FastQCFastQC Report
Sat 16 Sept 2023
SRR15513161_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR15513161_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences90457571
Total Bases3.1 Gbp
Sequences flagged as poor quality0
Sequence length35-51
%GC67

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[FAIL]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGCCGAGGGCGCACCACCGGCCCGTCTCGCNNNNN62412726.899667911710784No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGCNNNN33155343.6652918747950904No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGNNNNN32696953.614617288363845No Hit
CACTCGCCGAATCCCGGGGCCGAGGGAGCGNNNNN22822152.5229673699728243No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN22803662.520923317739761No Hit
TGCGCCGCGACCGGCTCCGGGACGGCTGGGNNNNN14949601.652664319275166No Hit
AGTCCGCCCGGAGGATTCAACCCGGCGGCGGGNNN13777941.5231384004330604No Hit
GTGCGCCGCGACCGGCTCCGGGACGGCTGGGNNNN13693461.5137992153249396No Hit
CACTCGCCGAATCCCGGGGCCGAGGGAGCGANNNN13202591.459533995225231No Hit
AGATCGCAGCGAGGGAGCTGCTCTGCTACGTNNNN12775421.4123107506391035No Hit
CGCCGAGGGCGCACCACCGGCCCGTCTCGNNNNNN12011941.327908749616989No Hit
ACCGCCTGGGAATACCGGGTGCTGTAGGCTTNNNN10849871.1994429963192357No Hit
GGTGCGCCGCGACCGGCTCCGGGACGGCTGGGNNN8025820.8872469060660495No Hit
CACTCGCCGAATCCCGGGGCCGAGGGAGCNNNNNN5751880.6358649625911357No Hit
CGACTGCATAATTTGTGGTAGTGGGGNNNNNNNNN4817520.5325723371457763No Hit
ACTCGCCGAATCCCGGGGCCGAGGGAGCGNNNNNN4775660.5279447532368517No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATTNN4646110.5136231217174735No Hit
CGGTGCGCCGCGACCGGCTCCGGGACGGCTGGGNN4570250.5052368695595418No Hit
TCGACTGCATAATTTGTGGTAGTGGGGNNNNNNNN4467660.49389564086349386No Hit
CTGGTCCGATGGTAGTGGGTTATCAGAANNNNNNN3849300.4255365203206706No Hit
ACTCGCCGAATCCCGGGGCCGAGGGAGCGANNNNN3794170.4194419503039718No Hit
AGGCGCCGGCCGAGGCGAGGCGCCGCGCGGAACNN3374510.3730489292046102No Hit
TGCGCCGCGACCGGCTCCGGGACGGCTGGGANNNN3289730.363676579376645No Hit
GCGCCGCGACCGGCTCCGGGACGGCTGGGANNNNN2745170.30347597991548986No Hit
CGACTGCATAATTTGTGGTAGTGGGGGNNNNNNNN2688270.29718573805171045No Hit
AAACCCTTGTGTCGAGGGCTGACTTTCAATNNNNN2663530.2944507541552271No Hit
CGCCGCGACCGGCTCCGGGACGGCTGGGAAGNNNN2623080.2899790444295702No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCCNNNN2581760.2854111570163652No Hit
GAATACAAGCTTGGGCTGCAGGTCGACNNNNNNNN2401870.26552448550713353No Hit
GCCGAGGGCGCACCACCGGCCCGTCTCGCNNNNNN2294710.2536780475787925No Hit
CTAAACCATTCGTAGACGACCTGCTTNNNNNNNNN2049560.22657694401279027No Hit
AAACCTGCATTAAAAATTTCGGTTGGGNNNNNNNN1932920.21368250093737315No Hit
CACTCGCCGAATCCCGGGGCCGAGGGAGCGAGNNN1833590.20270166219696523No Hit
TCGACTGCATAATTTGTGGTAGTGGGGGNNNNNNN1822920.2015221036611739No Hit
TCCCGGGGCTACGCCTGTCTGAGCGTCGCTNNNNN1802590.1992746411464No Hit
GCGCCGCGACCGGCTCCGGGACGGCTGGGNNNNNN1798290.1987992801619668No Hit
GAGGGCGCACCACCGGCCCGTCTCGCNNNNNNNNN1794600.19839135410788336No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCTNNNN1793370.1982553787565222No Hit
AGCACTCGCCGAATCCCGGGGCCGAGGGAGNNNNN1775410.1962699175285173No Hit
