FastQCFastQC Report
Thu 14 Sept 2023
SRR15424375.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR15424375.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences84299906
Total Bases12.6 Gbp
Sequences flagged as poor quality0
Sequence length150
%GC57

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGTAAAAA6880250.816163424903463No Hit
GGGGGCCGCCGGTGAAATACCACTACTCTTATCGTTTCCTCACTTACCCG6351400.7534290726255377No Hit
CCGTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGTAAAAA6287280.7458228956981281No Hit
CGGTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGTAAAAA5145430.6103719736057593No Hit
CCCCCCCGGGTGGGATCCCCCCGCCCCGGCGGGGGGCGCACCACCGGCCC5093960.604266391471421No Hit
GGGTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAAAAAAAAAAAAA4852760.5756542599228995No Hit
CCGTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAAAAAAAAAAAAA4375720.5190658219713792No Hit
CCGCGAGGGCGAGGGACCTGTGGCGTACGGAGGGCCGCAAAAAAAAAAAA4202940.49856995095581724No Hit
CGCTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGTAAAAA4097710.4860871375111616No Hit
CCCTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGTAAAAA4073270.48318796464612906No Hit
GCGTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGTAAAAA3775830.4479044140333917No Hit
CCCCCCGGGTGGGATCCCCCCGCCCCGGCGGGGGGCGCACCACCGGCCCG3664730.43472527715511333No Hit
CGGTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAAAAAAAAAAAAA3582500.42497081787967833No Hit
CCGGGCCGCCGGTGAAATACCACTACTCTTATCGTTTCCTCACTTACCCG3353280.39777980298103777No Hit
GCCTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGTAAAAA3249560.3854761119187962No Hit
GGCTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGTAAAAA3066660.3637797650687772No Hit
CGCCCCCGGGTGGGATCCCCCCGCCCCGGCGGGGGGCGCACCACCGGCCC2933690.348006319247853No Hit
GGGCGAGGGCGAGGGACCTGTGGCGTACGGAGGGCCGCAAAAAAAAAAAA2878670.3414796215787002No Hit
GCGCGAGGGCGAGGGACCTGTGGCGTACGGAGGGCCGCAAAAAAAAAAAA2845850.3375863788033168No Hit
CGCTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAAAAAAAAAAAAA2791810.3311759327465917No Hit
CCCCCCATTGAATACCCCAGCTAGGAATAATGGAATAGGACCCCGGAAAA2778420.3295875561237281No Hit
CCCTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAAAAAAAAAAAAA2768260.3283823353254985No Hit
CCGCGCCCCCGCTCGACCGAAAGGGAGTCGGGTCCAGATCCCCGAGCCCG2742660.32534555851106167No Hit
GGGTGGCGGCGTCCGGTGAGCTCTCGTCGGCCCTTGAAAATCCGGGGGAG2738690.3248746208566354No Hit
