FastQCFastQC Report
Sat 16 Sept 2023
SRR15480792_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR15480792_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences47931176
Total Bases1.5 Gbp
Sequences flagged as poor quality0
Sequence length10-42
%GC60

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGCGACCTCAGATCAGACGTGGCGACCCGCTGA1031228721.514779858520473No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATT648167413.522877051879552No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCTGAA46178189.634268101412742No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCTG16834163.5121525080043936No Hit
GCGACCTCAGATCAGACGTGGCGACCCGCTGA7148721.491455164797125No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCC6647541.386892739706616No Hit
GCCGATTTAGCTCAGCGGTAGAGCAGCTG6112231.2752096881578703No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCC5199801.0848471566814886No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATTG4829501.0075905502506344No Hit
CGTTGAACCCCATTCGTGATGGGGATCGGGGATT4260770.8889350013027012No Hit
GCGACCTCAGATCAGACGTGGCGACCCGCTGAA4036890.8422263622323808No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGC3958870.8259488563351753No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATC3796540.7920815462570748No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCTGAAT3298430.6881596228725955No Hit
GACTCGTTAGCTCAGCCGGTAGAGCAACTG2571640.5365276245256323No Hit
CGTTGAACCCCATTCGTGATGGGGATCGGGGATTG2544190.530800663017323No Hit
GGCTCTGTAGCTCAGTAGGTAGAGCAACG1649730.34418725716222776No Hit
GCGACCTCAGATCAGACGTGGCGACCCGCTG1547920.32294638462448744No Hit
CGNGACCTCAGATCAGACGTGGCGACCCGCTGA1322650.27594774641039477No Hit
GGCGGGGCGCGGGACATGTGGCGTA1321360.27567861051437587No Hit
GGTGCGCCGCGACCGGCTCCGGGACGGCTGGG1314080.2741597660779281No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTC1288300.26878122080710054No Hit
CGGTGCGCCGCGACCGGCTCCGGGACGGCTGGG1165490.24315906624114542No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCT1083190.22598861334009412No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGC1075090.22429869027206845No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCT1074100.22409214411930975No Hit
GCCGTCTTAGCTCAGCTGGCAGAGCAACTG1071830.22361854839530745No Hit
GGGGGGCCCAAGTCCTTCTGATCGAGGC1049460.21895143987287108No Hit
CTAAACCATTCGTAGACGACCTGCTT1027100.21428641767520998No Hit
AGTTGGTCCGAGTGTTGTGGGTTATTGTT1006680.21002614248396492No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGC967270.2018039365443485No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGAT936480.19538014256107547No Hit
TGGGGGGCCCAAGTCCTTCTGATCGAGGC936250.1953321570912427No Hit
GTNGAACCCCATTCGTGATGGGGATCGGGGATT854820.17834321444564596No Hit
GTTTCCGTAGTGTAGTGGTTATCACGTTC834950.17419768711704467No Hit
CAACTTCTTAGAGGGACAAGTGGCGT832430.17367193327365887No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCT829700.17310236660999095No Hit
ATCGCATGATGAGTAATAGAAAGGAGCTT822900.1716836657627595No Hit
CCCCTTGTAAATTTAACTGTTAGTCCA722950.15083084963323246No Hit
CGACCTCAGATCAGACGTGGCGACCCGCTGA699060.14584661974494428No Hit
GGTTCCATGGTGTAATGGTTAGCACTCTG691050.14417547359989666No Hit
TCCCACATGGTCTAGCGGTTAGGATTCCT681900.1422664864304602No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCTGG662380.13819398046899578No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCTA626370.1306811249529951No Hit
CGCGACCTCGGATCAGACGTGGCGACCCGCTGA621650.12969637965903444No Hit
AGTTGGTCCGAGTGTTGTGGGTTATTGTTA597410.12463912840360938No Hit
TGGGGGGCCCAAGTCCTTCTGATCGAGGCC550290.11480836606220551No Hit
CGGCGGGGCGCGGGACATGTGGCGTA541610.11299743615721007No Hit
TCCCTGGTGGTCTAGTGGTTAGGATTCGG532850.11116981565401192No Hit
CGCGACCTCAGATCAGGCGTGGCGACCCGCTGA518540.10818428490049985No Hit
TCCCATATGGTCTAGCGGTTAGGATTCCT480050.10015402084021473No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)