FastQCFastQC Report
Sat 23 Sept 2023
SRR15424374.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR15424374.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences135184670
Total Bases20.2 Gbp
Sequences flagged as poor quality0
Sequence length150
%GC58

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGCCGCCGGTGAAATACCACTACTCTTATCGTTTCCTCACTTACCCG10165830.7519957699345643No Hit
GGGTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGTAAAAA9747580.7210566109308104No Hit
CCGTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGTAAAAA8719310.6449925128344804No Hit
CCCCCCCGGGTGGGATCCCCCCGCCCCGGCGGGGGGCGCACCACCGGCCC7416570.5486250770889923No Hit
CGGTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGTAAAAA7217240.5338800619922363No Hit
GGGTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAAAAAAAAAAAAA6818780.5044048263756534No Hit
CCGCGAGGGCGAGGGACCTGTGGCGTACGGAGGGCCGCAAAAAAAAAAAA6428900.47556427810934476No Hit
CCGTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAAAAAAAAAAAAA6130020.45345526234594496No Hit
CGCTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGTAAAAA5582740.4129713820361436No Hit
CCCTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGTAAAAA5520170.40834289864375894No Hit
CCCCCCGGGTGGGATCCCCCCGCCCCGGCGGGGGGCGCACCACCGGCCCG5357110.39628088007316215No Hit
GCGTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGTAAAAA5277090.39036156984368126No Hit
CCGGGCCGCCGGTGAAATACCACTACTCTTATCGTTTCCTCACTTACCCG5236920.3873900790673972No Hit
CGGTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAAAAAAAAAAAAA5060560.37434422113099064No Hit
CCCCCCGGGGACGCGTGCATTTATCAAAAAAAAAAAAAAAGATCGGAAGA4691520.3470452677807328No Hit
GCCTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGTAAAAA4513830.3339010259077453No Hit
GCGCGAGGGCGAGGGACCTGTGGCGTACGGAGGGCCGCAAAAAAAAAAAA4396500.3252217873520718No Hit
GGGCGAGGGCGAGGGACCTGTGGCGTACGGAGGGCCGCAAAAAAAAAAAA4390180.3247542787211006No Hit
CCGCGCCCCCGCTCGACCGAAAGGGAGTCGGGTCCAGATCCCCGAGCCCG4327360.32010730210755406No Hit
CGCCCCCGGGTGGGATCCCCCCGCCCCGGCGGGGGGCGCACCACCGGCCC4315990.3192662304091137No Hit
GGCTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGTAAAAA4281920.3167459742291785No Hit
GCGGGCCGCCGGTGAAATACCACTACTCTTATCGTTTCCTCACTTACCCG4213070.3116529411212085No Hit
GGGTGGCGGCGTCCGGTGAGCTCTCGTCGGCCCTTGAAAATCCGGGGGAG4207470.3112386929671833No Hit
CGGCGAGGGCGAGGGACCTGTGGCGTACGGAGGGCCGCAAAAAAAAAAAA4168960.30838999717941395No Hit
GGGGGCGGCGTCCGGTGAGCTCTCGTCGGCCCTTGAAAATCCGGGGGAGA4107730.30386063745245667No Hit
CGCCCCGGGGACGCGTGCATTTATCAAAAAAAAAAAAAAAGATCGGAAGA4006800.2963945542049997No Hit
CGCTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAAAAAAAAAAAAA3825690.28299732506651826No Hit
CCCTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAAAAAAAAAAAAA3806570.28158296351206097No Hit
GCGTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAAAAAAAAAAAAA3746830.27716382338322826No Hit
CCCCCCATTGAATACCCCAGCTAGGAATAATGGAATAGGACCCCGGAAAA3731170.2760054080096508No Hit
