FastQCFastQC Report
Sat 16 Sept 2023
SRR15513168.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR15513168.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences38535406
Total Bases1 Gbp
Sequences flagged as poor quality0
Sequence length1-51
%GC72

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGCCGCGACCGGCTCCGGGACGGCTGGG24873316.454664056218845No Hit
GAGGGCGCACCACCGGCCCGTCTCGC16816324.363862158348611No Hit
CGCCGAGGGCGCACCACCGGCCCGTCTCGC16195484.202753177169069No Hit
CACTCGCCGAATCCCGGGGCCGAGGGAG10217232.6513876615183447No Hit
CACTCGCCGAATCCCGGGGCCGAGGG9688532.5141891589256904No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATT8506002.2073207169531313No Hit
TGCGCCGCGACCGGCTCCGGGACGGCTGGG8397412.179141436838631No Hit
GCGCCGCGACCGGCTCCGGGACGGCTGGG8294012.1523089700936326No Hit
CGCCGAGGGCGCACCACCGGCCCGTCTCG6904911.7918352800019806No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCG6480631.6817339357991974No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGC6353921.6488524864640066No Hit
CACTCGCCGAATCCCGGGGCCGAGGGAGCG5439271.4114993364803268No Hit
GTGCGCCGCGACCGGCTCCGGGACGGCTGGG5017691.3020986466316198No Hit
CACTCGCCGAATCCCGGGGCCGAGGGAGCGA3886211.0084777619833563No Hit
GGTGCGCCGCGACCGGCTCCGGGACGGCTGGG3882691.0075643163069308No Hit
AACGATGCCGACCGGCGATGCGGCGGCG3631320.9423333959424225No Hit
ACTCGCCGAATCCCGGGGCCGAGGGAG3552380.9218483386421308No Hit
CACTCGCCGAATCCCGGGGCCGAGGGA3254420.844527238145616No Hit
AGTCCGCCCGGAGGATTCAACCCGGCGGCGGG2917010.7569687990312078No Hit
GCCGCGACCGGCTCCGGGACGGCTGGG2914630.7563511851931701No Hit
CACTCGCCGAATCCCGGGGCCGAGGGAGC2818360.7313689649461589No Hit
CGGTGCGCCGCGACCGGCTCCGGGACGGCTGGG2634840.6837452289979766No Hit
CGCCGAGGGCGCACCACCGGCCCGTCTC2345550.6086740074828847No Hit
TTGAACCCCATTCGTGATGGGGATCGGGGATT2114210.5486409044191723No Hit
GTCCGCCCGGAGGATTCAACCCGGCGGCGG1904290.49416632589779896No Hit
ACTCGCCGAATCCCGGGGCCGAGGGA1875770.48676533990585175No Hit
GTGGGGGGGCCGGGCCACCCCTCCCACGGCG1813790.47068142995561013No Hit
GTCCGCCCGGAGGATTCAACCCGGCGGCGGG1503200.39008282409169376No Hit
CGCGACCGGCTCCGGGACGGCTGGG1499780.3891953285765304No Hit
AGTCCGCCCGGAGGATTCAACCCGGCGGCGG1472040.3819967538424274No Hit
TCGCTTCTGGCGCCAAGCGCCCGG1452990.3770532481219998No Hit
GGGAGAGCGACGCTCAGACAGG1400600.36345795863679237No Hit
AGGGCGCACCACCGGCCCGTCTCGC1383190.35894003556106296No Hit
CTCCATCTAAGGCTAAATACCG1333270.3459857150590291No Hit
ACTCGCCGAATCCCGGGGCCGAGGG1241600.3221972022300738No Hit
CGGTGCGCCGCGACCGGCTCCGGGACGGCTGG1194310.3099253709692328No Hit
