FastQCFastQC Report
Sat 16 Sept 2023
SRR15359404_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR15359404_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences75183387
Total Bases3.6 Gbp
Sequences flagged as poor quality0
Sequence length35-76
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAAT1390428618.493827632426296No Hit
TTTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT56293147.487444001425475No Hit
TTGTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAAT49647596.603531974424085No Hit
TTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT46026936.121954840901222No Hit
ATTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT37701865.014653037645139No Hit
TCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT8331211.108118473034475No Hit
TATTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT6425020.8545797491139897No Hit
AAATGGCTCAGTGAGGCTTCCGGACTGGCCCTGTAGGCACCATCAAT6282540.8356287539958795No Hit
AACTGGTGATTCATAATAACTTCTCGAATCGCATCTGTAGGCACCATCAA5135730.6830937265436046No Hit
GTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAAT4453990.5924167795207204No Hit
TTGGGTCGGGCCTTTTTTCCTGGAGAACCGCTGTAGGCACCATCAAT4240350.5640009274921334No Hit
AAATGGCTCAGTGAGGCTTCCGGACTGGCCCCTGTAGGCACCATCAAT4035200.5367143142939277No Hit
CGATGGGCCCCGCGTTCGATTCGCGGCTGGCGCTGTAGGCACCATCAAT2797790.3721287523266277No Hit
GGTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAAT2596360.34533692928731713No Hit
CGCTCGAGACCCGGGTTCAATTCCCGGCGGGAGACTGTAGGCACCATCAA2341270.3114078912140524No Hit
TGCTCGAGACCCGGGTTCAATTCCCGGCGGGAGACTGTAGGCACCATCAA2295670.3053427215243708No Hit
GTGTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAAT2180390.29000954692291264No Hit
GGCGCCGGTGAAATACCACTACTCCTATCTGTAGGCACCATCAAT2066430.27485194302299787No Hit
GTTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT1970610.2621071061882328No Hit
TGTAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAAT1943490.258499926320159No Hit
TGTAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAAT1770230.23545494166151362No Hit
GGGTCGGGCCTTTTTTCCTGGAGAACCGCTGTAGGCACCATCAAT1731030.23024102385810313No Hit
TGTTTTTTTACTTATTCAATTAAGCGGGGCCTGTAGGCACCATCAAT1647270.21910026479653014No Hit
TGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT1540170.2048550965122122No Hit
GCCAAGGATGTTTTCATTAATCAGGAACGACTGTAGGCACCATCAAT1523480.20263519120254586No Hit
TGATTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAAT1391790.1851193535614457No Hit
TGTTTTTTTACTTATTCAATTAAGCGGGTCTGTAGGCACCATCAAT1273440.16937784407079187No Hit
GTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT1264240.16815416948427717No Hit
TGATCCTTTAGTCCCTCGAAATTTGAGGCTAGAGGTCTGTAGGCACCATC1221960.16253058671059872No Hit
ATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAAT1191510.1584804898454495No Hit
GAATGGCTCAGTGAGGCTTCCGGACTGGCCCTGTAGGCACCATCAAT1178570.1567593649378951No Hit
GGGTCGGGCCTTTTTTCCTGGAGAACCGCATGCCCCTGTAGGCACCATCA1139990.15162791216096716No Hit
GCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT1064890.14163900330800475No Hit
CTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT1028300.13677223666446417No Hit
AAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAAT1004610.13362127460418882No Hit
CTTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT997470.13267159671856762No Hit
CTGTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAAT972080.12929452087600152No Hit
TGAATGGCTCAGTGAGGCTTCCGGACTGGCCCTGTAGGCACCATCAAT929210.12359246331905745No Hit
TTGGGTCGGGCCTTTTTTCCTGGAGAACCGCCTGTAGGCACCATCAAT899780.11967803472328269No Hit
TTTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAAT882840.11742487738680887No Hit
TGTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAATAGAT855210.11374986338404786No Hit
ACTGGTGATTCATAATAACTTCTCGAATCGCATCTGTAGGCACCATCAAT850510.11312472528006753No Hit
GTAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAAT786500.10461087633628424No Hit
AACCCCGACTTCGGAAGGGGTGTATTTATTAGATTCTGTAGGCACCATCA785270.10444727636439151No Hit
GGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT764570.10169400854473344No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)