FastQCFastQC Report
Sat 16 Sept 2023
SRR15480791_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR15480791_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences37293581
Total Bases1.1 Gbp
Sequences flagged as poor quality0
Sequence length10-42
%GC60

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGCGACCTCAGATCAGACGTGGCGACCCGCTGA610396716.367339462520373No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCTGAA498657613.371137515595514No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATT23260056.2370116723304205No Hit
GCCGATTTAGCTCAGCGGTAGAGCAGCTG8924702.39309279524538No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCTG8780842.3545177922173792No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCC5159611.383511548542362No Hit
GCGACCTCAGATCAGACGTGGCGACCCGCTGA5133391.376480848004379No Hit
GCGACCTCAGATCAGACGTGGCGACCCGCTGAA4942791.3253728570608438No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCTGAAT3908991.0481669754374083No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCC3907141.0476709115169176No Hit
GACTCGTTAGCTCAGCCGGTAGAGCAACTG3772971.0116942108616493No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGC3462500.9284439592969096No Hit
GGCGGGGCGCGGGACATGTGGCGTA3326390.8919470618817753No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATTG2818410.7557359535948023No Hit
GGCTCTGTAGCTCAGTAGGTAGAGCAACG2615240.701257409418527No Hit
CGTTGAACCCCATTCGTGATGGGGATCGGGGATTG1516980.4067670519492349No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTC1492130.4001037068550752No Hit
CGTTGAACCCCATTCGTGATGGGGATCGGGGATT1242190.33308413048347385No Hit
GCGACCTCAGATCAGACGTGGCGACCCGCTG1183710.31740314774277106No Hit
CGGCGGGGCGCGGGACATGTGGCGTA1139790.3056263221276605No Hit
CTAAACCATTCGTAGACGACCTGCTT1013180.2716767799799113No Hit
AGTTGGTCCGAGTGTTGTGGGTTATTGTT907700.24339309223214578No Hit
GGTTCCATGGTGTAATGGTTAGCACTCTG891420.23902772973182704No Hit
CAACTTCTTAGAGGGACAAGTGGCGT883850.23699788979771075No Hit
CGACCTCAGATCAGACGTGGCGACCCGCTGA883230.23683164134868143No Hit
TCCCACATGGTCTAGCGGTTAGGATTCCT847060.22713292134643762No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGC833880.22359880109126554No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGC813480.21812869083288086No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATC798730.21417358660194094No Hit
CGGTCGGCGTCCAACTTCTTAGAGG768810.20615075822297677No Hit
GGTGCGCCGCGACCGGCTCCGGGACGGCTGGG759600.20368116432691194No Hit
GGGGGGCCCAAGTCCTTCTGATCGAGGC718710.19271681097076732No Hit
CCCCTTGTAAATTTAACTGTTAGTCCA704740.1889708580144127No Hit
CGCGACCTCAGATCAGACGT695100.18638596277466624No Hit
GGCTCGTTGGTCTAGGGGTATGATTCTC687230.18427568004263253No Hit
TGGGGGGCCCAAGTCCTTCTGATCGAGGC683270.18321383511012257No Hit
TCCCATATGGTCTAGCGGTTAGGATTCCT657040.17618045314554265No Hit
AGTTGGTCCGAGTGTTGTGGGTTATTGTTA656960.1761590017327647No Hit
AATGGTAGAACTTCAGCCTTCCAAGCTGA649880.17426055170191354No Hit
TCCCTGGTGGTCTAGTGGTTAGGATTCGG619830.16620286477718513No Hit
CGGTGGATCACTCGGCTCGTGCGTCGATG603900.16193135220777002No Hit
GTTTCCGTAGTGTAGTGGTTATCACGTTC591320.1585581175484328No Hit
GCAGGTGTAGTTTAATGGTAGAACT583750.15652827761431654No Hit
GCCGTCTTAGCTCAGCTGGCAGAGCAACTG557160.1493983642922357No Hit
ATTGATCATCGACACTTCGAACGCA553170.148328475079934No Hit
ATCGCATGATGAGTAATAGAAAGGAGCTT533420.1430326575503704No Hit
AAGTTTACCACCGAAGCTACGGATTGT529450.1419681311912632No Hit
CGGTGCGCCGCGACCGGCTCCGGGACGGCTGGG526550.14119051747806144No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCT488230.13091529075740943No Hit
CGACTCTTAGCGGTGGATCACTCGGCTC488030.13086166222546447No Hit
GGACGCTACGCCGCGACGAGTAGGAGGGC482380.12934665619801972No Hit
TGCTTAGTTGAACAGGGCCCTGAAGC480610.12887204369030691No Hit
TCCCTGGTGGTCTAGTGGTTAGGATTCGGC472140.12660087536243836No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCT472110.12659283108264663No Hit
GGCGGGGCGCGGGACATGTGGCGTAC458780.12301848942851586No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCTGAATT458300.122889780951848No Hit
GGCTGGTCCGATGGTAGTGGGTTATCAGAACT424980.11395526752981967No Hit
GCCGATTTAGCTCAGCGGTAGAGCAGCT420930.11286928975793448No Hit
TCCCTGGTGGTCTAGTGGTTAGGATTCGGCG410020.10994385334033759No Hit
CTGCAACACCCTGATCGTCGGTTCGAATCCG407740.10933248807616516No Hit
CGCGACCTCAGATCAGACGTGGCGGCCCGCTGA407340.10922523101227527No Hit
GGCTCTGTAGCTCAGTAGGTAGAGCAACGG393750.10558117226661606No Hit
TGAGAAGACGGTCGAACTTGACTATC382020.10243585886804488No Hit
TCCCTGGTGGTCTAGTGGTTAGGATTCG373830.10023977048489927No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)