CGGCGAGGGCGAGGGACCTGTGGCGTACGGAGGGCCGCAAAAAAAAAAAA2728850.3237073597685862No Hit
GGGGGCGGCGTCCGGTGAGCTCTCGTCGGCCCTTGAAAATCCGGGGGAGA2721930.3228864810359338No Hit
GCGGGCCGCCGGTGAAATACCACTACTCTTATCGTTTCCTCACTTACCCG2671020.31684732839441127No Hit
GCGTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAAAAAAAAAAAAA2646140.3138959609278805No Hit
GGGTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGAAAAAA2441750.289650382291055No Hit
CCGTGGCGGCGTCCGGTGAGCTCTCGTCGGCCCTTGAAAATCCGGGGGAG2392160.2837678134540269No Hit
GGGTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGCAAAAA2383600.28275239120669954No Hit
CCGCATCCCGGGGCCACGCCTGTCTGAGGGTCGCCAAAAAAAAAAAAAAA2326260.2759504856387385No Hit
CCCCCCCCGGGTGGGATCCCCCCGCCCCGGCGGGGGGCGCACCACCGGCC2321680.2754071872867806No Hit
CGCCCCCCGGGTGGGATCCCCCCGCCCCGGCGGGGGGCGCACCACCGGCC2301750.2730430090871038No Hit
CGCTGGCGGCGTCCGGTGAGCTCTCGTCGGCCCTTGAAAATCCGGGGGAG2293140.27202165563506087No Hit
GCCCCCCCGGGTGGGATCCCCCCGCCCCGGCGGGGGGCGCACCACCGGCC2273930.26974288678329017No Hit
GCCTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAAAAAAAAAAAAA2242680.2660358838359796No Hit
CCGTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGAAAAAA2235600.26519602524823693No Hit
CCCCCCGGGGACGCGTGCATTTATCAAAAAAAAAAAAAAAGATCGGAAGA2215470.2628081222296974No Hit
CCCCCCATTGAATACCCCAGCTAGGAATAATGGAATAGGACCCCAAAAAA2212790.26249020965693604No Hit
CCGTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGCAAAAA2211770.26236921308073585No Hit
GGGCGCCCCCGCTCGACCGAAAGGGAGTCGGGTCCAGATCCCCGAGCCCG2190090.2597974427160097No Hit
CGGGCCGCCGGTGAAATACCACTACTCTTATCGTTTCCTCACTTACCCGG2183100.25896826029675524No Hit
GCGCGCCCCCGCTCGACCGAAAGGGAGTCGGGTCCAGATCCCCGAGCCCG2169930.25740598097464074No Hit
CGGCGCCCCCGCTCGACCGAAAGGGAGTCGGGTCCAGATCCCCGAGCCCG2162530.2565281626767176No Hit
CGCCGAGGGCGAGGGACCTGTGGCGTACGGAGGGCCGCAAAAAAAAAAAA2127210.25233835966554935No Hit
GGCTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAAAAAAAAAAAAA2104590.24965508265216807No Hit
CCCCCCGGGGACGCGTGCATTTATCAGAAAAAAAAAAAAAAAGATCGGAA2051980.24341426905031188No Hit
CCCCCCATTGAATACCCCAGCTAGGAATAATGGAATAGGACCCCGAAAAA2045400.24263372250972617No Hit
CCCCGAGGGCGAGGGACCTGTGGCGTACGGAGGGCCGCAAAAAAAAAAAA2018340.23942375451759104No Hit
CGGTGGCGGCGTCCGGTGAGCTCTCGTCGGCCCTTGAAAATCCGGGGGAG1932690.22926360083960237No Hit
GGCCCCCGGGTGGGATCCCCCCGCCCCGGCGGGGGGCGCACCACCGGCCC1931170.22908329221624518No Hit
CCGGCGTTTACTTTGAAAAAATTAGAGTGTTCAAGGCAGGGCCAAAAAAA1923570.22818174909945924No Hit
