FastQCFastQC Report
Sat 16 Sept 2023
SRR15513176.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR15513176.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences33144062
Total Bases970.3 Mbp
Sequences flagged as poor quality0
Sequence length1-51
%GC67

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CACTCGCCGAATCCCGGGGCCGAGGGAGCG15166154.575827187385783No Hit
CACTCGCCGAATCCCGGGGCCGAGGGAG11842763.573116656612578No Hit
CACTCGCCGAATCCCGGGGCCGAGGGAGCGA9634392.9068223442256413No Hit
TGCGCCGCGACCGGCTCCGGGACGGCTGGG8795312.653660857863469No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATT8149282.4587450988958444No Hit
GCGCCGCGACCGGCTCCGGGACGGCTGGG7777502.346574176695663No Hit
GTGCGCCGCGACCGGCTCCGGGACGGCTGGG6567751.981576669751583No Hit
CACTCGCCGAATCCCGGGGCCGAGGGAGC6097341.8396477776320839No Hit
CGCCGAGGGCGCACCACCGGCCCGTCTCGC6009751.813220721105337No Hit
AGTCCGCCCGGAGGATTCAACCCGGCGGCGGG4660021.40598940467828No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCG3588141.0825890924292865No Hit
CGCCGAGGGCGCACCACCGGCCCGTCTCG3578181.079584029259902No Hit
ACTCGCCGAATCCCGGGGCCGAGGGAG3543731.0691900105665988No Hit
AACGATGCCGACCGGCGATGCGGCGGCG3254160.9818229280406247No Hit
GGTGCGCCGCGACCGGCTCCGGGACGGCTGGG3229210.9742951844586822No Hit
GTCCGCCCGGAGGATTCAACCCGGCGGCGGG2904790.8764133979715582No Hit
GTCCGCCCGGAGGATTCAACCCGGCGGCGG2766570.8347106036671064No Hit
ACTCGCCGAATCCCGGGGCCGAGGGAGCG2553770.770506041172624No Hit
AGTCCGCCCGGAGGATTCAACCCGGCGGCGG2482130.7488913097012672No Hit
CGGTGCGCCGCGACCGGCTCCGGGACGGCTGGG2376920.7171480671258701No Hit
ACCGCCTGGGAATACCGGGTGCTGTAGGCTT2298080.6933610008332715No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGC2211920.6673653941390768No Hit
TTGAACCCCATTCGTGATGGGGATCGGGGATT2134620.6440429661276882No Hit
GTGGGGGGGCCGGGCCACCCCTCCCACGGCG1720620.5191337139062798No Hit
CGTTGAACCCCATTCGTGATGGGGATCGGGGATTG1693090.5108275503467258No Hit
CACTCGCCGAATCCCGGGGCCGAGGGA1608100.485184948060983No Hit
ACTCGCCGAATCCCGGGGCCGAGGGAGCGA1513630.45668210492727174No Hit
AAACGATGCCGACCGGCGATGCGGCGGCG1472170.4441730769149539No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATTG1467970.4429058816025628No Hit
ACTCGCCGAATCCCGGGGCCGAGGGAGC1286920.38828071224341787No Hit
CGCCGCGACCGGCTCCGGGACGGCTGGG1172960.3538974794338727No Hit
CGTTGAACCCCATTCGTGATGGGGATCGGGGATT1140000.3439530133632987No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCC1045260.3153687076737909No Hit
CACTCGCCGAATCCCGGGGCCGAGGGAGCGAG1027750.3100857100737984No Hit
ATTGATCATCGACACTTCGAACGCA973650.2937630275975226No Hit
GCGCCGCGACCGGCTCCGGGACGGCTGGGA972090.2932923550529202No Hit
GCACTCGCCGAATCCCGGGGCCGAGGGAGCGA956430.2885675268167191No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGC845080.2549717653798741No Hit
AAACCTGCATTAAAAATTTCGGTTGGG810710.24460188374014025No Hit
AGCCCGTGGACGGTGTGAGGCCGGT800330.24147010103951652No Hit