CCCCCCGGGGACGCGTGCATTTATCAGAAAAAAAAAAAAAAAGATCGGAA3664650.27108473172290914No Hit
CCGTGGCGGCGTCCGGTGAGCTCTCGTCGGCCCTTGAAAATCCGGGGGAG3639250.2692058204528664No Hit
CGCTGGCGGCGTCCGGTGAGCTCTCGTCGGCCCTTGAAAATCCGGGGGAG3487090.25795010632492577No Hit
CCGCATCCCGGGGCCACGCCTGTCTGAGGGTCGCCAAAAAAAAAAAAAAA3484150.25773262604406255No Hit
CGGGCCGCCGGTGAAATACCACTACTCTTATCGTTTCCTCACTTACCCGG3483420.25767862583827No Hit
GCGCGCCCCCGCTCGACCGAAAGGGAGTCGGGTCCAGATCCCCGAGCCCG3454770.25555930269312344No Hit
GGGCGCCCCCGCTCGACCGAAAGGGAGTCGGGTCCAGATCCCCGAGCCCG3424190.2532972118806075No Hit
CCCCCCCCGGGTGGGATCCCCCCGCCCCGGCGGGGGGCGCACCACCGGCC3376790.24979089714832312No Hit
CGGCGCCCCCGCTCGACCGAAAGGGAGTCGGGTCCAGATCCCCGAGCCCG3362490.24873308489786602No Hit
GGGTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGAAAAAA3360880.2486139885535838No Hit
CGCCCCCCGGGTGGGATCCCCCCGCCCCGGCGGGGGGCGCACCACCGGCC3346240.24753102552234657No Hit
GCCCCCCCGGGTGGGATCCCCCCGCCCCGGCGGGGGGCGCACCACCGGCC3302310.24428139669978852No Hit
GGCCCCGGGGACGCGTGCATTTATCAAAAAAAAAAAAAAAGATCGGAAGA3265300.2415436602389901No Hit
GCCCCCGGGGACGCGTGCATTTATCAAAAAAAAAAAAAAAGATCGGAAGA3188310.2358484878499907No Hit
CGCCCCGGGGACGCGTGCATTTATCAGAAAAAAAAAAAAAAAGATCGGAA3168820.23440675632821384No Hit
CGCCGAGGGCGAGGGACCTGTGGCGTACGGAGGGCCGCAAAAAAAAAAAA3154070.2333156562796654No Hit
GCCTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAAAAAAAAAAAAA3141900.2324154062735072No Hit
GGGTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGCAAAAA3128240.2314049366692244No Hit
CCCCGAGGGCGAGGGACCTGTGGCGTACGGAGGGCCGCAAAAAAAAAAAA3102840.2295260253991817No Hit
CCGTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGAAAAAA3017470.2232109602368375No Hit
CGGTGGCGGCGTCCGGTGAGCTCTCGTCGGCCCTTGAAAATCCGGGGGAG3007330.2224608751865134No Hit
CGCCGCCCCCGCTCGACCGAAAGGGAGTCGGGTCCAGATCCCCGAGCCCG2967640.21952489139486006No Hit
GGCTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAAAAAAAAAAAAA2957670.218787381734926No Hit
CCCTGGCGGCGTCCGGTGAGCTCTCGTCGGCCCTTGAAAATCCGGGGGAG2955750.2186453537964031No Hit
CCGGGCGGCGTCCGGTGAGCTCTCGTCGGCCCTTGAAAATCCGGGGGAGA2927720.2165718938397379No Hit
CCCCCCATTGAATACCCCAGCTAGGAATAATGGAATAGGACCCCAAAAAA2902860.21473292792740478No Hit
GGCCCCCGGGTGGGATCCCCCCGCCCCGGCGGGGGGCGCACCACCGGCCC2884630.2133844022402836No Hit
CCGTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGCAAAAA2818510.20849331510740085No Hit
GCCCCCCGGGTGGGATCCCCCCGCCCCGGCGGGGGGCGCACCACCGGCCC2796120.2068370622201467No Hit
GGCTGGCGGCGTCCGGTGAGCTCTCGTCGGCCCTTGAAAATCCGGGGGAG2785970.20608623744097612No Hit
CGGCATCCCGGGGCCACGCCTGTCTGAGGGTCGCCAAAAAAAAAAAAAAA2744320.203005266795414No Hit
GCCTGGCGGCGTCCGGTGAGCTCTCGTCGGCCCTTGAAAATCCGGGGGAG2703820.20000936496719635No Hit
CCCCCCATTGAATACCCCAGCTAGGAATAATGGAATAGGACCCCGAAAAA2700930.1997955833305655No Hit
GCCCGAGGGCGAGGGACCTGTGGCGTACGGAGGGCCGCAAAAAAAAAAAA2683650.19851733188385934No Hit
GCGTGGCGGCGTCCGGTGAGCTCTCGTCGGCCCTTGAAAATCCGGGGGAG2656600.19651636535414851No Hit