CCCTGGCGGCGTCCGGTGAGCTCTCGTCGGCCCTTGAAAATCCGGGGGAG1923340.22815446555776706No Hit
GCCCCCCGGGTGGGATCCCCCCGCCCCGGCGGGGGGCGCACCACCGGCCC1922520.2280571938004296No Hit
CCGGGCGGCGTCCGGTGAGCTCTCGTCGGCCCTTGAAAATCCGGGGGAGA1913130.22694331355482175No Hit
CGCCGCCCCCGCTCGACCGAAAGGGAGTCGGGTCCAGATCCCCGAGCCCG1858510.2204640655233945No Hit
CGCCCCGGGGACGCGTGCATTTATCAAAAAAAAAAAAAAAGATCGGAAGA1858480.22046050680056511No Hit
CGGTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGAAAAAA1830690.21716394321958082No Hit
CGGCATCCCGGGGCCACGCCTGTCTGAGGGTCGCCAAAAAAAAAAAAAAA1829370.21700735941508642No Hit
GGCTGGCGGCGTCCGGTGAGCTCTCGTCGGCCCTTGAAAATCCGGGGGAG1810280.21474282545463336No Hit
CGGTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGCAAAAA1795900.21303701097839894No Hit
GCCCGAGGGCGAGGGACCTGTGGCGTACGGAGGGCCGCAAAAAAAAAAAA1765080.20938101639164344No Hit
GGCCGAGGGCGAGGGACCTGTGGCGTACGGAGGGCCGCAAAAAAAAAAAA1748750.20744388493149682No Hit
CGCCCCGGGGACGCGTGCATTTATCAGAAAAAAAAAAAAAAAGATCGGAA1736780.206023954522559No Hit
GCGTGGCGGCGTCCGGTGAGCTCTCGTCGGCCCTTGAAAATCCGGGGGAG1723870.2044925174649661No Hit
CGCCCCATTGAATACCCCAGCTAGGAATAATGGAATAGGACCCCGGAAAA1715290.2034747227357525No Hit
GCCTGGCGGCGTCCGGTGAGCTCTCGTCGGCCCTTGAAAATCCGGGGGAG1704430.20218646507150317No Hit
GGCCCCCCGGGTGGGATCCCCCCGCCCCGGCGGGGGGCGCACCACCGGCC1647540.19543794034598327No Hit
GGGCATCCCGGGGCCACGCCTGTCTGAGGGTCGCCAAAAAAAAAAAAAAA1639450.19447827142298355No Hit
CCCCGCCCCCGCTCGACCGAAAGGGAGTCGGGTCCAGATCCCCGAGCCCG1632840.19369416615956841No Hit
GCGCATCCCGGGGCCACGCCTGTCTGAGGGTCGCCAAAAAAAAAAAAAAA1613810.19143674964477422No Hit
CCCCGTTTACTTTGAAAAAATTAGAGTGTTCAAGGCAGGGCCAAAAAAAA1590360.1886550146331124No Hit
GCCCCCGGGGACGCGTGCATTTATCAAAAAAAAAAAAAAAGATCGGAAGA1579710.187391668028669No Hit
GGCCCCGGGGACGCGTGCATTTATCAAAAAAAAAAAAAAAGATCGGAAGA1579420.18735726704131794No Hit
GGCCGCCCCCGCTCGACCGAAAGGGAGTCGGGTCCAGATCCCCGAGCCCG1537660.18240352486276792No Hit
GCCCGCCCCCGCTCGACCGAAAGGGAGTCGGGTCCAGATCCCCGAGCCCG1533260.18188157884778663No Hit
CGCCCCATTGAATACCCCAGCTAGGAATAATGGAATAGGACCCCAAAAAA1513920.17958738886375508No Hit
GGCCCCGGGGACGCGTGCATTTATCAGAAAAAAAAAAAAAAAGATCGGAA1458890.17305950495365913No Hit
GCCCCCGGGGACGCGTGCATTTATCAGAAAAAAAAAAAAAAAGATCGGAA1449040.17189105762466686No Hit
CCCTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGAAAAAA1436330.17038334538593672No Hit
CCCCATCCCGGGGCCACGCCTGTCTGAGGGTCGCCAAAAAAAAAAAAAAA1435620.17029912227897384No Hit
CGCTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGAAAAAA1434240.17013542102882062No Hit
