FastQCFastQC Report
Sat 16 Sept 2023
SRR15513167.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR15513167.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences49294514
Total Bases1.3 Gbp
Sequences flagged as poor quality0
Sequence length1-51
%GC66

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGCCGCGACCGGCTCCGGGACGGCTGGG20892894.238380360135005No Hit
GAGGGCGCACCACCGGCCCGTCTCGC18601033.7734482989324127No Hit
CACTCGCCGAATCCCGGGGCCGAGGG13590992.757099907709811No Hit
CACTCGCCGAATCCCGGGGCCGAGGGAG11890762.412187287210094No Hit
CGCCGAGGGCGCACCACCGGCCCGTCTCGC11739492.381500302447449No Hit
TGCGCCGCGACCGGCTCCGGGACGGCTGGG10381642.1060436867274928No Hit
GCGCCGCGACCGGCTCCGGGACGGCTGGG9875912.0034501202304176No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATT9260331.8785721267076494No Hit
CGCCGAGGGCGCACCACCGGCCCGTCTCG9216711.8697232718431913No Hit
CACTCGCCGAATCCCGGGGCCGAGGGAGCG6158351.249297234170926No Hit
GTGCGCCGCGACCGGCTCCGGGACGGCTGGG5139311.0425724047101874No Hit
AACGATGCCGACCGGCGATGCGGCGGCG4885760.9911366607651309No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCG4433680.8994266583092795No Hit
CACTCGCCGAATCCCGGGGCCGAGGGA4012180.8139201859257604No Hit
ACTCGCCGAATCCCGGGGCCGAGGGAG3877370.7865723151261822No Hit
CACTCGCCGAATCCCGGGGCCGAGGGAGCGA3800990.7710776903084996No Hit
GCCGCGACCGGCTCCGGGACGGCTGGG3148510.6387140767834733No Hit
CACTCGCCGAATCCCGGGGCCGAGGGAGC2841950.5765246006888312No Hit
CGCCGAGGGCGCACCACCGGCCCGTCTC2365050.47977955518539045No Hit
GTCCGCCCGGAGGATTCAACCCGGCGGCGG2311070.4688290465750408No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGC2301620.46691199755007223No Hit
AGTCCGCCCGGAGGATTCAACCCGGCGGCGGG2178860.44200861783524226No Hit
GGTGCGCCGCGACCGGCTCCGGGACGGCTGGG2153540.43687214362231064No Hit
ATTGATCATCGACACTTCGAACG1934440.39242500696933535No Hit
TTGAACCCCATTCGTGATGGGGATCGGGGATT1778430.3607764547592456No Hit
ACTCGCCGAATCCCGGGGCCGAGGGA1749870.3549827065948961No Hit
AGGGCGCACCACCGGCCCGTCTCGC1736880.35234752491930443No Hit
GGGAGAGCGACGCTCAGACAGG1705970.3460770502778463No Hit
ACGATGCCGACCGGCGATGCGGCGGCG1649430.33460721410094435No Hit
AAACGATGCCGACCGGCGATGCGGCGGCG1629410.33054591024064056No Hit
GTCCGCCCGGAGGATTCAACCCGGCGGCGGG1605040.3256021552418592No Hit
CTCCATCTAAGGCTAAATACCG1476470.2995201453857523No Hit
CTCTAGCATCACCAGTATTAGAGG1459690.2961161154768663No Hit
CGGTGCGCCGCGACCGGCTCCGGGACGGCTGGG1454180.29499834403479464No Hit
TCGCTTCTGGCGCCAAGCGCCCGG1420180.28810102479152144No Hit
TTGATCATCGACACTTCGAACG1393040.2825953411367439No Hit
CGTTGAACCCCATTCGTGATGGGGATCGGGGATT1292450.2621894192931895No Hit
AGTCCGCCCGGAGGATTCAACCCGGCGGCGG1269660.25756618677688964No Hit
CGCGACCGGCTCCGGGACGGCTGGG1251260.25383351989229475No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATTG1128240.2288773959714868No Hit
ACTCGCCGAATCCCGGGGCCGAGGGAGCG1041670.21131560400412916No Hit
ACTCGCCGAATCCCGGGGCCGAGGG1006850.20425193764969465No Hit
CGCCGCGACCGGCTCCGGGACGGCTGGGA1003810.20363523616441373No Hit
AACGATGCCGACCGGCGATGCGGCGGC988640.2005578146079298No Hit
CGTTGAACCCCATTCGTGATGGGGATCGGGGATTG981150.19903837575110284No Hit
CGAGGGCGCACCACCGGCCCGTCTCG967250.19621858935458822No Hit
AAACCTGCATTAAAAATTTCGGTTGGG912990.18521127929164694No Hit
GTGCGCCGCGACCGGCTCCGGGACGGCTGG901350.18284996176247928No Hit
GAGGGCGCACCACCGGCCCGTCTCG818260.16599413070590371No Hit
TAAACGATGCCGACCGGCGATGCGGCGGCG815130.1653591716108612No Hit
CACTCGCCGAATCCCGGGGCCGAGG800210.16233246563704837No Hit
GTGGGGGGGCCGGGCCACCCCTCCCACGGCG796820.1616447623360279No Hit
CCGCGACCGGCTCCGGGACGGCTGGG778910.1580114979934684No Hit
CGGTGCGCCGCGACCGGCTCCGGGACGGCTGG772230.15665637762449588No Hit
GCCGAGGGCGCACCACCGGCCCGTCTCGC744930.1511182359968089No Hit
GGTGCGCCGCGACCGGCTCCGGGACGGCTGG735610.14922755907482932No Hit
TGCGCCGCGACCGGCTCCGGGACGGCTGG729680.14802458545387018No Hit
GGGAGAGCGACGCTCAGACAGGC706760.1433749808345813No Hit
GCGCCGCGACCGGCTCCGGGACGGCTGG700710.14214766373394006No Hit
TCTAGCATCACCAGTATTAGAGG679320.13780843848059848No Hit
ACTCGCCGAATCCCGGGGCCGAGGGAGCGA655670.13301074435990992No Hit
CGAGGGCGCACCACCGGCCCGTCTCGC648450.13154607833236776No Hit
GCCGAGGGCGCACCACCGGCCCGTCTCG631260.12805887486790113No Hit
ACTCGCCGAATCCCGGGGCCGAGGGAGC602940.12231381366291591No Hit
CTCGCTTCTGGCGCCAAGCGCCCGG598290.12137050382523297No Hit
ATTGATCATCGACACTTCGAACGCA566880.11499859801843264No Hit
TTGATCATCGACACTTCGAACGCA556070.11280565622373312No Hit
ACGATGCCGACCGGCGATGCGGCGGC537500.10903850274292186No Hit
GCGCCGCGACCGGCTCCGGGACGGCTGGGA535770.10868755091083768No Hit
AGGCGTAGCCCCGGGAGGAACCCGGGGCCGC533630.10825342552317281No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)