FastQCFastQC Report
Sat 16 Sept 2023
SRR15513165.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR15513165.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences35646230
Total Bases1 Gbp
Sequences flagged as poor quality0
Sequence length1-51
%GC68

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGCCGAGGGCGCACCACCGGCCCGTCTCGC18626875.225481067703373No Hit
CGCCGCGACCGGCTCCGGGACGGCTGGG11813153.3139970201617395No Hit
CACTCGCCGAATCCCGGGGCCGAGGGAG11503303.2270733819537156No Hit
TGCGCCGCGACCGGCTCCGGGACGGCTGGG7912252.2196596947278855No Hit
CGCCGAGGGCGCACCACCGGCCCGTCTCG7757912.176361988350521No Hit
CACTCGCCGAATCCCGGGGCCGAGGGAGCG7663122.1497701159421347No Hit
GCGCCGCGACCGGCTCCGGGACGGCTGGG7653212.1469900182992703No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATT6838641.9184749691622367No Hit
CACTCGCCGAATCCCGGGGCCGAGGGAGCGA4825571.3537392313296526No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCG4783121.3418305386011367No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGC4458101.2506511908832996No Hit
GTGCGCCGCGACCGGCTCCGGGACGGCTGGG4297721.2056590556701228No Hit
AACGATGCCGACCGGCGATGCGGCGGCG3922221.1003183225827808No Hit
TGGTTGATGCCATGCTTCCAAGAAAAG3830571.0746073287413564No Hit
CGCCGAGGGCGCACCACCGGCCCGTCTC3728141.0458721721764124No Hit
CACTCGCCGAATCCCGGGGCCGAGGGA3699441.0378208298605491No Hit
CACTCGCCGAATCCCGGGGCCGAGGG3697371.0372401232893351No Hit
ACTCGCCGAATCCCGGGGCCGAGGGAG3406270.9555765083712919No Hit
CACTCGCCGAATCCCGGGGCCGAGGGAGC3082490.8647450235270322No Hit
GAGGGCGCACCACCGGCCCGTCTCGC2995680.8403918170308613No Hit
GTCCGCCCGGAGGATTCAACCCGGCGGCGG2653760.7444714349876551No Hit
AGTCCGCCCGGAGGATTCAACCCGGCGGCGGG2581040.7240709606597948No Hit
TTGAACCCCATTCGTGATGGGGATCGGGGATT2064380.5791299668997254No Hit
GGTGCGCCGCGACCGGCTCCGGGACGGCTGGG2015690.5654707384203042No Hit
AGTCCGCCCGGAGGATTCAACCCGGCGGCGG1761930.4942822845501474No Hit
GTCCGCCCGGAGGATTCAACCCGGCGGCGGG1588670.44567686400497336No Hit
CGGTGCGCCGCGACCGGCTCCGGGACGGCTGGG1572790.44122197494657917No Hit
GCCGCGACCGGCTCCGGGACGGCTGGG1544610.43331651060995785No Hit
GTGGGGGGGCCGGGCCACCCCTCCCACGGCG1336670.374982150987636No Hit
TGGTTGATGCCATGCTTCCAAGAAAAGC1314740.3688300277476748No Hit
ACTCGCCGAATCCCGGGGCCGAGGGAGCG1232540.34577008564440054No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATTG1160080.3254425503061614No Hit
GCCGAGGGCGCACCACCGGCCCGTCTCGC1133280.31792422368368267No Hit
AAACGATGCCGACCGGCGATGCGGCGGCG1113900.31248746361115887No Hit
ACGATGCCGACCGGCGATGCGGCGGCG1088900.30547409922451824No Hit
CGCCGCGACCGGCTCCGGGACGGCTGGGA1052500.2952626406775695No Hit
ATTGATCATCGACACTTCGAACG962400.2699864754281168No Hit
CGTTGAACCCCATTCGTGATGGGGATCGGGGATTG920810.2583190424345015No Hit
TGGTTGATGCCATGCTTCCAAGAAAA887520.24898004641725086No Hit
CGGTGCGCCGCGACCGGCTCCGGGACGGCTGG881350.24724914808662793No Hit
ACTCGCCGAATCCCGGGGCCGAGGGA863820.24233137697871557No Hit
CGCCGAGGGCGCACCACCGGCCCGTCT807550.22654569641726488No Hit
GGTGCGCCGCGACCGGCTCCGGGACGGCTGG781530.21924618676364932No Hit
ACTCGCCGAATCCCGGGGCCGAGGGAGCGA778470.21838775096272453No Hit
GTGCGCCGCGACCGGCTCCGGGACGGCTGG762560.21392444586706647No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTC714280.20038023656358614No Hit
GGGAGAGCGACGCTCAGACAGG657950.1845777239276075No Hit
CGTTGAACCCCATTCGTGATGGGGATCGGGGATT644720.1808662514941973No Hit
CGAGGGCGCACCACCGGCCCGTCTCGC635450.17826569597963093No Hit
CACTCGCCGAATCCCGGGGCCGAGGGAGCGAG633220.1776401038763426No Hit
ACCGCCTGGGAATACCGGGTGCTGTAGGCTT627310.17598214453534075No Hit
CTCTAGCATCACCAGTATTAGAGG617860.1733310927971906No Hit
ACTCGCCGAATCCCGGGGCCGAGGGAGC612390.17179656866939363No Hit
GCCGAGGGCGCACCACCGGCCCGTCTCG591770.16601194572329248No Hit
TGCGCCGCGACCGGCTCCGGGACGGCTGG541340.15186458708256106No Hit
TAAACGATGCCGACCGGCGATGCGGCGGCG525960.14754996531189973No Hit
GCGCCGCGACCGGCTCCGGGACGGCTGGGA515460.14460435226951068No Hit
GGGAGAGCGACGCTCAGACAGGC503420.14122671598090458No Hit
CGCCGCGACCGGCTCCGGGACGGCTGGGAAG470080.13187369323488066No Hit
TGGGGGGGCCGGGCCACCCCTCCCACGGCG451160.12656597906707104No Hit
TTGATCATCGACACTTCGAACG447350.125497142334547No Hit
CGATGTCAACTAGCCGTTGGGAGC434340.12184738750773925No Hit
TGCGCCGCGACCGGCTCCGGGACGGCTGGGA422360.11848658329366107No Hit
GCGCCGCGACCGGCTCCGGGACGGCTGG415880.11666871924464381No Hit
GGCGGTGCGCCGCGACCGGCTCCGGGACGGCTGGG405190.11366980463291629No Hit
AACGATGCCGACCGGCGATGCGGCGGC403470.11318728516311542No Hit
TGAACCCCATTCGTGATGGGGATCGGGGATT395170.11085884818675075No Hit
AAACCTGCATTAAAAATTTCGGTTGGG382000.10716420782786848No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)