FastQCFastQC Report
Sat 16 Sept 2023
SRR15359401_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR15359401_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences88908506
Total Bases4.3 Gbp
Sequences flagged as poor quality0
Sequence length35-76
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT63308377.120620157535883No Hit
ATTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT53269895.99154033698418No Hit
TTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT46845715.2689795507305No Hit
TGTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAAT36508744.106327014425369No Hit
TTGTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAAT11675081.3131566961658314No Hit
TATTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT11435041.2861581545414789No Hit
TGTAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAAT8497770.9557881897149413No Hit
TCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT7588870.8535595008198653No Hit
CGATGGGCCCCGCGTTCGATTCGCGGCTGGCGCCTGTAGGCACCATCAAT7320070.8233261730885457No Hit
ATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAAT7316390.8229122644350813No Hit
CGCTCGAGACCCGGGTTCAATTCCCGGCGGGAGACTGTAGGCACCATCAA6673800.7506368400791709No Hit
TGTAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAAT5950470.6692801698861074No Hit
CGATGGGCCCCGCGTTCGATTCGCGGCTGGCGCTGTAGGCACCATCAAT4236340.47648309375483155No Hit
TCAACAGCCCCGGGTTCGACTCCCGGTATCCGACTGTAGGCACCATCAAT4160710.4679765960750707No Hit
TTGGGTCGGGCCTTTTTTCCTGGAGAACCGCTGTAGGCACCATCAAT3724290.41889017907915355No Hit
AAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAAT3590210.4038095072703167No Hit
TGCTTTGATACTTATGGTACCAACATTTACTGTAGGCACCATCAAT3378770.3800277557245198No Hit
AGTATCCTTTCATTCTTATGTGGGGGACTGTAGGCACCATCAAT3336450.37526780620967803No Hit
TGTTTTTTTACTTATTCAATTAAGCGGGGCCTGTAGGCACCATCAAT2971710.33424360994211283No Hit
TATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAAT2682060.30166517475841964No Hit
GCCAAGGATGTTTTCATTAATCAGGAACGACTGTAGGCACCATCAAT2649750.2980311017710724No Hit
GTTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT2293760.25799106330726107No Hit
TGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT2174790.24460989143153525No Hit
AGTGAATCATCGAATCTTTGAACGCACCTGTAGGCACCATCAAT2150260.24185087532569718No Hit
TGCTTTGATACTTATGGTACCAACATTTCTGTAGGCACCATCAAT1988240.22362764705550223No Hit
TCGATGGGCCCCGCGTTCGATTCGCGGCTGGCGCCTGTAGGCACCATCAA1972000.221801050171735No Hit
TAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAAT1818360.2045203638895923No Hit
GGCGCCGGTGAAATACCACTACTCCTATCTGTAGGCACCATCAAT1802050.20268589374339502No Hit
GCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT1611890.18129761397632754No Hit
TGCTCGAGACCCGGGTTCAATTCCCGGCGGGAGACTGTAGGCACCATCAA1596440.17955987248284208No Hit
TGATCCTTTAGTCCCTCGAAATTTGAGGCTAGAGGTCTGTAGGCACCATC1500480.16876675444304506No Hit
GTAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAAT1496560.16832585174696332No Hit
AAATGGCTCAGTGAGGCTTCCGGACTGGCCCCTGTAGGCACCATCAAT1444960.16252213258425466No Hit
TCGAGAGGACCCAGGTTCGATTCCTGGCAATCCCCTGTAGGCACCATCAA1431270.1609823474032957No Hit
CGAGAGGACCCAGGTTCGATTCCTGGCAATCCCCTGTAGGCACCATCAAT1399040.1573572724301542No Hit
TCAACAGCCCCGGGTTCGACTCCCGGTATCCGCTGTAGGCACCATCAAT1377840.1549727986656305No Hit
GTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT1366450.15369170639308685No Hit
CTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT1346150.1514084602883778No Hit
AAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAAT1306620.14696231651896163No Hit
TTATATATCAAATCATCTTTATGCTATTCTGTAGGCACCATCAAT1287390.1447994188542545No Hit
AGGGGTGTATTTATTAGATTAAAAACCACTGTAGGCACCATCAAT1280990.1440795777177945No Hit
CGATGGGCCCCGCGTTCGATTCGCGGCTGGCGCACTGTAGGCACCATCAA1251740.1407896787738172No Hit
TTGGGTCGGGCCTTTTTTCCTGGAGAACCGCCTGTAGGCACCATCAAT1233830.13877524834350494No Hit
GTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAAT1226780.13798229834162326No Hit
TCGATGGGCCCCGCGTTCGATTCGCGGCTGGCGCTGTAGGCACCATCAAT1188890.13372061386342496No Hit
TCGCGTATTGTAATTTTAACACGCGCTGGACTGTAGGCACCATCAAT1181380.13287592527986017No Hit
TTGTTTTTTTACTTATTCAATTAAGCGGGGCCTGTAGGCACCATCAAT1177800.13247326414415286No Hit
GTAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAAT1172380.1318636486817133No Hit
CTTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT1140230.1282475717227776No Hit
GGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT1121610.12615328391638927No Hit
TAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAAT1101010.1238362952584087No Hit
CGCTCGAGACCCGGGTTCAATTCCCGGCGGGAGAGCCTGTAGGCACCATC1077280.12116725929462813No Hit
AACTGGTGATTCATAATAACTTCTCGAATCGCATCTGTAGGCACCATCAA1074440.120847829790324No Hit
CATTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT1063840.11965559290806214No Hit
AAATGGCTCAGTGAGGCTTCCGGACTGGCCCTGTAGGCACCATCAAT1058440.11904822694917402No Hit
TTGTAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAAT959170.10788281607161411No Hit
TTTCTGGAGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT948520.10668495543047365No Hit
GCGTATTGTAATTTTAACACGCGCTGGACTGTAGGCACCATCAAT935290.10519690883119778No Hit
AAAATCAGTTATAGTTTATTTGATAGTACCTGTAGGCACCATCAAT917910.10324209024499861No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)