FastQCFastQC Report
Sat 16 Sept 2023
SRR15359393_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR15359393_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences80383632
Total Bases3.8 Gbp
Sequences flagged as poor quality0
Sequence length35-76
%GC47

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT874141710.874623082470322No Hit
TTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT63009297.838572161058859No Hit
ATTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT62206937.738755820339145No Hit
TGTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAAT43144845.367366331493954No Hit
TATTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT13432761.6710814957950644No Hit
TTGTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAAT13077291.6268598064839868No Hit
AACTGGTGATTCATAATAACTTCTCGAATCGCATCTGTAGGCACCATCAA10297821.2810841888806417No Hit
TCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT8044691.0007870756573924No Hit
ATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAAT6950690.8646897169314269No Hit
TGTAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAAT5407960.6727688044750205No Hit
TGTAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAAT4018840.49995750378634296No Hit
AGTGAATCATCGAATCTTTGAACGCACCTGTAGGCACCATCAAT3780790.4703432659026902No Hit
TGTTTTTTTACTTATTCAATTAAGCGGGGCCTGTAGGCACCATCAAT3056290.3802129766915732No Hit
AAATGGCTCAGTGAGGCTTCCGGACTGGCCCTGTAGGCACCATCAAT3035990.37768758694556126No Hit
CGCTCGAGACCCGGGTTCAATTCCCGGCGGGAGACTGTAGGCACCATCAA3014990.3750751147945144No Hit
AAATGGCTCAGTGAGGCTTCCGGACTGGCCCCTGTAGGCACCATCAAT2605590.32414434819267685No Hit
TATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAAT2378590.2959047682742178No Hit
GCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT2331740.29007646730866804No Hit
AAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAAT2093740.2604684495968035No Hit
CTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT2044220.25430799145776345No Hit
TGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT1987640.24726924506222858No Hit
AGTATCCTTTCATTCTTATGTGGGGGACTGTAGGCACCATCAAT1924420.23940445985321987No Hit
TGCTCGAGACCCGGGTTCAATTCCCGGCGGGAGACTGTAGGCACCATCAA1846610.22972462851641237No Hit
GCCAAGGATGTTTTCATTAATCAGGAACGACTGTAGGCACCATCAAT1839810.22887868515321627No Hit
TCAACAGCCCCGGGTTCGACTCCCGGTATCCGACTGTAGGCACCATCAAT1718730.2138159171508946No Hit
AGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT1637200.20367330503304454No Hit
GTTTAGTGGTAAAATCCATCGTCTGTAGGCACCATCAAT1532890.19069678264848744No Hit
TTGGGTCGGGCCTTTTTTCCTGGAGAACCGCTGTAGGCACCATCAAT1511400.18802335281391616No Hit
GGCGCCGGTGAAATACCACTACTCCTATCTGTAGGCACCATCAAT1470310.18291161563836777No Hit
TGATCCTTTAGTCCCTCGAAATTTGAGGCTAGAGGTCTGTAGGCACCATC1431000.17802131657847955No Hit
GGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT1399570.17411131659241275No Hit
CATTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT1330020.16545905763501703No Hit
GTCTAGTGGTATGATTCTCGCTTCTGTAGGCACCATCAAT1298000.16147565962184937No Hit
ACTGGTGATTCATAATAACTTCTCGAATCGCATCTGTAGGCACCATCAAT1280480.15929611142726172No Hit
GTTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT1230960.15313565328822165No Hit
GTAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAAT1222690.15210683687445226No Hit
AAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAAT1200250.14931522377590503No Hit
AACCCCGACTTCGGAAGGGGTGTATTTATTAGATTCTGTAGGCACCATCA1122930.139696350122622No Hit
CTTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT1119860.1393144315748261No Hit
GTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAAT1101070.13697689101681795No Hit
GTGTAGTTGGTTATCACGTCAGTCTGTAGGCACCATCAAT1067940.1328554051899521No Hit
TTGTTTTTTTACTTATTCAATTAAGCGGGGCCTGTAGGCACCATCAAT1057340.13153672877085226No Hit
TCAACAGCCCCGGGTTCGACTCCCGGTATCCGCTGTAGGCACCATCAAT1024370.12743514749370868No Hit
GCATAAGCATGGCAGGAAAGCTAAGTTAGTCACTGTAGGCACCATCAAT995880.12389089360878842No Hit
TGAATGGCTCAGTGAGGCTTCCGGACTGGCCCTGTAGGCACCATCAAT993340.12357490888194751No Hit
GTAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAAT989070.12304370621123466No Hit
GAATGGCTCAGTGAGGCTTCCGGACTGGCCCTGTAGGCACCATCAAT957510.11911753377851848No Hit
ATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAAT913650.11366119908590347No Hit
TAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAAT905360.11262989460341875No Hit
TTTCTGGAGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT888150.11048891147391797No Hit
TGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAAT870180.10825338173323644No Hit
AAAATCAGTTATAGTTTATTTGATAGTACCTGTAGGCACCATCAAT853310.10615469577189546No Hit
TTTCTGGCGAGCATGCCTGTTCGAGCGTCATTTCTGTAGGCACCATCAAT850110.10575660477745022No Hit
TAGTGAATCATCGAATCTTTGAACGCACCTGTAGGCACCATCAAT814110.1012780810899413No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)