FastQCFastQC Report
Sat 16 Sept 2023
SRR15359395_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR15359395_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences49958245
Total Bases2.4 Gbp
Sequences flagged as poor quality0
Sequence length35-76
%GC46

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT41293328.265566574646488No Hit
TTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT40047508.016194323879871No Hit
ATTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT37134607.433127404695661No Hit
TGTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAAT35593807.1247098451917195No Hit
TTGTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAAT12158232.4336783648024465No Hit
TCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT6116611.224344450050237No Hit
TATTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT5749121.1507850205706784No Hit
TGTAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAAT4733100.9474111830789892No Hit
TGTAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAAT4447860.8903155024761179No Hit
ATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAAT4353730.8714737677434424No Hit
TGTTTTTTTACTTATTCAATTAAGCGGGGCCTGTAGGCACCATCAAT3011870.6028774629693257No Hit
TTGGGTCGGGCCTTTTTTCCTGGAGAACCGCTGTAGGCACCATCAAT2871900.5748600656408166No Hit
AAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAAT2625000.5254387939368167No Hit
CGATGGGCCCCGCGTTCGATTCGCGGCTGGCGCCTGTAGGCACCATCAAT2433030.48701270430936877No Hit
GCCAAGGATGTTTTCATTAATCAGGAACGACTGTAGGCACCATCAAT1860500.37241100042645614No Hit
CTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT1717850.34385715511023257No Hit
TATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAAT1555140.3112879565725337No Hit
CGCTCGAGACCCGGGTTCAATTCCCGGCGGGAGACTGTAGGCACCATCAA1533820.3070203927299688No Hit
AGTGAATCATCGAATCTTTGAACGCACCTGTAGGCACCATCAAT1524200.3050947846546651No Hit
TGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT1505530.3013576637850269No Hit
AAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAAT1484310.29711011665842146No Hit
AGTATCCTTTCATTCTTATGTGGGGGACTGTAGGCACCATCAAT1475530.29535264899717756No Hit
TCAACAGCCCCGGGTTCGACTCCCGGTATCCGACTGTAGGCACCATCAAT1342790.2687824602325402No Hit
GTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAAT1305030.2612241482862338No Hit
AACTGGTGATTCATAATAACTTCTCGAATCGCATCTGTAGGCACCATCAA1268980.25400812218283486No Hit
GCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT1247430.2496945198935631No Hit
TTGTTTTTTTACTTATTCAATTAAGCGGGGCCTGTAGGCACCATCAAT1086420.21746560552717573No Hit
AAATGGCTCAGTGAGGCTTCCGGACTGGCCCCTGTAGGCACCATCAAT1074530.21508561799959144No Hit
TGGGTCGGGCCTTTTTTCCTGGAGAACCGCTGTAGGCACCATCAAT987190.1976030182805661No Hit
TAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAAT975000.19516298060510334No Hit
GGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT962200.1926008409622876No Hit
AAATGGCTCAGTGAGGCTTCCGGACTGGCCCTGTAGGCACCATCAAT928390.18583318929638143No Hit
TGCTCGAGACCCGGGTTCAATTCCCGGCGGGAGACTGTAGGCACCATCAA921380.1844300175076206No Hit
GTAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAAT875730.17529238667210986No Hit
GTAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAAT867090.17356294241320927No Hit
TAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAAT847710.1696837028602586No Hit
TTTCTGGAGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT786840.1574995278557123No Hit
TCAACAGCCCCGGGTTCGACTCCCGGTATCCGCTGTAGGCACCATCAAT747480.14962094845405396No Hit
TTTCTGGCGAGCATGCCTGTTCGAGAGTCATTCTGTAGGCACCATCAAT742820.1486881694903414No Hit
TTCTGGCGAGCATGCCTGTTCGAGAGTCATTCTGTAGGCACCATCAAT733950.14691268678473393No Hit
TGATCCTTTAGTCCCTCGAAATTTGAGGCTAGAGGTCTGTAGGCACCATC727790.1456796570816289No Hit
GGCGCCGGTGAAATACCACTACTCCTATCTGTAGGCACCATCAAT713040.14272719147760293No Hit
TTCTGGAGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT696850.13948648516376028No Hit
AAAATCAGTTATAGTTTATTTGATAGTACCTGTAGGCACCATCAAT696160.1393483698236397No Hit
AGGGGTGTATTTATTAGATTAAAAACCACTGTAGGCACCATCAAT696040.13932434976448832No Hit
TTGGGTCGGGCCTTTTTTCCTGGAGAACCGCCTGTAGGCACCATCAAT680420.13619773873161478No Hit
ATTCTGGAGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT679580.13602959831755498No Hit
GTTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT664590.13302909259522627No Hit
CGATGGGCCCCGCGTTCGATTCGCGGCTGGCGCTGTAGGCACCATCAAT649240.1299565266954434No Hit
ATTCTGGCGAGCATGCCTGTTCGAGAGTCATTCTGTAGGCACCATCAAT644920.12909180456599306No Hit
TGCTTTGATACTTATGGTACCAACATTTACTGTAGGCACCATCAAT631950.1264956365060462No Hit
GGGTCGGGCCTTTTTTCCTGGAGAACCGCTGTAGGCACCATCAAT629340.1259732002195033No Hit
TGTTTTTTTACTTATTCAATTAAGCGGGGCTGGCTGTAGGCACCATCAAT603350.12077085574162982No Hit
TCTTCCGTAGTATAGTGGTCAGTATGTGAGCCTGTAGGCACCATCAAT568610.11381704861730031No Hit
ATTCTGGCGAGCATGCCTGTTCGAGCGTCATTTCTGTAGGCACCATCAAT563440.11278218440219429No Hit
TTGTAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAAT529820.10605256449661112No Hit
ATTAAATCAGTTATAGTTTATTTGATAGTACCTGTAGGCACCATCAAT510130.10211127312418601No Hit
TTATATATCAAATCATCTTTATGCTATTCTGTAGGCACCATCAAT508750.10183504244394494No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)