GGTGCGCCGCGACCGGCTCCGGGACGGCTGG1182140.30676723634363684No Hit
CACTCGCCGAATCCCGGGGCCGAGG1170080.3036376468954291No Hit
ACGATGCCGACCGGCGATGCGGCGGCG1134060.29429039880882535No Hit
CGCCGCGACCGGCTCCGGGACGGCTGGGA1112060.28858136333116613No Hit
CGCCGCGACCGGCTCCGGGACGGCTGG1076360.27931715576060107No Hit
GAGGGCGCACCACCGGCCCGTCTCG1024690.2659087074364806No Hit
CGAGGGCGCACCACCGGCCCGTCTCG1019030.2644399283090465No Hit
CCGCGACCGGCTCCGGGACGGCTGGG1004730.26072905524856804No Hit
CGTTGAACCCCATTCGTGATGGGGATCGGGGATT998580.25913312033094965No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATTG991770.2573659143490015No Hit
AAACGATGCCGACCGGCGATGCGGCGGCG982730.2550200197709089No Hit
GCCGAGGGCGCACCACCGGCCCGTCTCGC946600.24564422650691675No Hit
CACTCGCCGAATCCCGGGGCCGAGGGAGCGAG933580.24226551551059303No Hit
ACTCGCCGAATCCCGGGGCCGAGGGAGCG909050.23589994095300307No Hit
CGCTTCTGGCGCCAAGCGCCCGGC831320.2157288806039827No Hit
GTGCGCCGCGACCGGCTCCGGGACGGCTGG815940.2117377458018737No Hit
CGCTTCTGGCGCCAAGCGCCCGG779740.20234378742499817No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTC765750.1987133598644322No Hit
CGAGGGCGCACCACCGGCCCGTCTCGC742300.19262804704847278No Hit
ACTCGCCGAATCCCGGGGCCGAGGGAGCGA686570.17816602217711164No Hit
GACCGGCTCCGGGACGGCTGGG686000.17801810625791772No Hit
CGTTGAACCCCATTCGTGATGGGGATCGGGGATTG683810.177449797726278No Hit
GGGAGAGCGACGCTCAGACAGGC661160.17157208620041528No Hit
GGCGGTGCGCCGCGACCGGCTCCGGGACGGCTGGG661040.17154094600690076No Hit
GCGCCGCGACCGGCTCCGGGACGGCTGG650650.1688447242517699No Hit
TGCGCCGCGACCGGCTCCGGGACGGCTGG640020.16608622210961005No Hit
ACTCGCCGAATCCCGGGGCCGAGGGAGC622910.16164614951766695No Hit
TCGCCGAATCCCGGGGCCGAGGG575570.1493613431761949No Hit
CGACCGGCTCCGGGACGGCTGGG565030.14662619617917091No Hit
GCGACCGGCTCCGGGACGGCTGGG553460.14362376252114742No Hit
CGGCGGTGCGCCGCGACCGGCTCCGGGACGGCTGGG547580.14209789303893672No Hit
CGGCGGTGCGCCGCGACCGGCTCCGGGACGGCTGG539170.1399154844767952No Hit
TGGGGGGGCCGGGCCACCCCTCCCACGGCG510560.13249114333971204No Hit
GCCGAGGGCGCACCACCGGCCCGTCTCG496040.128723179924457No Hit
CGCCGAGGGCGCACCACCGGCCCGTCT486380.1262163943465394No Hit
TAAACGATGCCGACCGGCGATGCGGCGGCG476770.12372258384925282No Hit
GCACCACCGGCCCGTCTCGC451470.11715719304994476No Hit
AACGATGCCGACCGGCGATGCGGCGGC436160.11318422336071923No Hit
GCGCCGCGACCGGCTCCGGGACGGCTGGGA421400.10935397955843518No Hit
CTCGCTTCTGGCGCCAAGCGCCCGG406680.10553411582065594No Hit
ATTGATCATCGACACTTCGAACG396860.10298580998471898No Hit
AGGGCACCACCAGGAGTGGAGCCTGCGG394270.10231370080803093No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)