FastQCFastQC Report
Sat 16 Sept 2023
SRR15359392_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR15359392_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences86388571
Total Bases4.1 Gbp
Sequences flagged as poor quality0
Sequence length35-76
%GC46

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT70537928.165191203359527No Hit
ATTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT53155916.153118333210998No Hit
TTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT50207185.811784987159934No Hit
TGTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAAT46548055.38821854108456No Hit
TTGTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAAT18079322.0927907234395624No Hit
TATTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT10557771.2221257832821428No Hit
ATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAAT8391650.9713842818397819No Hit
TCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT7978590.9235700866032382No Hit
AGTGAATCATCGAATCTTTGAACGCACCTGTAGGCACCATCAAT6744720.7807421655348368No Hit
AACTGGTGATTCATAATAACTTCTCGAATCGCATCTGTAGGCACCATCAA6239060.7222089597939987No Hit
AAATGGCTCAGTGAGGCTTCCGGACTGGCCCTGTAGGCACCATCAAT5041450.5835783532060045No Hit
TGTAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAAT3845080.44509128412368343No Hit
TGTAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAAT3510530.40636509660519793No Hit
CTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT3117290.36084518633836415No Hit
AAATGGCTCAGTGAGGCTTCCGGACTGGCCCCTGTAGGCACCATCAAT2763090.31984439237917245No Hit
AGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT2702540.3128353633723146No Hit
TATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAAT2584050.29911942865683006No Hit
AAAATCAGTTATAGTTTATTTGATAGTACCTGTAGGCACCATCAAT2541180.29415696666634294No Hit
GTCTAGTGGTATGATTCTCGCTTCTGTAGGCACCATCAAT2396460.2774047506816613No Hit
GTTTAGTGGTAAAATCCATCGTCTGTAGGCACCATCAAT2116310.24497569244431652No Hit
GGCGCCGGTGAAATACCACTACTCCTATCTGTAGGCACCATCAAT2114820.24480321592540288No Hit
AAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAAT2083510.24117889390715816No Hit
GCCAAGGATGTTTTCATTAATCAGGAACGACTGTAGGCACCATCAAT2044820.23670029221805278No Hit
TGTTTTTTTACTTATTCAATTAAGCGGGGCCTGTAGGCACCATCAAT1905570.2205812618430741No Hit
ACTGGTGATTCATAATAACTTCTCGAATCGCATCTGTAGGCACCATCAAT1695090.19621692781560193No Hit
GTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAAT1603430.1856067280010917No Hit
ACGGGGAGGTAGTGACAATAAATACTGACTGTAGGCACCATCAAT1568030.1815089637262318No Hit
GCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT1533680.17753274330698213No Hit
TAGTGAATCATCGAATCTTTGAACGCACCTGTAGGCACCATCAAT1515180.17539125632718244No Hit
AAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAAT1489660.1724371618555885No Hit
GCATAAGCATGGCAGGAAAGCTAAGTTAGTCACTGTAGGCACCATCAAT1435490.16616665646662915No Hit
TGGCCGGAAAGCTATCCAAACTCGGTCATTCTGTAGGCACCATCAAT1394730.1614484397478921No Hit
GTGTAGTTGGTTATCACGTCAGTCTGTAGGCACCATCAAT1337780.15485613253169797No Hit
ATTAAATCAGTTATAGTTTATTTGATAGTACCTGTAGGCACCATCAAT1263810.14629365729408814No Hit
TTTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAAT1182110.1368363877670809No Hit
GTAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAAT1154540.13364499338691457No Hit
TGCAAGGATGCTGGCGTAATGGTCATCCTGTAGGCACCATCAAT1134980.13138080499097501No Hit
CGATGGGCCCCGCGTTCGATTCGCGGCTGGCGCCTGTAGGCACCATCAAT1126860.1304408658409224No Hit
GTAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAAT1122820.12997321138695533No Hit
ATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAAT1116060.12919070046893125No Hit
TTTCTGGAGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT1086480.125766636422311No Hit
TTTTGACCCGTTCGGCACCTTACGATAAATCCTGTAGGCACCATCAAT1080340.12505589425712343No Hit
TGCTCGAGACCCGGGTTCAATTCCCGGCGGGAGACTGTAGGCACCATCAA1075460.12449100471866817No Hit
TTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAAT1074330.12436020037882095No Hit
TAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAAT1064780.12325473007303246No Hit
TGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT1060540.12276392440847296No Hit
AACCCCGACTTCGGAAGGGGTGTATTTATTAGATTCTGTAGGCACCATCA1005870.11643554099303251No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN1004540.11628158544259287No Hit
GTTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT970570.11234935232346882No Hit
CATTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT964260.11161893162927768No Hit
AGTATCCTTTCATTCTTATGTGGGGGACTGTAGGCACCATCAAT957770.11086767484555335No Hit
GGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT957250.11080748169801304No Hit
TAGCCTTCATCCATTCTCAAACTTTAAATATGTCTGTAGGCACCATCAAT956970.11077507000318364No Hit
GAATGGCTCAGTGAGGCTTCCGGACTGGCCCTGTAGGCACCATCAAT946940.10961403679197333No Hit
TGAATGGCTCAGTGAGGCTTCCGGACTGGCCCTGTAGGCACCATCAAT941200.10894959704797061No Hit
AGGTGAGAGCTTCGGCGCATCATCGACCGATCCTGCTGTAGGCACCATCA929630.1076102995151986No Hit
TGATCCTTTAGTCCCTCGAAATTTGAGGCTAGAGGTCTGTAGGCACCATC916850.10613093715834239No Hit
TTTCTGGCGAGCATGCCTGTTCGAGAGTCATTCTGTAGGCACCATCAAT880140.10188153245410206No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)