FastQCFastQC Report
Sat 16 Sept 2023
SRR15359400_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR15359400_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences78326753
Total Bases3.8 Gbp
Sequences flagged as poor quality0
Sequence length35-76
%GC47

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT72050149.198662939596131No Hit
ATTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT61099847.800634860990599No Hit
TTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT51375716.559152273297989No Hit
TGTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAAT33741934.307842302616578No Hit
TTGTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAAT14245261.8186966080414442No Hit
TATTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT11410751.4568138679258158No Hit
ATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAAT8524241.0882922722457293No Hit
TCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT7308080.9330247610289679No Hit
AAATGGCTCAGTGAGGCTTCCGGACTGGCCCTGTAGGCACCATCAAT4883250.6234459891373257No Hit
TGTAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAAT4570170.5834749718273142No Hit
AGTGAATCATCGAATCTTTGAACGCACCTGTAGGCACCATCAAT4088350.5219608682106356No Hit
TGTAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAAT4019640.5131886419445985No Hit
AAATGGCTCAGTGAGGCTTCCGGACTGGCCCCTGTAGGCACCATCAAT3375210.43091407095606277No Hit
GTTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT2634850.33639208815409466No Hit
TATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAAT2440130.31153212747118475No Hit
GCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT2435490.31093973728235613No Hit
AAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAAT2209010.28202496789315395No Hit
GCCAAGGATGTTTTCATTAATCAGGAACGACTGTAGGCACCATCAAT2134040.2724535255533955No Hit
GGCGCCGGTGAAATACCACTACTCCTATCTGTAGGCACCATCAAT2129970.27193390743517737No Hit
AAAATCAGTTATAGTTTATTTGATAGTACCTGTAGGCACCATCAAT2072080.26454307380774483No Hit
TGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT1710180.2183391924851015No Hit
TGTTTTTTTACTTATTCAATTAAGCGGGGCCTGTAGGCACCATCAAT1573440.2008815557565625No Hit
GTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT1496730.19108796709599338No Hit
ATTAAATCAGTTATAGTTTATTTGATAGTACCTGTAGGCACCATCAAT1471740.1878974863160739No Hit
CGCTCGAGACCCGGGTTCAATTCCCGGCGGGAGACTGTAGGCACCATCAA1438960.18371245390447885No Hit
AGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT1311120.16739108283985676No Hit
GTAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAAT1297000.16558837821350772No Hit
GTAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAAT1245130.15896611978796057No Hit
CTTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT1237820.15803284989995692No Hit
TTGGGTCGGGCCTTTTTTCCTGGAGAACCGCTGTAGGCACCATCAAT1221620.15596459105102953No Hit
GGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT1196220.15272176544839028No Hit
TTTCTGGAGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT1164230.14863759257325526No Hit
ACGGGGAGGTAGTGACAATAAATACTGACTGTAGGCACCATCAAT1141680.14575862732366807No Hit
GTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAAT1140630.14562457350938574No Hit
TCAACAGCCCCGGGTTCGACTCCCGGTATCCGACTGTAGGCACCATCAAT1118880.14284774449925175No Hit
AAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAAT1117850.14271624409095574No Hit
AACCCCGACTTCGGAAGGGGTGTATTTATTAGATTCTGTAGGCACCATCA1094450.1397287590869495No Hit
AGTATCCTTTCATTCTTATGTGGGGGACTGTAGGCACCATCAAT1066330.13613867027016938No Hit
CGATGGGCCCCGCGTTCGATTCGCGGCTGGCGCCTGTAGGCACCATCAAT1050870.13416488744273622No Hit
CATTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT1041790.13300564112494231No Hit
TGCTCGAGACCCGGGTTCAATTCCCGGCGGGAGACTGTAGGCACCATCAA1039770.132747747120323No Hit
CTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT1034780.13211067232673362No Hit
GCATAAGCATGGCAGGAAAGCTAAGTTAGTCACTGTAGGCACCATCAAT1019240.13012667587535512No Hit
TTTCTGGCGAGCATGCCTGTTCGAGAGTCATTCTGTAGGCACCATCAAT979060.12499688324881793No Hit
ATTCTGGAGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT964900.12318907181049622No Hit
TCAACAGCCCCGGGTTCGACTCCCGGTATCCGCTGTAGGCACCATCAAT952630.12162255723788269No Hit
TCGACCACCCAGGGCCGGAAAGCTATCCAAACTCTGTAGGCACCATCAAT936350.11954408476501No Hit
ATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAAT935750.11946748258542007No Hit
GAATGGCTCAGTGAGGCTTCCGGACTGGCCCTGTAGGCACCATCAAT909960.1161748655660474No Hit
TAGTGAATCATCGAATCTTTGAACGCACCTGTAGGCACCATCAAT889180.11352187674625043No Hit
GTCTAGTGGTATGATTCTCGCTTCTGTAGGCACCATCAAT868050.11082420332169265No Hit
TAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAAT852670.10886063411820479No Hit
ATTCTGGCGAGCATGCCTGTTCGAGAGTCATTCTGTAGGCACCATCAAT835390.10665449134601558No Hit
TGAATGGCTCAGTGAGGCTTCCGGACTGGCCCTGTAGGCACCATCAAT823910.1051888363098621No Hit
TTCTGGAGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT822190.1049692433950377No Hit
TTTTGACCCGTTCGGCACCTTACGATAAATCCTGTAGGCACCATCAAT784260.10012670894196266No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)