GCGGGCGGCGTCCGGTGAGCTCTCGTCGGCCCTTGAAAATCCGGGGGAGA1431130.16976650009550426No Hit
CCCTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGCAAAAA1411530.1674414678469511No Hit
GGGGGAGCGTTTACTTTGAAAAAATTAGAGTGTTCAAGGCAGGGCCAAAA1410320.16729793269283122No Hit
CGCTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGCAAAAA1400430.16612474040006642No Hit
GGGTGCCGAGGGCGAGGGACCTGTGGCGTACGGAGGGCCGCAAAAAAAAA1396850.16570006614242253No Hit
CGCTGCCGAGGGCGAGGGACCTGTGGCGTACGGAGGGCCGCAAAAAAAAA1380140.16371785752643664No Hit
CGGGGCCGCCGGTGAAATACCACTACTCTTATCGTTTCCTCACTTACCCG1378860.1635660186857148No Hit
CGCGAGGGCGAGGGACCTGTGGCGTACGGAGGGCCGCAAAAAAAAAAAAA1346050.15967396215127452No Hit
GCGTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGAAAAAA1337480.1586573536630041No Hit
CCCCGTCGGGCTTTACAGCGCCCTCCCGCCCCGACTTCGCCGCTTGCAAA1313230.15578071937589114No Hit
CCCCCCCCGCTCGACCGAAAGGGAGTCGGGTCCAGATCCCCGAGCCCGGA1308390.15520657875941168No Hit
CGCCCCATTGAATACCCCAGCTAGGAATAATGGAATAGGACCCCGAAAAA1303250.154596850914638No Hit
GCGTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGCAAAAA1293310.1534177274171575No Hit
CGCCATCCCGGGGCCACGCCTGTCTGAGGGTCGCCAAAAAAAAAAAAAAA1285410.1524805970720774No Hit
GCCCCCATTGAATACCCCAGCTAGGAATAATGGAATAGGACCCCGGAAAA1255670.14895271650718092No Hit
CCGCGAGGGCGAGGGACCTGTGGCGTACGGAGGAAAAAAAAAAAAAAAGA1252110.1485304147314233No Hit
CGGTGCCGAGGGCGAGGGACCTGTGGCGTACGGAGGGCCGCAAAAAAAAA1246910.14791356944099085No Hit
GCCCCCGGGTGGGATCCCCCCGCCCCGGCGGGGGGCGCACCACCGGCCCG1241590.14728248925924067No Hit
GGCCCCATTGAATACCCCAGCTAGGAATAATGGAATAGGACCCCGGAAAA1217330.1444046687311846No Hit
GCCCATCCCGGGGCCACGCCTGTCTGAGGGTCGCCAAAAAAAAAAAAAAA1201770.14255887782365972No Hit
CCCCCATTGAATACCCCAGCTAGGAATAATGGAATAGGACCCCGGAAAAA1192090.14141059659070082No Hit
GGGGCGTTTACTTTGAAAAAATTAGAGTGTTCAAGGCAGGGCCAAAAAAA1187790.14090051298515088No Hit
CGCGTTTACTTTGAAAAAATTAGAGTGTTCAAGGCAGGGCCAAAAAAAAA1159490.13754345111606647No Hit
CCCCCCCATTGAATACCCCAGCTAGGAATAATGGAATAGGACCCCGGAAA1151030.13653989127817057No Hit
GCCTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGAAAAAA1133590.13447108707333552No Hit
CCGCGTTTACTTTGAAAAAATTAGAGTGTTCAAGGCAGGGCCAAAAAAAA1127510.1337498525799068No Hit
CGGGGCGGCGTCCGGTGAGCTCTCGTCGGCCCTTGAAAATCCGGGGGAGA1120740.13294676746140144No Hit
CCGGGAGCGTTTACTTTGAAAAAATTAGAGTGTTCAAGGCAGGGCCAAAA1101480.130662067404915No Hit
GCCTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGCAAAAA1092780.12963003778438376No Hit
