FastQCFastQC Report
Sat 16 Sept 2023
SRR15359403_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR15359403_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences84918424
Total Bases4 Gbp
Sequences flagged as poor quality0
Sequence length35-76
%GC47

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT67926527.9990321063895395No Hit
TTTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT65546317.718738397688586No Hit
ATTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT54652056.4358295203406035No Hit
TGTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAAT45857475.400179117784852No Hit
TTGTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAAT18571722.187007144645077No Hit
TCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT17949952.1137874626594577No Hit
ATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAAT13843051.6301586096322276No Hit
CTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT8811201.0376075750063378No Hit
TATTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT8787761.0348472788425749No Hit
TGTAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAAT8044710.9473456549311372No Hit
TGTAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAAT7188710.8465430305206795No Hit
TATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAAT6256430.7367576675704675No Hit
AAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAAT5139170.6051890459012759No Hit
AAATGGCTCAGTGAGGCTTCCGGACTGGCCCTGTAGGCACCATCAAT4093930.4821015048512911No Hit
TTGGGTCGGGCCTTTTTTCCTGGAGAACCGCTGTAGGCACCATCAAT3949510.46509459478428383No Hit
AAATGGCTCAGTGAGGCTTCCGGACTGGCCCCTGTAGGCACCATCAAT3218620.3790249333878358No Hit
TTGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAAT2734150.32197370973347317No Hit
TGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT2661500.3134184402668613No Hit
AAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAAT2644780.3114494918087505No Hit
ATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAAT2415450.284443573752617No Hit
GCCAAGGATGTTTTCATTAATCAGGAACGACTGTAGGCACCATCAAT2356740.2775298797349324No Hit
TAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAAT2331250.27452817541691543No Hit
GTTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT2212400.2605323904739448No Hit
GTAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAAT2153780.2536292948630323No Hit
GTAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAAT2060340.24262579343205898No Hit
GGCGCCGGTGAAATACCACTACTCCTATCTGTAGGCACCATCAAT2042730.24055203850697937No Hit
TGTTTTTTTACTTATTCAATTAAGCGGGGCCTGTAGGCACCATCAAT1972570.23228999162772968No Hit
GTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT1864780.21959663311697822No Hit
TGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAAT1744490.20543127366565353No Hit
ACGACCAGCGAATCCCTGGTGTTGTATGTCTGTAGGCACCATCAAT1698020.19995896296897833No Hit
AGTATCCTTTCATTCTTATGTGGGGGACTGTAGGCACCATCAAT1584060.18653902479395992No Hit
TCAACAGCCCCGGGTTCGACTCCCGGTATCCGACTGTAGGCACCATCAAT1516960.17863732374496258No Hit
TATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAAT1419000.16710154677387795No Hit
CGATGGGCCCCGCGTTCGATTCGCGGCTGGCGCCTGTAGGCACCATCAAT1405070.1654611489257031No Hit
TAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAAT1352920.1593199610016314No Hit
TGCTTTGATACTTATGGTACCAACATTTACTGTAGGCACCATCAAT1293330.1523026381177305No Hit
TCAACAGCCCCGGGTTCGACTCCCGGTATCCGCTGTAGGCACCATCAAT1278580.15056567700785403No Hit
GCATAAGCATGGCAGGAAAGCTAAGTTAGTCACTGTAGGCACCATCAAT1246690.14681030820826352No Hit
AACTGGTGATTCATAATAACTTCTCGAATCGCATCTGTAGGCACCATCAA1126270.13262963994715682No Hit
TGCTTTGATACTTATGGTACCAACATTTCTGTAGGCACCATCAAT1114550.13124949186527532No Hit
CTTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT1032970.1216426249267179No Hit
TGCTCGAGACCCGGGTTCAATTCCCGGCGGGAGACTGTAGGCACCATCAA1017230.11978908134234803No Hit
GTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAAT1001860.11797910898581913No Hit
TGCGTGGGTTCGAATCCCACTCCAGTCACCACTGTAGGCACCATCAAT996200.11731258695992758No Hit
GCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT985870.11609612538263782No Hit
TTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT985110.11600662772545096No Hit
TTGTAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAAT954520.11240434702368003No Hit
AGGGGTGTATTTATTAGATTAAAAACCACTGTAGGCACCATCAAT937530.11040360334525286No Hit
GGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT908420.10697560755484582No Hit
GGTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAAT864600.10181536105757215No Hit
CGCTCGAGACCCGGGTTCAATTCCCGGCGGGAGACTGTAGGCACCATCAA855390.10073079076455776No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)