FastQCFastQC Report
Sat 16 Sept 2023
SRR15359391_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR15359391_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences75383091
Total Bases3.6 Gbp
Sequences flagged as poor quality0
Sequence length35-76
%GC47

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT64862978.60444552479282No Hit
TTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT50443796.691658478159248No Hit
ATTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT50059936.640737244377521No Hit
TGTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAAT38263355.075853151206018No Hit
TTGTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAAT15353212.0366914909339546No Hit
TATTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT8934011.185147740890593No Hit
TCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT7382960.9793920496043336No Hit
AGTGAATCATCGAATCTTTGAACGCACCTGTAGGCACCATCAAT5910610.784076365348298No Hit
ATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAAT5083770.6743912902165288No Hit
AAATGGCTCAGTGAGGCTTCCGGACTGGCCCTGTAGGCACCATCAAT4605770.6109818447216498No Hit
TGTAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAAT3956180.5248100001630339No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN3228140.4282313125101225No Hit
AGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT3181510.42204557518077895No Hit
TGTAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAAT3058250.40569442821069784No Hit
GTTTAGTGGTAAAATCCATCGTCTGTAGGCACCATCAAT2878260.3818177208997705No Hit
AACTGGTGATTCATAATAACTTCTCGAATCGCATCTGTAGGCACCATCAA2802610.37178231388787175No Hit
AAATGGCTCAGTGAGGCTTCCGGACTGGCCCCTGTAGGCACCATCAAT2670090.354202774731007No Hit
GTCTAGTGGTATGATTCTCGCTTCTGTAGGCACCATCAAT2445820.324452071088462No Hit
AAAATCAGTTATAGTTTATTTGATAGTACCTGTAGGCACCATCAAT2350930.31186436756752256No Hit
GGCGCCGGTGAAATACCACTACTCCTATCTGTAGGCACCATCAAT1950800.25878482483558546No Hit
GCCAAGGATGTTTTCATTAATCAGGAACGACTGTAGGCACCATCAAT1907690.2530660357241122No Hit
ACGGGGAGGTAGTGACAATAAATACTGACTGTAGGCACCATCAAT1888880.2505707811848681No Hit
TATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAAT1699190.22540731315992338No Hit
TGCAAGGATGCTGGCGTAATGGTCATCCTGTAGGCACCATCAAT1610370.21362483000332264No Hit
AAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAAT1598540.21205551255519622No Hit
GCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT1558400.20673071100255094No Hit
TAGTGAATCATCGAATCTTTGAACGCACCTGTAGGCACCATCAAT1484090.19687306268722782No Hit
CGATGGGCCCCGCGTTCGATTCGCGGCTGGCGCCTGTAGGCACCATCAAT1316560.17464924594296619No Hit
TGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT1316310.17461608200703788No Hit
GCATAAGCATGGCAGGAAAGCTAAGTTAGTCACTGTAGGCACCATCAAT1307350.1734274865433682No Hit
GTAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAAT1209990.16051212333545728No Hit
TGTTTTTTTACTTATTCAATTAAGCGGGGCCTGTAGGCACCATCAAT1195370.15857269636237126No Hit
TTTTGACCCGTTCGGCACCTTACGATAAATCCTGTAGGCACCATCAAT1181810.1567738844776211No Hit
CGCTCGAGACCCGGGTTCAATTCCCGGCGGGAGACTGTAGGCACCATCAA1176500.15606948247850438No Hit
GTGTAGCGGTAACATCGTTGACTGTAGGCACCATCAAT1176060.15601111395127057No Hit
TTGGGTCGGGCCTTTTTTCCTGGAGAACCGCTGTAGGCACCATCAAT1131470.15009599433910187No Hit
CTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT1122810.1489471955985461No Hit
ATTAAATCAGTTATAGTTTATTTGATAGTACCTGTAGGCACCATCAAT1120190.14859963755001768No Hit
TTCATCCATTCTCAAACTTTAAATATGTCTGTAGGCACCATCAAT1025180.13599601533983266No Hit
GTGTAGTTGGTTATCACGTCAGTCTGTAGGCACCATCAAT1011100.13412822246835168No Hit
GTAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAAT991700.13155470104031686No Hit
AAGTTCCGTTTCAAAGGGGCACCTGTAGGCACCATCAAT970250.1287092353376701No Hit
GTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAAT965070.12802207858523604No Hit
TTTCTGGAGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT962360.12766258151977344No Hit
GGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT905010.12005477461782511No Hit
ATAGGGAAGTTCCGTTTCAAAGGGGCACCTGTAGGCACCATCAAT892090.11834086240905138No Hit
TTTCTGGCGAGCATGCCTGTTCGAGAGTCATTCTGTAGGCACCATCAAT891890.11831433126030876No Hit
AGTATCCTTTCATTCTTATGTGGGGGACTGTAGGCACCATCAAT889510.1179986105902715No Hit
TGGCCGGAAAGCTATCCAAACTCGGTCATTCTGTAGGCACCATCAAT861790.11432139337454338No Hit
CATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT851150.1129099362614356No Hit
ACTGGTGATTCATAATAACTTCTCGAATCGCATCTGTAGGCACCATCAAT849960.11275207592641696No Hit
ACCAGCGGAGGGATCATTACTGTAGGCACCATCAAT838940.11129020963069822No Hit
AAAAAACCCCGACTTCGGAAGGGGTGTATTTATTAGATTCTGTAGGCACC817810.10848719376603966No Hit
GTTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT814820.10809055309233737No Hit
TCAACAGCCCCGGGTTCGACTCCCGGTATCCGACTGTAGGCACCATCAAT812220.10774564815868323No Hit
CATTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT799410.10604632808171796No Hit
GAATGGCTCAGTGAGGCTTCCGGACTGGCCCTGTAGGCACCATCAAT765810.10158909509295659No Hit
TTGGAATGAGTACAATTTAAATCCCTTAACCTGTAGGCACCATCAAT761900.10107041113503823No Hit
CTTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT755620.10023733306451973No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)