FastQCFastQC Report
Sat 16 Sept 2023
SRR15359396_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR15359396_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences77111715
Total Bases3.7 Gbp
Sequences flagged as poor quality0
Sequence length35-76
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT55212687.160089747712134No Hit
ATTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT44805645.810484178700992No Hit
TGTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAAT43972395.70242666759519No Hit
TTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT41181035.340437571645242No Hit
TTGTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAAT14321071.8571847351598911No Hit
ATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAAT12423251.6110716769818956No Hit
TATTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT8776221.1381175999003523No Hit
TCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT6903190.8952193580443645No Hit
CGATGGGCCCCGCGTTCGATTCGCGGCTGGCGCCTGTAGGCACCATCAAT6084960.7891096703010689No Hit
TGTAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAAT5048560.654707264648439No Hit
AGTATCCTTTCATTCTTATGTGGGGGACTGTAGGCACCATCAAT4392860.5696747893624204No Hit
TGTAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAAT4366410.5662447009510811No Hit
AGTGAATCATCGAATCTTTGAACGCACCTGTAGGCACCATCAAT3671530.47613128562890866No Hit
TATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAAT3656520.4741847590862167No Hit
CGCTCGAGACCCGGGTTCAATTCCCGGCGGGAGACTGTAGGCACCATCAA3384070.43885290321969883No Hit
TGTTTTTTTACTTATTCAATTAAGCGGGGCCTGTAGGCACCATCAAT3044040.3947571390417137No Hit
AACTGGTGATTCATAATAACTTCTCGAATCGCATCTGTAGGCACCATCAA2492080.32317787251911073No Hit
GCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT2481190.3217656357403022No Hit
AAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAAT2467700.32001622580952843No Hit
GCCAAGGATGTTTTCATTAATCAGGAACGACTGTAGGCACCATCAAT2349990.30475135976420703No Hit
TGCTTTGATACTTATGGTACCAACATTTACTGTAGGCACCATCAAT2315140.30023194270805675No Hit
TCAACAGCCCCGGGTTCGACTCCCGGTATCCGACTGTAGGCACCATCAAT2078640.26956215407736683No Hit
CTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT2034900.2638898642054583No Hit
GGCGCCGGTGAAATACCACTACTCCTATCTGTAGGCACCATCAAT1859030.24108269411463615No Hit
AAATGGCTCAGTGAGGCTTCCGGACTGGCCCTGTAGGCACCATCAAT1821400.23620276114984604No Hit
ATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAAT1761550.22844129455556783No Hit
TTGGGTCGGGCCTTTTTTCCTGGAGAACCGCTGTAGGCACCATCAAT1687340.218817594706589No Hit
AAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAAT1668100.21632251338204578No Hit
AAATGGCTCAGTGAGGCTTCCGGACTGGCCCCTGTAGGCACCATCAAT1665480.21598274659045No Hit
TGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAAT1648160.21373665467043496No Hit
TGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT1646800.2135602871755608No Hit
TCGATGGGCCCCGCGTTCGATTCGCGGCTGGCGCCTGTAGGCACCATCAA1618910.20994345671082534No Hit
GTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAAT1434730.1860586293535295No Hit
CGATGGGCCCCGCGTTCGATTCGCGGCTGGCGCTGTAGGCACCATCAAT1358700.17619890829817494No Hit
GTAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAAT1251150.16225161118514872No Hit
TAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAAT1198640.1554420103352649No Hit
GGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT1159350.15034680528114308No Hit
TCAACAGCCCCGGGTTCGACTCCCGGTATCCGCTGTAGGCACCATCAAT1140230.14786728579438288No Hit
GTAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAAT1136690.14740821157978395No Hit
TTGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAAT1110990.14407538465458847No Hit
TGCTCGAGACCCGGGTTCAATTCCCGGCGGGAGACTGTAGGCACCATCAA1108450.14374599242151467No Hit
TTGTTTTTTTACTTATTCAATTAAGCGGGGCCTGTAGGCACCATCAAT1083920.1405648934147036No Hit
TAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAAT1027890.13329881198985136No Hit
TGATCCTTTAGTCCCTCGAAATTTGAGGCTAGAGGTCTGTAGGCACCATC959550.12443634537242493No Hit
TGCTTTGATACTTATGGTACCAACATTTCTGTAGGCACCATCAAT947700.1228996138913523No Hit
GTTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT944900.12253650434308198No Hit
TGTAATGGATATAAAGCTTATGTTTATCTGTAGGCACCATCAAT925150.11997528520796094No Hit
AAAATCAGTTATAGTTTATTTGATAGTACCTGTAGGCACCATCAAT904490.11729605546965205No Hit
AGGGGTGTATTTATTAGATTAAAAACCACTGTAGGCACCATCAAT811800.10527583260208906No Hit
TCGCGTATTGTAATTTTAACACGCGCTGGACTGTAGGCACCATCAAT777080.10077327420353703No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)