FastQCFastQC Report
Sat 16 Sept 2023
SRR15513169.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR15513169.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences42994419
Total Bases1.2 Gbp
Sequences flagged as poor quality0
Sequence length1-51
%GC67

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GAGGGCGCACCACCGGCCCGTCTCGC25786045.997531912223305No Hit
CGCCGCGACCGGCTCCGGGACGGCTGGG22324605.192441372448829No Hit
CACTCGCCGAATCCCGGGGCCGAGGGAG12283842.857077798865011No Hit
GCGCCGCGACCGGCTCCGGGACGGCTGGG10714662.4921048473756557No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATT10004272.3268764255193215No Hit
TGCGCCGCGACCGGCTCCGGGACGGCTGGG9760672.270217908980233No Hit
CACTCGCCGAATCCCGGGGCCGAGGG9067292.1089458145718867No Hit
CGCCGAGGGCGCACCACCGGCCCGTCTCGC7181121.6702446892002425No Hit
CACTCGCCGAATCCCGGGGCCGAGGGAGCG5935211.3804605662888478No Hit
CGCCGAGGGCGCACCACCGGCCCGTCTCG5338531.2416797631339083No Hit
ACTCGCCGAATCCCGGGGCCGAGGGAG5226291.2155740492736977No Hit
CACTCGCCGAATCCCGGGGCCGAGGGA5143451.1963064322371701No Hit
GTGCGCCGCGACCGGCTCCGGGACGGCTGGG4593031.068285165104801No Hit
GAGGGCGCACCACCGGCCCGTCTCG3238080.7531396109806717No Hit
AACGATGCCGACCGGCGATGCGGCGGCG3214690.7476993700042789No Hit
GCCGCGACCGGCTCCGGGACGGCTGGG2949790.6860867220929302No Hit
ACTCGCCGAATCCCGGGGCCGAGGGA2945130.6850028604875438No Hit
CACTCGCCGAATCCCGGGGCCGAGGGAGCGA2941090.6840632036451056No Hit
AGGGCGCACCACCGGCCCGTCTCGC2861780.6656166234040748No Hit
TTGAACCCCATTCGTGATGGGGATCGGGGATT2737820.6367849743474845No Hit
CACTCGCCGAATCCCGGGGCCGAGGGAGC2412960.5612263303290597No Hit
CGCGACCGGCTCCGGGACGGCTGGG2357950.5484316464422976No Hit
CGCCGAGGGCGCACCACCGGCCCGTCTC1980490.4606388564059908No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCG1795970.4177216582459226No Hit
ACTCGCCGAATCCCGGGGCCGAGGG1746120.406127130128215No Hit
GGTGCGCCGCGACCGGCTCCGGGACGGCTGGG1406270.32708198708302116No Hit
AAACGATGCCGACCGGCGATGCGGCGGCG1273910.2962965960768071No Hit
GTCCGCCCGGAGGATTCAACCCGGCGGCGG1261190.29333807255309113No Hit
TCGCTTCTGGCGCCAAGCGCCCGG1249690.2906633067887253No Hit
ACTCGCCGAATCCCGGGGCCGAGGGAGCG1228160.2856556801011778No Hit
CGCCGCGACCGGCTCCGGGACGGCTGG1205040.28027823797316576No Hit
GGGAGAGCGACGCTCAGACAGG1203730.2799735472643554No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGC1198070.27865709733163274No Hit
CACTCGCCGAATCCCGGGGCCGAGG1170240.2721841641818674No Hit
ACGATGCCGACCGGCGATGCGGCGGCG1131200.26310391588266374No Hit
CCGCGACCGGCTCCGGGACGGCTGGG1082770.2518396631897736No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATTG1059100.24633429748172664No Hit
CGCTTCTGGCGCCAAGCGCCCGG1001500.23293720982716384No Hit
AACGATGCCGACCGGCGATGCGGCGGC950800.22114498163122057No Hit
AGTCCGCCCGGAGGATTCAACCCGGCGGCGGG908560.21132045068454117No Hit
GTGCGCCGCGACCGGCTCCGGGACGGCTGG886110.2060988427358444No Hit
GCGACCGGCTCCGGGACGGCTGGG855370.19894907755353083No Hit
CGCCGCGACCGGCTCCGGGACGGCTGGGA843910.19628361532225846No Hit
CGGTGCGCCGCGACCGGCTCCGGGACGGCTGGG831330.19335765416436956No Hit
TCGCCGAATCCCGGGGCCGAGGG773600.17993033002725306No Hit
CGTTGAACCCCATTCGTGATGGGGATCGGGGATTG765510.17804869045910354No Hit
TGCGCCGCGACCGGCTCCGGGACGGCTGG741240.17240377175465493No Hit
GCGCCGCGACCGGCTCCGGGACGGCTGG738570.17178276092066738No Hit
CGTTGAACCCCATTCGTGATGGGGATCGGGGATT726840.16905449984101426No Hit
TAAACGATGCCGACCGGCGATGCGGCGGCG704860.16394220840616544No Hit
ACTCGCCGAATCCCGGGGCCGAGGGAGC696080.16190008289215396No Hit
CGAGGGCGCACCACCGGCCCGTCTCG693030.16119068849377868No Hit
GTCCGCCCGGAGGATTCAACCCGGCGGCGGG691790.16090227896788184No Hit
CTCCATCTAAGGCTAAATACCG679620.1580716790242008No Hit
ACTCGCCGAATCCCGGGGCCGAGGGAGCGA674640.15691338915406672No Hit
GGGAGAGCGACGCTCAGACAGGC650960.15140569756274647No Hit
GGTGCGCCGCGACCGGCTCCGGGACGGCTGG634970.14768661020864127No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGAT601660.1399390930250738No Hit
ACGATGCCGACCGGCGATGCGGCGGC591450.1375643662029716No Hit
AGTCCGCCCGGAGGATTCAACCCGGCGGCGG553860.12882137097840538No Hit
CGGTGCGCCGCGACCGGCTCCGGGACGGCTGG523420.12174138229429265No Hit
CGACCGGCTCCGGGACGGCTGGG489830.11392874037907107No Hit
TGAACCCCATTCGTGATGGGGATCGGGGATT484260.11263322339580865No Hit
GCCGAGGGCGCACCACCGGCCCGTCTCGC456260.10612075023039619No Hit
GCGCCGCGACCGGCTCCGGGACGGCTGGGA453670.10551834646259553No Hit
AGGCGTAGCCCCGGGAGGAACCCGGGGCCGC435600.10131547538763112No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)