FastQCFastQC Report
Sat 16 Sept 2023
SRR15359399_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR15359399_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences83814601
Total Bases4 Gbp
Sequences flagged as poor quality0
Sequence length35-76
%GC48

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT79665799.505001401844053No Hit
ATTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT61852657.379698675651991No Hit
TTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT55574346.63062752037679No Hit
TGTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAAT37713984.499690930939348No Hit
TTGTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAAT13151291.5690929555340842No Hit
TATTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT11597941.3837612852204595No Hit
TCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT9463301.1290753504869635No Hit
AACTGGTGATTCATAATAACTTCTCGAATCGCATCTGTAGGCACCATCAA6639660.7921841684839614No Hit
AGTATCCTTTCATTCTTATGTGGGGGACTGTAGGCACCATCAAT5448720.6500919809902811No Hit
ATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAAT5346790.6379306154544601No Hit
TGTTTTTTTACTTATTCAATTAAGCGGGGCCTGTAGGCACCATCAAT5310330.6335805380735512No Hit
TCAACAGCCCCGGGTTCGACTCCCGGTATCCGACTGTAGGCACCATCAAT4322550.5157275639837503No Hit
TGTAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAAT4285080.5112569825393549No Hit
CGCTCGAGACCCGGGTTCAATTCCCGGCGGGAGACTGTAGGCACCATCAA4168820.4973858910334728No Hit
AGTGAATCATCGAATCTTTGAACGCACCTGTAGGCACCATCAAT3480150.41522001637876915No Hit
TGTAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAAT3266360.3897125275344328No Hit
AAATGGCTCAGTGAGGCTTCCGGACTGGCCCCTGTAGGCACCATCAAT2180890.2602040663535462No Hit
TCAACAGCCCCGGGTTCGACTCCCGGTATCCGCTGTAGGCACCATCAAT2057820.2455204672512848No Hit
TTGGGTCGGGCCTTTTTTCCTGGAGAACCGCTGTAGGCACCATCAAT2047460.2442844057683935No Hit
TTGTTTTTTTACTTATTCAATTAAGCGGGGCCTGTAGGCACCATCAAT1954030.23313718334112216No Hit
AAATGGCTCAGTGAGGCTTCCGGACTGGCCCTGTAGGCACCATCAAT1907110.22753911338192734No Hit
GCCAAGGATGTTTTCATTAATCAGGAACGACTGTAGGCACCATCAAT1844600.22008098565069828No Hit
CTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT1828400.2181481481967563No Hit
GCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT1712750.20434983637278187No Hit
TATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAAT1590680.18978554822446747No Hit
TTAACTGGTGATTCATAATAACTTCTCGAATCGCATCTGTAGGCACCATC1516910.18098397915179482No Hit
GTGTAGTTGGTTATCACGTCAGTCTGTAGGCACCATCAAT1497090.1786192360445646No Hit
TTGGGTCGGGCCTTTTTTCCTGGAGAACCGCATGCCCCTGTAGGCACCAT1398880.16690170725742642No Hit
AAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAAT1365070.16286780390447722No Hit
TGATCCTTTAGTCCCTCGAAATTTGAGGCTAGAGGTCTGTAGGCACCATC1252560.14944412847589647No Hit
TGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT1252180.1493987903133966No Hit
GTTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT1182730.1411126445617751No Hit
CGATGGGCCCCGCGTTCGATTCGCGGCTGGCGCCTGTAGGCACCATCAAT1176000.14030968184171158No Hit
GTCTAGTGGTATGATTCTCGCTTCTGTAGGCACCATCAAT1152760.13753689527198248No Hit
TTTCTGGAGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT1091220.13019449916608206No Hit
TGCTTTGATACTTATGGTACCAACATTTACTGTAGGCACCATCAAT1037380.12377079740557376No Hit
AATTCTCACGCCAGGTCGTACTCATAACCGCCTGTAGGCACCATCAAT1025450.12234741772498565No Hit
TTGGGTCGGGCCTTTTTTCCTGGAGAACCGCCTGTAGGCACCATCAAT1016100.12123186030558089No Hit
TTTCTGGCGAGCATGCCTGTTCGAGAGTCATTCTGTAGGCACCATCAAT1004320.11982637726808483No Hit
TTTTGACCCGTTCGGCACCTTACGATAAATCCTGTAGGCACCATCAAT994780.11868815076743014No Hit
AAAATCAGTTATAGTTTATTTGATAGTACCTGTAGGCACCATCAAT988520.11794126419572169No Hit
TACCTGGTTGATTCTGCCAGTAGTCATCTGTAGGCACCATCAAT987110.11777303575065637No Hit
TGCTCGAGACCCGGGTTCAATTCCCGGCGGGAGACTGTAGGCACCATCAA985300.11755708292401225No Hit
GTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAAT965160.115154160311519No Hit
TGTACCAACACTAGTGGGCCATTTTTGGCTGTAGGCACCATCAAT880760.10508431579838934No Hit
CATTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT878560.10482183169970588No Hit
GTAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAAT857690.1023318120908313No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)