FastQCFastQC Report
Sat 16 Sept 2023
SRR15359398_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR15359398_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences81080017
Total Bases3.9 Gbp
Sequences flagged as poor quality0
Sequence length35-76
%GC45

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT43046645.309155275584118No Hit
ATTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT38288814.722348541194806No Hit
TTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT36987144.561807134302895No Hit
TGTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAAT28418573.505002965157247No Hit
TGTAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAAT11612841.4322690632884303No Hit
AGTGAATCATCGAATCTTTGAACGCACCTGTAGGCACCATCAAT10737341.3242893128648456No Hit
TCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT9839701.2135789266053065No Hit
TTGTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAAT8752751.0795200005939811No Hit
TGTAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAAT8394841.0353771879450888No Hit
ATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAAT7594340.936647558917014No Hit
TATTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT6875250.8479586283263852No Hit
AGTATCCTTTCATTCTTATGTGGGGGACTGTAGGCACCATCAAT4938000.6090279926803667No Hit
AACTGGTGATTCATAATAACTTCTCGAATCGCATCTGTAGGCACCATCAA4624720.5703896189365624No Hit
GCCAAGGATGTTTTCATTAATCAGGAACGACTGTAGGCACCATCAAT4103480.5061025085872886No Hit
AAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAAT3563560.43951150133577305No Hit
CGCTCGAGACCCGGGTTCAATTCCCGGCGGGAGACTGTAGGCACCATCAA3207260.3955672579595043No Hit
TGTTTTTTTACTTATTCAATTAAGCGGGGCCTGTAGGCACCATCAAT2761390.3405759029379582No Hit
CTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT2542790.31361488244384556No Hit
AAAATCAGTTATAGTTTATTTGATAGTACCTGTAGGCACCATCAAT2539830.3132498109861028No Hit
TATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAAT2492930.3074654017401106No Hit
TAGTGAATCATCGAATCTTTGAACGCACCTGTAGGCACCATCAAT2132530.26301548506088746No Hit
TCAACAGCCCCGGGTTCGACTCCCGGTATCCGACTGTAGGCACCATCAAT2126080.2622199746208736No Hit
TTGGGTCGGGCCTTTTTTCCTGGAGAACCGCTGTAGGCACCATCAAT2037750.2513257983160018No Hit
GTAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAAT2018660.24897133408346472No Hit
ATTAAATCAGTTATAGTTTATTTGATAGTACCTGTAGGCACCATCAAT1685360.20786379460181909No Hit
AAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAAT1664220.20525649371780472No Hit
GCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT1602560.19765166058117625No Hit
TAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAAT1601440.1975135254350033No Hit
GTAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAAT1571500.19382087697391578No Hit
ATAGGGAAGTTCCGTTTCAAAGGGGCACTCTGTAGGCACCATCAAT1538290.18972492321998402No Hit
AATTCTCACGCCAGGTCGTACTCATAACCGCCTGTAGGCACCATCAAT1514240.18675871762582388No Hit
ACGGGGAGGTAGTGACAATAAATACTGACTGTAGGCACCATCAAT1491350.18393558057591428No Hit
TTTTGACCCGTTCGGCACCTTACGATAAATCCTGTAGGCACCATCAAT1431300.1765293167119094No Hit
GCATAAGCATGGCAGGAAAGCTAAGTTAGTCACTGTAGGCACCATCAAT1382140.17046617047453258No Hit
TGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT1350350.16654535235235582No Hit
TACCTGGTTGATTCTGCCAGTAGTCATCTGTAGGCACCATCAAT1330020.16403795277941297No Hit
TGATCCTTTAGTCCCTCGAAATTTGAGGCTAGAGGTCTGTAGGCACCATC1322520.16311294063986198No Hit
TTCATCCATTCTCAAACTTTAAATATGTCTGTAGGCACCATCAAT1291260.15925749004221348No Hit
ATTAAATCAGTTATAGTTTATTTGATACTGTAGGCACCATCAAT1270250.15666622270195132No Hit
TGCAAGGATGCTGGCGTAATGGTCATCCTGTAGGCACCATCAAT1224910.15107421598098578No Hit
GCCAAGGATGTTTTCATTAATCAGGAACGAACTGTAGGCACCATCAAT1220540.15053524224100742No Hit
AGTTGAACCTTGGGCTCGGCCCGTCTGTAGGCACCATCAAT1202480.14830781300896864No Hit
TGCTTTGATACTTATGGTACCAACATTTACTGTAGGCACCATCAAT1196440.14756286989925027No Hit
AGGGGTGTATTTATTAGATTAAAAACCACTGTAGGCACCATCAAT1194610.14733716693719984No Hit
TTGTAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAAT1188480.1465811236818068No Hit
AAAATCAGTTATAGTTTATTTGATAGTACCCTGTAGGCACCATCAAT1171790.14452266333392605No Hit
ATAGGGAAGTTCCGTTTCAAAGGGGCACCTGTAGGCACCATCAAT1158070.14283050779330744No Hit
CGATGGGCCCCGCGTTCGATTCGCGGCTGGCGCCTGTAGGCACCATCAAT1146310.1413800887584915No Hit
TGTAATGGATATAAAGCTTATGTTTATCTGTAGGCACCATCAAT1106000.13640845684578484No Hit
GTGAATCATCGAATCTTTGAACGCACCTGTAGGCACCATCAAT1101530.13585714961061243No Hit
AAATGGCTCAGTGAGGCTTCCGGACTGGCCCCTGTAGGCACCATCAAT1060020.1307375157555776No Hit
TAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAAT1045880.12899355953514416No Hit
GGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT1026630.1266193617102966No Hit
GGCGCCGGTGAAATACCACTACTCCTATCTGTAGGCACCATCAAT1018150.12557348131784432No Hit
TTGGGTCGGGCCTTTTTTCCTGGAGAACCGCCTGTAGGCACCATCAAT1002520.12364575601902007No Hit
TCTACATGGATAACCGTGGTAATTCTAGAGCTCTGTAGGCACCATCAAT994140.12261220912176177No Hit
TGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAAT974300.12016524367526957No Hit
ATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAAT967050.11927106527370364No Hit
AGGGAAGTTCCGTTTCAAAGGGGCACTCTGTAGGCACCATCAAT944450.11648369535985667No Hit
AGCATAAGCATGGCAGGAAAGCTAAGTTAGTCACTGTAGGCACCATCAAT940730.11602488933863937No Hit
TGGTCTTGTAATTGGAATGAGTACAATTTCTGTAGGCACCATCAAT929070.11458680379901745No Hit
TCAACAGCCCCGGGTTCGACTCCCGGTATCCGCTGTAGGCACCATCAAT903760.11146519616541273No Hit
TGTACCAACACTAGTGGGCCATTTTTGGCTGTAGGCACCATCAAT891310.10992967601375812No Hit
TTGTTTTTTTACTTATTCAATTAAGCGGGGCCTGTAGGCACCATCAAT866490.10686850250660405No Hit
TTTTTGACCCGTTCGGCACCTTACGATAAATCCTGTAGGCACCATCAAT854430.10538108298620609No Hit
GTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAAT837980.10335222302679094No Hit
TCATCCATTCTCAAACTTTAAATATGTCTGTAGGCACCATCAAT834630.10293905093779149No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)