FastQCFastQC Report
Sat 16 Sept 2023
SRR15359405_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR15359405_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences67727162
Total Bases3.2 Gbp
Sequences flagged as poor quality0
Sequence length35-76
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAAT729164210.766200420445788No Hit
TTTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT679201310.028491966044584No Hit
TTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT66132399.764529923754962No Hit
ATTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT45557556.726629118166801No Hit
TTGTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAAT24353463.5958187647077255No Hit
TCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT8845081.305987101600389No Hit
TATTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT8319481.2283816055956989No Hit
AAATGGCTCAGTGAGGCTTCCGGACTGGCCCTGTAGGCACCATCAAT4514820.6666188079754471No Hit
TTGGGTCGGGCCTTTTTTCCTGGAGAACCGCTGTAGGCACCATCAAT4095110.6046481026327369No Hit
GGCGCCGGTGAAATACCACTACTCCTATCTGTAGGCACCATCAAT3620790.5346141626309397No Hit
TGTAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAAT3128450.46191954713826633No Hit
AAATGGCTCAGTGAGGCTTCCGGACTGGCCCCTGTAGGCACCATCAAT2951610.4358089004231419No Hit
TGTAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAAT2567530.37909900905046046No Hit
GTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAAT2302800.34001129413927017No Hit
TGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT2291990.33841518414724064No Hit
GCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT2211840.3265809366115178No Hit
GTCTAGTGGTATGATTCTCGCTTCTGTAGGCACCATCAAT2176850.32141461944027716No Hit
GCCAAGGATGTTTTCATTAATCAGGAACGACTGTAGGCACCATCAAT2073980.30622573554757837No Hit
TGCTTTGATACTTATGGTACCAACATTTACTGTAGGCACCATCAAT1712350.25283061469488416No Hit
AGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT1691580.24976389827171555No Hit
GTTTAGTGGTAAAATCCATCGTCTGTAGGCACCATCAAT1604290.2368754208245135No Hit
CGATGGGCCCCGCGTTCGATTCGCGGCTGGCGCCTGTAGGCACCATCAAT1573380.23231152074554667No Hit
CGCTCGAGACCCGGGTTCAATTCCCGGCGGGAGACTGTAGGCACCATCAA1482240.21885458599313523No Hit
GGGTCGGGCCTTTTTTCCTGGAGAACCGCTGTAGGCACCATCAAT1452010.2143910887628807No Hit
GTAATGGATATAAAGCTTATGTTTATATACTGTAGGCACCATCAAT1374840.20299684194651477No Hit
GGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT1337480.19748059131726203No Hit
TGTTTTTTTACTTATTCAATTAAGCGGGGCCTGTAGGCACCATCAAT1256550.18553117580801629No Hit
AAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAAT1230470.18168043125740305No Hit
ATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAAT1171360.17295276598183754No Hit
GTAATGGATATAAAGCTTATGTTTATATATCTGTAGGCACCATCAAT1107160.16347355585341078No Hit
GAATGGCTCAGTGAGGCTTCCGGACTGGCCCTGTAGGCACCATCAAT1054350.15567609344091518No Hit
AGTATCCTTTCATTCTTATGTGGGGGACTGTAGGCACCATCAAT1034700.1527747464156257No Hit
TCAACAGCCCCGGGTTCGACTCCCGGTATCCGACTGTAGGCACCATCAAT995400.14697205236504668No Hit
TCAACAGCCCCGGGTTCGACTCCCGGTATCCGCTGTAGGCACCATCAAT973760.14377687935602557No Hit
TGCTCGAGACCCGGGTTCAATTCCCGGCGGGAGACTGTAGGCACCATCAA968990.14307258290255837No Hit
GCCAAGGATGTTTTCATTAATCAGGAACGCTGTAGGCACCATCAAT911730.13461807243598956No Hit
TTTCTGGCGAGCATGCCTGTTCGAGAGTCATTCTGTAGGCACCATCAAT850740.12561282281398414No Hit
CGATGGGCCCCGCGTTCGATTCGCGGCTGGCGCTGTAGGCACCATCAAT848450.12527470145582065No Hit
GTTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT842150.12434449859275072No Hit
GCATAAGCATGGCAGGAAAGCTAAGTTAGTCACTGTAGGCACCATCAAT819770.12104006366013091No Hit
TTCTGGCGAGCATGCCTGTTCGAGAGTCATTCTGTAGGCACCATCAAT818060.12078758002586909No Hit
CTTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT764510.1128808556897748No Hit
TGAATGGCTCAGTGAGGCTTCCGGACTGGCCCTGTAGGCACCATCAAT755950.11161696100598457No Hit
CATTCTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT750500.11081226170380504No Hit
TTTCTGGAGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT719390.10621883137521694No Hit
GTGTTTTTTTACTTATTCAATTAAGCGGGGCTGTAGGCACCATCAAT702520.10372795481966306No Hit
CTGGCGAGCATGCCTGTTCGAGCGTCATTCTGTAGGCACCATCAAT687380.10149251492333312No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)