CCCCCATTGAATACCCCAGCTAGGAATAATGGAATAGGACCCCAAAAAAA1077950.1278708424657081No Hit
GGCTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGAAAAAA1076670.12771900362498625No Hit
GGCCCCATTGAATACCCCAGCTAGGAATAATGGAATAGGACCCCAAAAAA1066290.1264876855260076No Hit
GCCCCCCCGCTCGACCGAAAGGGAGTCGGGTCCAGATCCCCGAGCCCGGA1051590.12474391133959271No Hit
CCGTGCCGAGGGCGAGGGACCTGTGGCGTACGGAGGGCCGCAAAAAAAAA1046910.12418875057820349No Hit
GGCTGCTGCGATCCATTGAAAGTCAGCCCTCGATCCAAGTTTTGCAAAAA1041410.12353631805947685No Hit
GCCCCCATTGAATACCCCAGCTAGGAATAATGGAATAGGACCCCAAAAAA1026700.12179135763211885No Hit
CCCTGCCGAGGGCGAGGGACCTGTGGCGTACGGAGGGCCGCAAAAAAAAA999430.11855647858017776No Hit
CCGCGCCCCATTGAATACCCCAGCTAGGAATAATGGAATAGGACCCCGGA998280.11842006087171675No Hit
CCCGTTTACTTTGAAAAAATTAGAGTGTTCAAGGCAGGGCCAAAAAAAAA997390.11831448542777734No Hit
CCCCTGGCGGCGTCCGGTGAGCTCTCGTCGGCCCTTGAAAATCCGGGGGA991690.1176383280901879No Hit
GGCCATCCCGGGGCCACGCCTGTCTGAGGGTCGCCAAAAAAAAAAAAAAA987580.11715078306255763No Hit
GGCTGCCGAGGGCGAGGGACCTGTGGCGTACGGAGGGCCGCAAAAAAAAA973260.11545208603198207No Hit
GGGGGGCGAGGGACCTGTGGCGTACGGAGGGCCGCAAAAAAAAAAAAAAA962400.1141638283677327No Hit
CGGGCGTTTACTTTGAAAAAATTAGAGTGTTCAAGGCAGGGCCAAAAAAA950790.1127866026327479No Hit
CGCCGTCGGGCTTTACAGCGCCCTCCCGCCCCGACTTCGCCGCTTGCAAA948920.11256477557638084No Hit
GCCCCCATTGAATACCCCAGCTAGGAATAATGGAATAGGACCCCGAAAAA928540.1101472165342628No Hit
GCCTGCCGAGGGCGAGGGACCTGTGGCGTACGGAGGGCCGCAAAAAAAAA918780.10898944537375878No Hit
CGCGTCGGGCTTTACAGCGCCCTCCCGCCCCGACTTCGCCGCTTGCAAAA910460.10800249290906683No Hit
GGCCCCATTGAATACCCCAGCTAGGAATAATGGAATAGGACCCCGAAAAA910080.10795741575322752No Hit
CCCCCATTGAATACCCCAGCTAGGAATAATGGAATAGGACCCCGAAAAAA903220.10714365446623392No Hit
CCGCGTCGGGCTTTACAGCGCCCTCCCGCCCCGACTTCGCCGCTTGCAAA895730.10625515999982255No Hit
CCCCCGGGGACGCGTGCATTTATCAAAAAAAAAAAAAAAGATCGGAAGAG881440.10456002169207637No Hit
CGGGGAGCGTTTACTTTGAAAAAATTAGAGTGTTCAAGGCAGGGCCAAAA866430.10277947403642419No Hit
GGGGGAGCGCCGCGACCGGCTCCGGTTCGGCTTGGAAGGGTCAGGGGGCG863210.10239750445273331No Hit
CGCCGTTTACTTTGAAAAAATTAGAGTGTTCAAGGCAGGGCCAAAAAAAA855600.10149477509500426No Hit
GCGCGAGGGCGAGGGACCTGTGGCGTACGGAGGAAAAAAAAAAAAAAAGA852440.10111992295697221No Hit
CGGCGTTTACTTTGAAAAAATTAGAGTGTTCAAGGCAGGGCCAAAAAAAA849020.10071422855441854No Hit
CCGCTGGCGGCGTCCGGTGAGCTCTCGTCGGCCCTTGAAAATCCGGGGGA846950.1004686766791887No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)