GGCCGAGGGCGAGGGACCTGTGGCGTACGGAGGGCCGCAAAAAAAAAAAA2655790.19645644731758416No Hit
CCCCGCCCCCGCTCGACCGAAAGGGAGTCGGGTCCAGATCCCCGAGCCCG2599170.19226810258885124No Hit
GGCCCCGGGGACGCGTGCATTTATCAGAAAAAAAAAAAAAAAGATCGGAA2554020.1889282268470234No Hit
GCCCCCGGGGACGCGTGCATTTATCAGAAAAAAAAAAAAAAAGATCGGAA2501630.18505278742034875No Hit
CGGTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGAAAAAA2484220.18376491949863843No Hit
GGGCATCCCGGGGCCACGCCTGTCTGAGGGTCGCCAAAAAAAAAAAAAAA2480420.1834838225369785No Hit
GCCCGCCCCCGCTCGACCGAAAGGGAGTCGGGTCCAGATCCCCGAGCCCG2474600.18305330034833092No Hit
GGCCGCCCCCGCTCGACCGAAAGGGAGTCGGGTCCAGATCCCCGAGCCCG2474590.18305256061948444No Hit
GCGCATCCCGGGGCCACGCCTGTCTGAGGGTCGCCAAAAAAAAAAAAAAA2459840.18196146057093604No Hit
GGCCCCCCGGGTGGGATCCCCCCGCCCCGGCGGGGGGCGCACCACCGGCC2458370.18185272043050443No Hit
CGGTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGCAAAAA2337750.17293011108434114No Hit
CGCCCCATTGAATACCCCAGCTAGGAATAATGGAATAGGACCCCGGAAAA2317070.17140035182983396No Hit
CCGGCGTTTACTTTGAAAAAATTAGAGTGTTCAAGGCAGGGCCAAAAAAA2233840.16524358864063507No Hit
GCGGGCGGCGTCCGGTGAGCTCTCGTCGGCCCTTGAAAATCCGGGGGAGA2197830.162579825064484No Hit
CGGGGCCGCCGGTGAAATACCACTACTCTTATCGTTTCCTCACTTACCCG2196070.16244963278750468No Hit
CCCCGTTTACTTTGAAAAAATTAGAGTGTTCAAGGCAGGGCCAAAAAAAA2190410.16203094626040068No Hit
CCCCATCCCGGGGCCACGCCTGTCTGAGGGTCGCCAAAAAAAAAAAAAAA2108940.15600437534818112No Hit
GGGTGCCGAGGGCGAGGGACCTGTGGCGTACGGAGGGCCGCAAAAAAAAA2092370.15477864464957453No Hit
GGGGGAGCGTTTACTTTGAAAAAATTAGAGTGTTCAAGGCAGGGCCAAAA2066160.1528398153429675No Hit
CGCTGCCGAGGGCGAGGGACCTGTGGCGTACGGAGGGCCGCAAAAAAAAA2063860.1526696777082786No Hit
CCGCGAGGGCGAGGGACCTGTGGCGTACGGAGGAAAAAAAAAAAAAAAGA2028050.15002070870905704No Hit
CGCGAGGGCGAGGGACCTGTGGCGTACGGAGGGCCGCAAAAAAAAAAAAA2016180.14914265056829298No Hit
CGCCCCATTGAATACCCCAGCTAGGAATAATGGAATAGGACCCCAAAAAA1986830.1469715464038933No Hit
CCCCCCCCGCTCGACCGAAAGGGAGTCGGGTCCAGATCCCCGAGCCCGGA1985610.14688129948462353No Hit
CCCCCGGGGACGCGTGCATTTATCAAAAAAAAAAAAAAAGATCGGAAGAG1957160.14477677091640642No Hit
CGCCATCCCGGGGCCACGCCTGTCTGAGGGTCGCCAAAAAAAAAAAAAAA1938500.1433964368888869No Hit
CCCCGTCGGGCTTTACAGCGCCCTCCCGCCCCGACTTCGCCGCTTGCAAA1915430.14168988244007255No Hit
CGCTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGAAAAAA1894400.14013423267593877No Hit
CCCTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGAAAAAA1882230.13923398266978054No Hit
CGGTGCCGAGGGCGAGGGACCTGTGGCGTACGGAGGGCCGCAAAAAAAAA1852830.13705917986114846No Hit
GCCCATCCCGGGGCCACGCCTGTCTGAGGGTCGCCAAAAAAAAAAAAAAA1819760.13461289656586062No Hit
GCGTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGAAAAAA1816200.13434955309651603No Hit
GCCCCCGGGTGGGATCCCCCCGCCCCGGCGGGGGGCGCACCACCGGCCCG1804840.13350922112692215No Hit
CCCTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGCAAAAA1769930.1309268277238832No Hit
CGCTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGCAAAAA1766990.13070934744301999No Hit