GGTGCGCCGCGACCGGCTCCGGGACGGCTGGNNNN1727990.19102768081181398No Hit
GCACTCGCCGAATCCCGGGGCCGAGGGAGCGANNN1716790.1897895312709646No Hit
CGGTGCGCCGCGACCGGCTCCGGGACGGCTGGNNN1572130.1737975033621011No Hit
GACTGCATAATTTGTGGTAGTGGGGNNNNNNNNNN1473770.16292389721585604No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCNNN1437590.15892423200264796No Hit
AAACGATGCCGACCGGCGATGCGGCGGCGNNNNNN1435820.1587285601555673No Hit
CAGTCCGCCCGGAGGATTCAACCCGGCGGCGGGNN1420270.15700952217697733No Hit
ATGGCCTCAGTTCCGAAAACCAACAAAATNNNNNN1418970.15686580839098588No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCNNNNN1414020.1563185905135569No Hit
CTCGACTGCATAATTTGTGGTAGTGGGGNNNNNNN1406880.15552927018126542No Hit
ATAAACGATGCCGACCGGCGATGCGGCGGCGNNNN1406600.1554983164427442No Hit
GCACTCGCCGAATCCCGGGGCCGAGGGAGCGNNNN1395570.15427896024313986No Hit
CCGCCTGGGAATACCGGGTGCTGTAGGCTTNNNNN1391970.15388098360500968No Hit
AGCACTCGCCGAATCCCGGGGCCGAGGGAGCNNNN1350090.1492511887147622No Hit
GCGCCGCGACCGGCTCCGGGACGGCTGGGAAGNNN1333310.14739617538481106No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCNNNNNN1306710.1444555702252938No Hit
GCACTCGCCGAATCCCGGGGCCGAGGGAGNNNNNN1290600.14267462476966133No Hit
GTGCGCCGCGACCGGCTCCGGGACGGCTGGGANNN1289240.14252427803970105No Hit
AATCATGGCCTCAGTTCCGAAAACCAACNNNNNNN1275930.14105286996928096No Hit
GTCCGCCCGGAGGATTCAACCCGGCGGCGGGNNNN1274430.14088704637006005No Hit
ACTCGCCGAATCCCGGGGCCGAGGGAGCNNNNNNN1266940.14005903386461704No Hit
GACCGCCTGGGAATACCGGGTGCTGTAGGCTTNNN1240090.13709079143856295No Hit
CACTCGCCGAATCCCGGGGCCGAGGGAGNNNNNNN1223210.1352247232019971No Hit
ACGCTGAGCCAGTCAGTGTAGCGCGCGTGCNNNNN1220410.13491518581678477No Hit
AGCACTCGCCGAATCCCGGGGCCGAGGGAGCGNNN1199890.13264671897944286No Hit
TCCGCCGAGGGCGCACCACCGGCCCGTCTCGNNNN1186810.13120073719423664No Hit
CGAGGGCGCACCACCGGCCCGTCTCGNNNNNNNNN1172550.12962430751097662No Hit
CAGTGCGCCCCGGGCGGGTCGCGCCGTCGGGCNNN1163040.1285729858919161No Hit
AGCACTCGCCGAATCCCGGGGCCGAGGGANNNNNN1135770.12555831285808017No Hit
GTGGGGGGGCCGGGCCACCCCTCCCACGGCGNNNN1133380.1252941005899882No Hit
GCACTCGCCGAATCCCGGGGCCGAGGGAGCNNNNN1098090.12139282404565119No Hit
CAGTGCGCCCCGGGCGGGTCGCGCCGTCGGGNNNN1079300.11931560709274407No Hit
CGCCGAGGGCGCACCACCGGCCCGTCTCNNNNNNN1076950.11905581678729799No Hit
AGTCCGCCGAGGGCGCACCACCGGCCCGTCTCGNN1070720.11836709610520053No Hit
GTGGGGGGGCCGGGCCACCCCTCCCACGGCGCNNN1045570.1155867870915968No Hit
GAATACAAGCTTGGGCTGCAGGTCGACCCGNNNNN1029890.11385337773440767No Hit
ACTCGCCGAATCCCGGGGCCGAGGGAGNNNNNNNN1020330.1127965286620398No Hit
TGCGCCGCGACCGGCTCCGGGACGGCTGGGAAGNN1018880.11263623251612626No Hit
ACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCNNN994600.10995210119007065No Hit
TAAACGATGCCGACCGGCGATGCGGCGGCGNNNNN987320.10914730398851856No Hit
AGGCGTAGCCCCGGGAGGAACCCGGGGCCGCNNNN985920.10899253529591238No Hit
AGCACTCGCCGAATCCCGGGGCCGAGGGNNNNNNN976230.10792131484494538No Hit
CGAGGGCGCACCACCGGCCCGTCTCGCNNNNNNNN943760.10433178666714364No Hit
AAACGATGCCGACCGGCGATGCGGCGGCGTTNNNN936640.10354467731617512No Hit
GTGCGCCGCGACCGGCTCCGGGACGGCTGGNNNNN925440.10230652777532573No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)