FastQCFastQC Report
Sat 16 Sept 2023
SRR15513166.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR15513166.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences39858811
Total Bases1.1 Gbp
Sequences flagged as poor quality0
Sequence length1-51
%GC72

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GAGGGCGCACCACCGGCCCGTCTCGC23929406.003540848220485No Hit
CGCCGCGACCGGCTCCGGGACGGCTGGG22869905.7377276005548685No Hit
CACTCGCCGAATCCCGGGGCCGAGGGAG14918213.742763425632541No Hit
CACTCGCCGAATCCCGGGGCCGAGGG12294563.084527533949771No Hit
CACTCGCCGAATCCCGGGGCCGAGGGAGCG11737312.944721557298837No Hit
GCGCCGCGACCGGCTCCGGGACGGCTGGG11351092.847824537465505No Hit
TGCGCCGCGACCGGCTCCGGGACGGCTGGG10516552.6384505047077296No Hit
CGCCGAGGGCGCACCACCGGCCCGTCTCGC9764262.4497118090150756No Hit
CGCCGAGGGCGCACCACCGGCCCGTCTCG7782911.9526197106080259No Hit
ACTCGCCGAATCCCGGGGCCGAGGGAG6569301.6481424897496315No Hit
CACTCGCCGAATCCCGGGGCCGAGGGAGCGA6499511.630633186725013No Hit
GTGCGCCGCGACCGGCTCCGGGACGGCTGGG5477901.374325992814989No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATT4946691.2410530760689273No Hit
CACTCGCCGAATCCCGGGGCCGAGGGA4276701.072962261719247No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCG4081991.024112334911345No Hit
GCCGCGACCGGCTCCGGGACGGCTGGG3783670.9492681555403145No Hit
CACTCGCCGAATCCCGGGGCCGAGGGAGC3701620.928682995586597No Hit
GGTGCGCCGCGACCGGCTCCGGGACGGCTGGG2673110.6706446913331158No Hit
ACTCGCCGAATCCCGGGGCCGAGGGAGCG2593080.6505663202045842No Hit
AACGATGCCGACCGGCGATGCGGCGGCG2543750.6381901356766513No Hit
ACTCGCCGAATCCCGGGGCCGAGGGA2415730.6060717666665972No Hit
CGCGACCGGCTCCGGGACGGCTGGG2308560.5791843615204678No Hit
CGCCGAGGGCGCACCACCGGCCCGTCTC2099190.5266564524466121No Hit
AGGGCGCACCACCGGCCCGTCTCGC1957420.4910884070274952No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGC1905030.4779445126950726No Hit
CGGTGCGCCGCGACCGGCTCCGGGACGGCTGGG1786430.448189485632173No Hit
GTCCGCCCGGAGGATTCAACCCGGCGGCGG1749440.438909228877901No Hit
ACTCGCCGAATCCCGGGGCCGAGGGAGCGA1548630.3885289001721602No Hit
TCGCTTCTGGCGCCAAGCGCCCGG1358760.3408932594602483No Hit
ACTCGCCGAATCCCGGGGCCGAGGG1285410.3224908038526287No Hit
AGTCCGCCCGGAGGATTCAACCCGGCGGCGGG1263040.31687849394202955No Hit
TTGAACCCCATTCGTGATGGGGATCGGGGATT1246730.3127865505069883No Hit
CCGCGACCGGCTCCGGGACGGCTGGG1159250.29083908197863706No Hit
ACTCGCCGAATCCCGGGGCCGAGGGAGC1153910.2894993531041355No Hit
CACTCGCCGAATCCCGGGGCCGAGG1148090.288039199162263No Hit
GTCCGCCCGGAGGATTCAACCCGGCGGCGGG1059930.2659211284551363No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCC1043600.2618241673089546No Hit
GTGCGCCGCGACCGGCTCCGGGACGGCTGG1007320.2527220393001688No Hit
CGGTGCGCCGCGACCGGCTCCGGGACGGCTGG992300.2489537382336869No Hit
CGCCGCGACCGGCTCCGGGACGGCTGGGA980240.24592805841599238No Hit
ACGATGCCGACCGGCGATGCGGCGGCG967740.2427919889532079No Hit
GTGGGGGGGCCGGGCCACCCCTCCCACGGCG942400.23643454893825105No Hit
GGTGCGCCGCGACCGGCTCCGGGACGGCTGG942160.23637433640456562No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGC905100.22707651766130205No Hit
AAACGATGCCGACCGGCGATGCGGCGGCG884590.2219308548867652No Hit
AGTCCGCCCGGAGGATTCAACCCGGCGGCGG862440.216373739798711No Hit
GCGCCGCGACCGGCTCCGGGACGGCTGG835940.2097252725376078No Hit
TGCGCCGCGACCGGCTCCGGGACGGCTGG822260.20629315811753643No Hit
GAGGGCGCACCACCGGCCCGTCTCG764170.19171921611008416No Hit
CGAGGGCGCACCACCGGCCCGTCTCG750810.18836738506826006No Hit
AGGCGTAGCCCCGGGAGGAACCCGGGGCCGC740910.1858836180537347No Hit
CTAAACCATTCGTAGACGACCTGCTT728300.18271995117967768No Hit
CACTCGCCGAATCCCGGGGCCGAGGGAGCGAG705520.17700477819069918No Hit
CTCCATCTAAGGCTAAATACCG692850.17382605818322078No Hit
GCCGAGGGCGCACCACCGGCCCGTCTCGC690840.173321778213605No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATTG687350.17244618761959557No Hit
AACGATGCCGACCGGCGATGCGGCGGC643550.16145740022199861No Hit
GCCGAGGGCGCACCACCGGCCCGTCTCG599440.15039083830172456No Hit
CGTTGAACCCCATTCGTGATGGGGATCGGGGATT596580.14967330560863945No Hit
CGCCGCGACCGGCTCCGGGACGGCTGG581560.14590500454215757No Hit
TAAACGATGCCGACCGGCGATGCGGCGGCG570770.14319794938188196No Hit
GCGACCGGCTCCGGGACGGCTGGG566600.14215175660909704No Hit
GCGCCGCGACCGGCTCCGGGACGGCTGGGA547440.13734478933654093No Hit
CGTTGAACCCCATTCGTGATGGGGATCGGGGATTG541710.1359072150948005No Hit
CGAGGGCGCACCACCGGCCCGTCTCGC531260.13328546102391262No Hit
CTCGCTTCTGGCGCCAAGCGCCCGG527290.13228944536253226No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCC519970.13045296308512563No Hit
CGACCGGCTCCGGGACGGCTGGG493040.12369661503450265No Hit
GGGAGAGCGACGCTCAGACAGG441080.11066060149159994No Hit
ACCGCCTGGGAATACCGGGTGCTGTAGGCTT434750.10907249591564586No Hit
ACCGGGGCCCGCGCGGCCAACCCCCGGGACGGGGAC417060.1046343304119132No Hit
ACGATGCCGACCGGCGATGCGGCGGC400240.10041443534279032No Hit
CGCCGAGGGCGCACCACCGGCCCGTCT398600.10000298302927299No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)