FastQCFastQC Report
Sat 16 Sept 2023
SRR15480790_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR15480790_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences44115556
Total Bases1.3 Gbp
Sequences flagged as poor quality0
Sequence length10-42
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTGAACCCCATTCGTGATGGGGATCGGGGATT1084895524.59213026806236No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCTGA27774146.295770136049061No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATTG12582052.852066513680571No Hit
GCCGATTTAGCTCAGCGGTAGAGCAGCTG7103061.6101032479336765No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCTG5557421.2597415750580134No Hit
CGTTGAACCCCATTCGTGATGGGGATCGGGGATT4876271.1053402568472672No Hit
CGTTGAACCCCATTCGTGATGGGGATCGGGGATTG4842821.0977578974636522No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATC4532731.0274674992195496No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCTGAATTT2857760.6477896368346803No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCC2335760.5294640285163809No Hit
GGCGGGGCGCGGGACATGTGGCGTA1815640.4115645737299559No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCTGAA1813800.41114748729450445No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTC1498160.33959902942173054No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCC1476670.3347277318685499No Hit
AGGACTCTAGAGATACTGCCTGG1453110.3293872120754865No Hit
GGCTCTGTAGCTCAGTAGGTAGAGCAACG1449270.3285167708188921No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGAT1426380.3233281248909115No Hit
GGACGCTACGCCGCGACGAGTAGGAGGGC1411710.3200027672778283No Hit
GACTCGTTAGCTCAGCCGGTAGAGCAACTG1212810.2749166303151659No Hit
AAGAACGAAAGTCGGAGGTTCGAAGACGATC1198420.2716547423770427No Hit
CGCGACCTCAGATC1148200.26027100281814425No Hit
CGGCCCGGACACGGACAGGATTGACAGA1101030.2495786293614887No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGC1041570.23610039052891002No Hit
AGACGTGGCGACCCGCTGA952300.21586489808719628No Hit
TGGGAATACCGGGTGCTGTAGGCTT906430.20546720526428364No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCTGAAT898080.20357444888601198No Hit
CAACTTCTTAGAGGGACAAGTGGCGT896060.20311656051665766No Hit
GCGACCTCAGATCAGACGTGGCGACCCGCTGA882350.200008813217723No Hit
TGCTTAGTTGAACAGGGCCCTGAAGC871270.1974972275085913No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCTGAATT798980.18111071749838084No Hit
TTGAACCCCATTCGTGATGGGGATCGGGGATT794960.1801994743078836No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCT734620.166521759354002No Hit
CAAGTGGTGGAGCATGTGGTTTAATTCG718850.16294705658929018No Hit
ACGGTGGCCATGGAAGTCGGAATCCGCT687540.15584978686429796No Hit
GTTGAGCCCCATTCGTGATGGGGATCGGGGATT649990.14733805009733983No Hit
CGGTGCGCCGCGACCGGCTCCGGGACGGCTGGG646640.14657868077192546No Hit
CCCCTTGTAAATTTAACTGTTAGTCCA645670.14635880368367113No Hit
TGGGGGGCCCAAGTCCTTCTGATCGAGGC640370.14515741340764243No Hit
TCCCTGGTGGTCTAGTGGTTAGGATTCGGCGCT625630.1418161883758192No Hit
AGTTGGTCCGAGTGTTGTGGGTTATTGTT594750.13481638993737266No Hit
GCCGTCTTAGCTCAGCTGGCAGAGCAACTG592890.13439476995370975No Hit
ATACCACCCTGAACGCGCCCGATCTCGT582510.13204185843197805No Hit
ATCGCATGATGAGTAATAGAAAGGAGCTT576360.1306477923569636No Hit
AGCTGCGAGAATTAATGTGAATTGC575590.13047325075082358No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGC566280.12836288405840335No Hit
CGGGACATGTGGCGTACGGAAGA560440.12703908798066604No Hit
CGGTCGGCGTCCAACTTCTTAGAGG548770.12439376259929717No Hit
GGTGCGCCGCGACCGGCTCCGGGACGGCTGGG546300.12383386939518568No Hit
AGGTCTGTGATGCCCTTAGATGTCCGGGGCTGC543490.1231969058714799No Hit
GTTGGACCCCATTCGTGATGGGGATCGGGGATT532780.1207691908042596No Hit
GTGGTGGAGCATGTGGTTTAATTCG516890.1171672867502792No Hit
GGACGCTACGCCGCGACGAGTAGGAGGG498650.11303269078145586No Hit
ATTGATCATCGACACTTCGAACGCA497190.11270174176202155No Hit
TCCCTGGTGGTCTAGTGGTTAGGATTCGG493780.11192877179197287No Hit
GTTTCCGTAGTGTAGTGGTTATCACGTTC492960.11174289631530429No Hit
GTTGAACCCCATTCGTGATGGGGAACGGGGATT488190.11066164506687845No Hit
CGACCTCAGATCAGACGTGGCGACCCGCTGA480660.10895476416527539No Hit
CGGCGGGGCGCGGGACATGTGGCGTA478900.10855581192266964No Hit
GTTTCCGTAGTGTAGTGGTTATC477690.10828153225587818No Hit
AAGAGGGCGTGAAACCGTTAAGAGGT474220.10749496164119522No Hit
GGTTCCATGGTGTAATGGTTAGCACTCTG472490.1071028097209066No Hit
TAGCTTATCAGACTGATGTTGAC462270.10478616658486635No Hit
CGCGCGCTACACTGACTGGCTCAGCGT461980.10472043013580062No Hit
GTTGAACCCCATTCGTGGTGGGGATCGGGGATT461620.10463882626799491No Hit
GTCGAACCCCATTCGTGATGGGGATCGGGGATT455610.10327649503046046No Hit
GCCATGGAAGTCGGAATCCGCT444990.1008691809301916No Hit
ACGGTGGCCATGGAAGTC442770.10036595707872298No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)