TGCGCCGCGACCGGCTCCGGGACGGCTGGGA797170.24051668742352703No Hit
CGCCGCGACCGGCTCCGGGACGGCTGGGA788540.23791290276973295No Hit
GTGCGCCGCGACCGGCTCCGGGACGGCTGG755360.22790205980184322No Hit
CGGTGCGCCGCGACCGGCTCCGGGACGGCTGG723650.2183347351932904No Hit
CTAAACCATTCGTAGACGACCTGCTT685200.20673386382151954No Hit
CTCGCTTCTGGCGCCAAGCGCCCGG676550.20412404490433309No Hit
TGGGGGGGCCGGGCCACCCCTCCCACGGCG669620.20203317263888776No Hit
CGCCGAGGGCGCACCACCGGCCCGTCTC657900.19849709429097737No Hit
GGTGCGCCGCGACCGGCTCCGGGACGGCTGG655980.19791780500531286No Hit
GGCGGTGCGCCGCGACCGGCTCCGGGACGGCTGGG647200.1952687633760762No Hit
ATTGATCATCGACACTTCGAACGC579970.17498458698273012No Hit
TTGATCATCGACACTTCGAACGCA575400.17360575779758075No Hit
GCACTCGCCGAATCCCGGGGCCGAGGGAGCG562120.16959900690506793No Hit
GCCGAGGGCGCACCACCGGCCCGTCTCGC538790.162560038657905No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCC519190.15664646053341322No Hit
TAAACGATGCCGACCGGCGATGCGGCGGCG516560.15585295489732065No Hit
TGAACCCCATTCGTGATGGGGATCGGGGATT514180.1551348775536324No Hit
GCACTCGCCGAATCCCGGGGCCGAGGGAG506870.1529293542837326No Hit
AGCACTCGCCGAATCCCGGGGCCGAGGGAGCGA496570.14982170863667826No Hit
CGGCGGTGCGCCGCGACCGGCTCCGGGACGGCTGGG479740.14474387599202534No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCTGA453130.1367152885485189No Hit
AGCACTCGCCGAATCCCGGGGCCGAGGGAGCG442630.13354730026754114No Hit
TTTTCACTGACCCGGTGAGGCGGGG439920.13272965757787927No Hit
AGCACTCGCCGAATCCCGGGGCCGAGGGAG422640.12751605400689875No Hit
CGCCGCGACCGGCTCCGGGACGGCTGGGAAG421750.12724752928593966No Hit
AGCACTCGCCGAATCCCGGGGCCGAGGGAGC420550.12688547348239937No Hit
ATTGATCATCGACACTTCGAACGCAC418500.12626696148468466No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCTGAA406960.1227851915073053No Hit
AGCCCGTGGACGGTGTGAGGCCGGTAGCGGCCCCCG404130.12193134323728938No Hit
GCGGTGCGCCGCGACCGGCTCCGGGACGGCTGGG391120.11800605490057314No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGAT383180.11561045233381474No Hit
AGCCCGTGGACGGTGTGAGGCCGGTAGCG378380.11416222911965347No Hit
GTGCGCCGCGACCGGCTCCGGGACGGCTGGGA374460.1129795134947551No Hit
CTCGCTTCTGGCGCCAAGCGCCCGGC369000.11133215958864667No Hit
GCCGAGGGCGCACCACCGGCCCGTCTCG367700.11093993246814467No Hit
GCACTCGCCGAATCCCGGGGCCGAGGGAGC362880.10948567499059107No Hit
ATTGATCATCGACACTTCGAACG362330.10931973274730176No Hit
TGCGCCGCGACCGGCTCCGGGACGGCTGG359300.10840554184336247No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGC359000.10831502789247739No Hit
TGGCGCTGGAGCGTCGGGCCCAT347940.10497808023651414No Hit
CTCTAGCATCACCAGTATTAGAGG347280.10477894954456698No Hit
GCGCCGCGACCGGCTCCGGGACGGCTGGGAAG340400.10270316293760251No Hit
CCGCCTGGGAATACCGGGTGCTGTAGGCTT335700.10128511104040296No Hit
TGCGCCGCGACCGGCTCCGGGACGGCTGGGAAG334250.10084762694445842No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)