FastQCFastQC Report
Sat 16 Sept 2023
SRR15513174.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR15513174.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences60009563
Total Bases1.8 Gbp
Sequences flagged as poor quality0
Sequence length1-51
%GC66

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTGAACCCCATTCGTGATGGGGATCGGGGATT633839310.5623048779742No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGC38237356.371876095814928No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCG17016882.835694704192397No Hit
GTGGGGGGGCCGGGCCACCCCTCCCACGGCG14508232.4176529997393916No Hit
AGTCCGCCCGGAGGATTCAACCCGGCGGCGGG14459792.4095809529557815No Hit
CACTCGCCGAATCCCGGGGCCGAGGGAGCG13229932.2046369509473016No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATTG12410712.0681220424817957No Hit
CGCCGAGGGCGCACCACCGGCCCGTCTCGC12136542.0224343243426053No Hit
TTGAACCCCATTCGTGATGGGGATCGGGGATT11917321.985903480083666No Hit
CACTCGCCGAATCCCGGGGCCGAGGGAGCGA8951371.491657254694556No Hit
CGTTGAACCCCATTCGTGATGGGGATCGGGGATTG8486951.4142662561965331No Hit
TGGGGGGGCCGGGCCACCCCTCCCACGGCG6239131.0396892908551927No Hit
ATTGATCATCGACACTTCGAACGCA5384590.8972886538100602No Hit
AACGATGCCGACCGGCGATGCGGCGGCG5022030.8368716166121722No Hit
GTGGGGGGGCCGGGCCACCCCTCCCACGGCGC4502630.7503187450306879No Hit
CACTCGCCGAATCCCGGGGCCGAGGGAGC4401400.73344976699797No Hit
GTGCGCCGCGACCGGCTCCGGGACGGCTGGG3737960.6228940544026291No Hit
CGTTGAACCCCATTCGTGATGGGGATCGGGGATT3259330.5431350999839809No Hit
TGCGCCGCGACCGGCTCCGGGACGGCTGGG3094890.5157328007871012No Hit
GTCCGCCCGGAGGATTCAACCCGGCGGCGGG3035090.5057677223878467No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTC2959110.4931064070571552No Hit
CGCCGAGGGCGCACCACCGGCCCGTCTCG2954190.49228653773066133No Hit
AAACGATGCCGACCGGCGATGCGGCGGCG2852420.4753275740401576No Hit
GGTGCGCCGCGACCGGCTCCGGGACGGCTGGG2707960.4512547441813565No Hit
CACTCGCCGAATCCCGGGGCCGAGGGAG2703210.45046320367305454No Hit
TGAACCCCATTCGTGATGGGGATCGGGGATT2585760.4308913231046192No Hit
ATTGATCATCGACACTTCGAACGCAC2484640.4140406754836725No Hit
GCCGAGGGCGCACCACCGGCCCGTCTCGC2309390.3848369967300045No Hit
GTGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGC2183610.36387700407016793No Hit
ACCGCCTGGGAATACCGGGTGCTGTAGGCTT2147430.35784796499851196No Hit
GCACTCGCCGAATCCCGGGGCCGAGGGAGCGA2119760.35323703323751915No Hit
TGGGGGGGCCGGGCCACCCCTCCCACGGCGC2084860.3474212935028372No Hit
CACTCGCCGAATCCCGGGGCCGAGGGAGCGAG2084230.3473163102354203No Hit
TTGATCATCGACACTTCGAACGCA2063790.3439101864481166No Hit
AGCACTCGCCGAATCCCGGGGCCGAGGGAGCGA2059890.3432602900307739No Hit
CGGTGCGCCGCGACCGGCTCCGGGACGGCTGGG2053960.342272114196199No Hit
ATTGATCATCGACACTTCGAACGC2027500.33786281696468945No Hit
ACTCGCCGAATCCCGGGGCCGAGGGAGCG1904590.3173810814119743No Hit
GCGCCGCGACCGGCTCCGGGACGGCTGGG1826670.3043964842736815No Hit
TTGAACCCCATTCGTGATGGGGATCGGGGATTG1688660.28139848310510107No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGAT1615920.269277081721125No Hit
CAGTCCGCCCGGAGGATTCAACCCGGCGGCGGG1614210.2689921271381363No Hit
CGCCGAGGGCGCACCACCGGCCCGTCTC1521610.25356125322892287No Hit
TTGATCATCGACACTTCGAACGCAC1509170.2514882502977067No Hit
AGTCCGCCCGGAGGATTCAACCCGGCGGCGG1475940.24595079954173302No Hit
TAAACGATGCCGACCGGCGATGCGGCGGCG1361590.22689550330503155No Hit
ACTCGCCGAATCCCGGGGCCGAGGGAGCGA1243650.20724196908416082No Hit
CGACTGCATAATTTGTGGTAGTGGGG1214830.2024394012001054No Hit
AGCACTCGCCGAATCCCGGGGCCGAGGGAGCG1142790.19043464789103695No Hit
AGCACTCGCCGAATCCCGGGGCCGAGGGAGC1127670.18791504947303148No Hit
GACTGCATAATTTGTGGTAGTGGGG1044150.17399726773547744No Hit
TCCGCCGAGGGCGCACCACCGGCCCGTCTCG1040920.17345902018983209No Hit
GCACTCGCCGAATCCCGGGGCCGAGGGAGCG1026740.1710960634724169No Hit
CAGTGCGCCCCGGGCGGGTCGCGCCGTCGGG959330.15986285385880913No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCTGAA947750.1579331614196224No Hit
CGACTGCATAATTTGTGGTAGTGGGGG923320.15386214360534503No Hit
TGCGCCGCGACCGGCTCCGGGACGGCTGGGA900360.15003608674837374No Hit
GTGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACC859460.14322050637162614No Hit
ACTCGCCGAATCCCGGGGCCGAGGGAGC774100.12899610683717194No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCC770820.12844952728617604No Hit
GTGCGCCGCGACCGGCTCCGGGACGGCTGGGA745500.12423019977665893No Hit
GCCGAGGGCGCACCACCGGCCCGTCTCG740690.12342866086193628No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCTGA712670.11875940506348964No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCT712120.11866775300463361No Hit
AGCACTCGCCGAATCCCGGGGCCGAGGGAGCGAG699920.1166347436991001No Hit
ACTCGCCGAATCCCGGGGCCGAGGGAG664010.11065069745633709No Hit
CAGTGCGCCCCGGGCGGGTCGCGCCGTCGGGC650170.10834439837530561No Hit
TTGATCATCGACACTTCGAACGC635950.10597477605360998No Hit
GACCGCCTGGGAATACCGGGTGCTGTAGGCTT634560.10574314630486478No Hit
GTGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCG618710.10310190060874132No Hit
GAACCCCATTCGTGATGGGGATCGGGGATT615000.10248366581173071No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCC613510.1022353720522844No Hit
GACCTGGTATTGCAGTACCTCCAGG610400.10171712131948037No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)