FastQCFastQC Report
Sat 16 Sept 2023
SRR15359402_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR15359402_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences66367853
Total Bases3.1 Gbp
Sequences flagged as poor quality0
Sequence length35-76
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT62350289.394650750567447No Hit
TTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT58293628.783412053422913No Hit
ATTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT47298037.126647595485725No Hit
TGTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAAT42580756.4158697434434115No Hit
TTGTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAAT13775842.075679621578236No Hit
TCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT9377511.4129596749197235No Hit
TATTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT7931751.1951192695656434No Hit
AGTGAATCATCGAATCTTTGAACGCACCTGTAGGCACCATCAAT6711341.0112335561013253No Hit
ATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAAT6640351.0005371124481004No Hit
TGTAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAAT3995670.602049007069733No Hit
TGTAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAAT3664730.552184504145403No Hit
AAATGGCTCAGTGAGGCTTCCGGACTGGCCCTGTAGGCACCATCAAT3450110.5198465588452892No Hit
TATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAAT2789980.4203812348728532No Hit
AAATGGCTCAGTGAGGCTTCCGGACTGGCCCCTGTAGGCACCATCAAT2334500.35175162288284356No Hit
AAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAAT2312620.34845484605325416No Hit
GTTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT2262810.3409497064791293No Hit
GGCGCCGGTGAAATACCACTACTCCTATCTGTAGGCACCATCAAT2259200.3404057684373186No Hit
CTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT2099300.31631277871833524No Hit
GCCAAGGATGTTTTCATTAATCAGGAACGACTGTAGGCACCATCAAT2099030.3162720963717178No Hit
TTGGGTCGGGCCTTTTTTCCTGGAGAACCGCTGTAGGCACCATCAAT2094510.3155910437542706No Hit
TGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT2010580.3029448609705666No Hit
GTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT1678570.2529191354133454No Hit
AAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAAT1579740.23802788979779113No Hit
TAGTGAATCATCGAATCTTTGAACGCACCTGTAGGCACCATCAAT1538040.2317447273757673No Hit
AGTATCCTTTCATTCTTATGTGGGGGACTGTAGGCACCATCAAT1321970.1991883028067821No Hit
TGTTTTTTTACTTATTCAATTAAGCGGGGCCTGTAGGCACCATCAAT1283070.1933270313867167No Hit
GTAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAAT1237070.18639596492597102No Hit
ATAGGGAAGTTCCGTTTCAAAGGGGCACCTGTAGGCACCATCAAT1225440.1846436105142651No Hit
AAAATCAGTTATAGTTTATTTGATAGTACCTGTAGGCACCATCAAT1198850.1806371527492384No Hit
CTTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT1150490.1733504924439849No Hit
GTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAAT1118680.16855750931102143No Hit
GTAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAAT1068050.1609288159434659No Hit
GGGTCGGGCCTTTTTTCCTGGAGAACCGCTGTAGGCACCATCAAT1041190.15688167583182178No Hit
GCATAAGCATGGCAGGAAAGCTAAGTTAGTCACTGTAGGCACCATCAAT1009450.15209923997390726No Hit
GCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT985450.1484830313856921No Hit
GGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT972130.1464760356192327No Hit
TTTTGACCCGTTCGGCACCTTACGATAAATCCTGTAGGCACCATCAAT954450.14381209529258088No Hit
ACGGGGAGGTAGTGACAATAAATACTGACTGTAGGCACCATCAAT909890.1370980013471281No Hit
TAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAAT907360.13671679269178708No Hit
GGTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAAT869920.13107550729417147No Hit
GAATGGCTCAGTGAGGCTTCCGGACTGGCCCTGTAGGCACCATCAAT824060.1241655353835237No Hit
ATAGGGAAGTTCCGTTTCAAAGGGGCACTCTGTAGGCACCATCAAT820040.12355982044499768No Hit
TAGAGGTTATCAACATATGAACTCTTACTGTAGGCACCATCAAT803170.1210179271581981No Hit
CATTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT792460.1194041940757071No Hit
TAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAAT780770.11764279914253065No Hit
TGGCCGGAAAGCTATCCAAACTCGGTCATTCTGTAGGCACCATCAAT768130.115738262619404No Hit
TGAATGGCTCAGTGAGGCTTCCGGACTGGCCCTGTAGGCACCATCAAT743330.11200151374491502No Hit
TGCTTTGATACTTATGGTACCAACATTTACTGTAGGCACCATCAAT706230.1064114579689658No Hit
TGCTCGAGACCCGGGTTCAATTCCCGGCGGGAGACTGTAGGCACCATCAA686420.10342657913010989No Hit
TCAACAGCCCCGGGTTCGACTCCCGGTATCCGACTGTAGGCACCATCAAT671470.10117398253036752No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)