTCCTCTGTAGGCACCATCAATAGATCG882870.11301925722075372No Hit
TGTTTTTTTACTTATTCAATTAAGCGGGGCTGGCTGTAGGCACCATCAAT880880.11276451040426963No Hit
GCTCAGTTGGTAGAGCTTTCGCTTCTGTAGGCACCATCAATAGATCGGAA857850.10981636006073779No Hit
GTCTAGTGGTATGATTCTCGCCTGTAGGCACCATCAATAGATCGGAAGAG844620.10812274177828332No Hit
GTGTAGTTGGTTATCACGTCAGCTGTAGGCACCATCAATAGATCGGAAGA844050.10804977409717983No Hit
TACAGTATAAAAATTATATATGTATTCTGTAGGCACCATCAATAGATCGG842080.10779758755020817No Hit
GTTTTTTTACTTATTCAATTAAGCGGGGCCTGTAGGCACCATCAATAGAT807700.10339648425838772No Hit
GTCTAGTGGTATGATTCTCGCTCTGTAGGCACCATCAATAGATCGGAAGA803720.10288699062541956No Hit
AGGGGTGTATTTATTAGATTAAAAACCCTGTAGGCACCATCAATAGATCG797920.10214451246682275No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)