CGCCCCATTGAATACCCCAGCTAGGAATAATGGAATAGGACCCCGAAAAA1748710.12935712311166642No Hit
GCCCCCATTGAATACCCCAGCTAGGAATAATGGAATAGGACCCCGGAAAA1708860.12640930365846956No Hit
GCGTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGCAAAAA1677870.1241168839632482No Hit
CGGGGCGGCGTCCGGTGAGCTCTCGTCGGCCCTTGAAAATCCGGGGGAGA1676140.12398891087280828No Hit
CCGGGAGCGTTTACTTTGAAAAAATTAGAGTGTTCAAGGCAGGGCCAAAA1654120.12236002795287365No Hit
GGCCCCATTGAATACCCCAGCTAGGAATAATGGAATAGGACCCCGGAAAA1651360.12215586279124696No Hit
GCCCCCCCGCTCGACCGAAAGGGAGTCGGGTCCAGATCCCCGAGCCCGGA1650670.1221048215008403No Hit
CGCGTTTACTTTGAAAAAATTAGAGTGTTCAAGGCAGGGCCAAAAAAAAA1646860.1218229848103339No Hit
CCGCGTTTACTTTGAAAAAATTAGAGTGTTCAAGGCAGGGCCAAAAAAAA1613900.11938483853235725No Hit
CCGTGCCGAGGGCGAGGGACCTGTGGCGTACGGAGGGCCGCAAAAAAAAA1611190.11918437201496293No Hit
CCCCCATTGAATACCCCAGCTAGGAATAATGGAATAGGACCCCGGAAAAA1594000.11791277812787501No Hit
CCCCCCCATTGAATACCCCAGCTAGGAATAATGGAATAGGACCCCGGAAA1552920.11487397202656188No Hit
CCCTGCCGAGGGCGAGGGACCTGTGGCGTACGGAGGGCCGCAAAAAAAAA1543750.1141956406743457No Hit
CCCCTGGCGGCGTCCGGTGAGCTCTCGTCGGCCCTTGAAAATCCGGGGGA1539400.11387385862612971No Hit
GCCTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGAAAAAA1536070.11362752892025406No Hit
CCCCCGGGGACGCGTGCATTTATCAGAAAAAAAAAAAAAAAGATCGGAAG1488980.11014414578221036No Hit
GGCTGCCGAGGGCGAGGGACCTGTGGCGTACGGAGGGCCGCAAAAAAAAA1476210.10919951204526371No Hit
GGCCATCCCGGGGCCACGCCTGTCTGAGGGTCGCCAAAAAAAAAAAAAAA1469480.10870167453158705No Hit
GGCTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGAAAAAA1460050.10800411022936256No Hit
GGGGGGCGAGGGACCTGTGGCGTACGGAGGGCCGCAAAAAAAAAAAAAAA1459180.10793975381971936No Hit
GGGGGAGCGCCGCGACCGGCTCCGGTTCGGCTTGGAAGGGTCAGGGGGCG1436170.10623763774398384No Hit
GCCTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGCAAAAA1434150.10608821251699621No Hit
CCGCATTGAATACCCCAGCTAGGAAAAAAAAAAAAAAAGATCGGAAGAGC1428820.10569393704182581No Hit
GCCTGCCGAGGGCGAGGGACCTGTGGCGTACGGAGGGCCGCAAAAAAAAA1424070.10534256583975092No Hit
GGCCCCATTGAATACCCCAGCTAGGAATAATGGAATAGGACCCCAAAAAA1417700.10487135856454731No Hit
GCGCGAGGGCGAGGGACCTGTGGCGTACGGAGGAAAAAAAAAAAAAAAGA1413130.1045333024817089No Hit
CCCCCATTGAATACCCCAGCTAGGAATAATGGAATAGGACCCCAAAAAAA1409880.10429289060660502No Hit
CCCGTTTACTTTGAAAAAATTAGAGTGTTCAAGGCAGGGCCAAAAAAAAA1392310.10299318702335108No Hit
CCCCCCGGGGACGCGTGCATTTACCAAAAAAAAAAAAAAAGATCGGAAGA1389290.10276978891171609No Hit
CGCCGTCGGGCTTTACAGCGCCCTCCCGCCCCGACTTCGCCGCTTGCAAA1388860.10273798057131774No Hit
CCGCGCCCCATTGAATACCCCAGCTAGGAATAATGGAATAGGACCCCGGA1383180.1023178145865208No Hit
GCCCCCATTGAATACCCCAGCTAGGAATAATGGAATAGGACCCCAAAAAA1378400.10196422419790646No Hit
GGGCGAGGGCGAGGGACCTGTGGCGTACGGAGGAAAAAAAAAAAAAAAGA1357420.10041227307800507No Hit
GGCTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGCAAAAA1353290.10010676506441152No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)