FastQCFastQC Report
Sat 16 Sept 2023
SRR15480793_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR15480793_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences33379427
Total Bases1 Gbp
Sequences flagged as poor quality0
Sequence length10-42
%GC60

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGCGACCTCAGATCAGACGTGGCGACCCGCTGA625330418.734006428570506No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATT481343014.420349396650817No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCTGAA26081517.813648209119947No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCTG9836252.946800135304899No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCC6682202.0018917640497547No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCC5746221.7214855126182964No Hit
GCGACCTCAGATCAGACGTGGCGACCCGCTGA4588201.374559245729413No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATTG4529181.356877695953259No Hit
GCCGATTTAGCTCAGCGGTAGAGCAGCTG4272491.279977034956292No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGC3664111.0977150686259534No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATC2651750.7944264591480255No Hit
CGTTGAACCCCATTCGTGATGGGGATCGGGGATT2476060.7417922422694674No Hit
GCGACCTCAGATCAGACGTGGCGACCCGCTGAA2462890.737846698207252No Hit
CGTTGAACCCCATTCGTGATGGGGATCGGGGATTG2191560.6565601021251803No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCTGAAT2183440.6541274659987423No Hit
GACTCGTTAGCTCAGCCGGTAGAGCAACTG1780490.5334093961529057No Hit
GGCGGGGCGCGGGACATGTGGCGTA1261470.3779184106425793No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCT1090130.32658739168889866No Hit
GGTGCGCCGCGACCGGCTCCGGGACGGCTGGG1061590.31803721495878284No Hit
GCGACCTCAGATCAGACGTGGCGACCCGCTG1056440.31649434845001984No Hit
GGCTCTGTAGCTCAGTAGGTAGAGCAACG1009040.3022939848548029No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCT912800.27346185421337516No Hit
CAACTTCTTAGAGGGACAAGTGGCGT906880.2716883066926224No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTC901770.2701574236130536No Hit
CGGTGCGCCGCGACCGGCTCCGGGACGGCTGGG842830.2524998406952882No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGC839000.25135242734993624No Hit
CGNGACCTCAGATCAGACGTGGCGACCCGCTGA807800.24200535257840106No Hit
CTAAACCATTCGTAGACGACCTGCTT761880.22824837586337238No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGAT725470.2173404594392828No Hit
CGACCTCAGATCAGACGTGGCGACCCGCTGA703930.2108873828181652No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGC703710.2108214739575967No Hit
TGGGGGGCCCAAGTCCTTCTGATCGAGGC696840.2087633199934798No Hit
CCCCTTGTAAATTTAACTGTTAGTCCA677710.2030322449813174No Hit
GGGGGGCCCAAGTCCTTCTGATCGAGGC660640.19791831657266015No Hit
GTNGAACCCCATTCGTGATGGGGATCGGGGATT644850.19318785789821977No Hit
AGTTGGTCCGAGTGTTGTGGGTTATTGTT629480.18858322523031928No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCT573050.17167760249449457No Hit
CGGCGGGGCGCGGGACATGTGGCGTA548280.16425686396593925No Hit
GCCGTCTTAGCTCAGCTGGCAGAGCAACTG540820.16202195442120682No Hit
GTTTCCGTAGTGTAGTGGTTATCACGTTC526330.1576809571955804No Hit
TCCCACATGGTCTAGCGGTTAGGATTCCT497630.14908284674868746No Hit
GGTTCCATGGTGTAATGGTTAGCACTCTG475740.14252491512211998No Hit
TGGGGGGCCCAAGTCCTTCTGATCGAGGCC451500.1352629570303888No Hit
TGGATGGTTTAGTGAGGCCCTCGGATCGGCC422360.12653302886235884No Hit
ATCGCATGATGAGTAATAGAAAGGAGCTT419870.12578706039501517No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCTGG410680.12303386753763029No Hit
TCCCTGGTGGTCTAGTGGTTAGGATTCGG388600.11641901462239003No Hit
CGCGACCTCGGATCAGACGTGGCGACCCGCTGA385230.11540941071277228No Hit
TATATGACTCCACGCTTCCAAGAAAAGCTT360010.10785385860578134No Hit
AGTTGGTCCGAGTGTTGTGGGTTATTGTTA353450.1058885762179201No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCTA350810.1050976698910979No Hit
GGCTGGTCCGATGGTAGTGGGTTATCAGAACT349950.10484002616342096No Hit
TCCCATATGGTCTAGCGGTTAGGATTCCT340610.10204189544655755No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCTGAATT335540.10052299579618308No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)