FastQCFastQC Report
Sat 16 Sept 2023
SRR15513179.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR15513179.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences28208731
Total Bases830.4 Mbp
Sequences flagged as poor quality0
Sequence length1-51
%GC69

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AACGATGCCGACCGGCGATGCGGCGGCG17966946.36928332579016No Hit
GTGGGGGGGCCGGGCCACCCCTCCCACGGCG13441954.765173591112624No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGC12760914.5237447937661575No Hit
TGGGGGGGCCGGGCCACCCCTCCCACGGCG9124403.234601372177997No Hit
AAACGATGCCGACCGGCGATGCGGCGGCG7638562.70787083616062No Hit
AGTCCGCCCGGAGGATTCAACCCGGCGGCGGG6457482.289177772654856No Hit
TAAACGATGCCGACCGGCGATGCGGCGGCG5479811.942593589197614No Hit
GTGGGGGGGCCGGGCCACCCCTCCCACGGCGC4987821.7681830494253714No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCG4060301.439377049609215No Hit
CGCCGAGGGCGCACCACCGGCCCGTCTCGC3922461.39051274585872No Hit
TGGGGGGGCCGGGCCACCCCTCCCACGGCGC3425651.2143935152559682No Hit
AAAACGATGCCGACCGGCGATGCGGCGGCG2946131.0444035926323663No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATT2733720.9691042110331017No Hit
CACTCGCCGAATCCCGGGGCCGAGGGAGCG2667410.9455973046075699No Hit
ACGATGCCGACCGGCGATGCGGCGGCG2273890.8060943968021816No Hit
AACGATGCCGACCGGCGATGCGGCGGC2070210.7338898017071381No Hit
GTGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGC1894190.6714906813780457No Hit
CACTCGCCGAATCCCGGGGCCGAGGGAGCGA1622010.5750028244801229No Hit
GTCCGCCCGGAGGATTCAACCCGGCGGCGGG1420890.5037057498261798No Hit
ATAAACGATGCCGACCGGCGATGCGGCGGCG1050200.37229608095451017No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATTG1020770.3618631408835796No Hit
ACCGCCTGGGAATACCGGGTGCTGTAGGCTT906720.3214323962322162No Hit
CGTTGAACCCCATTCGTGATGGGGATCGGGGATTG769270.27270634754892026No Hit
CGACTGCATAATTTGTGGTAGTGGGGG766830.2718413671284965No Hit
GTGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACC682330.24188610256874016No Hit
CACTCGCCGAATCCCGGGGCCGAGGGAGC677270.24009233169687783No Hit
GACTGCATAATTTGTGGTAGTGGGG672460.23838718586809168No Hit
TTGAACCCCATTCGTGATGGGGATCGGGGATT655150.23225078788549547No Hit
CAGTCCGCCCGGAGGATTCAACCCGGCGGCGGG651060.23080088218076877No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCC644840.2285958911090329No Hit
TCGCTTCTGGCGCCAAGCGCCCGGC628340.22274663826600352No Hit
CGCCGAGGGCGCACCACCGGCCCGTCTCG616150.2184252811656079No Hit
AAACGATGCCGACCGGCGATGCGGCGGC613530.21749649071416932No Hit
AACGATGCCGACCGGCGATGCGGCGGCGT613450.21746813070038493No Hit
GACTGCATAATTTGTGGTAGTGGGGG608460.21569917484058396No Hit
CTCGCTTCTGGCGCCAAGCGCCCGG606940.2151603345786806No Hit
CACTCGCCGAATCCCGGGGCCGAGGGAG605950.21480937940809886No Hit
CGACTGCATAATTTGTGGTAGTGGGG597980.21198401303482955No Hit
GTGCGCCGCGACCGGCTCCGGGACGGCTGGG589890.20911610664088362No Hit
GTGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCG574790.20376315403908102No Hit
CACTCGCCGAATCCCGGGGCCGAGGGAGCGAG571350.2025436734463525No Hit
GGTGCGCCGCGACCGGCTCCGGGACGGCTGGG559240.19825067635974125No Hit
TCCGCCGAGGGCGCACCACCGGCCCGTCTCG535970.19000145735020835No Hit
TGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACC521840.1849923699155414No Hit
AACGATGCCGACCGGCGATGCGGCGGCGTT507080.17975994737232243No Hit
GCCGAGGGCGCACCACCGGCCCGTCTCGC506480.17954724726893953No Hit
CGACTGCATAATTTGTGGTAGTGGGGGA500540.17744151624544896No Hit
TGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGC499960.17723590614551218No Hit
TCCGCCGAGGGCGCACCACCGGCCCGTCTCGC492970.17475794994110158No Hit
ATTGATCATCGACACTTCGAACGCA478700.16969923248231195No Hit
CTCGCTTCTGGCGCCAAGCGCCCGGCCG470590.16682423608491995No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTC462730.16403786473060414No Hit
GCGCGCGGGTCGGGGGGCGGGGCGGACTGT460910.1633926744170094No Hit
TGTGGGGGGGCCGGGCCACCCCTCCCACGGCG452710.16048577300410996No Hit
TGCGCCGCGACCGGCTCCGGGACGGCTGGG441590.15654373108808048No Hit
GTCTAGCGGTTAGGATTCCTGG441110.1563735710053742No Hit
CAGTGCGCCCCGGGCGGGTCGCGCCGTCGGG436810.15484922026446352No Hit
GTGGGGGGGCCGGGCCACCCCTCCCACGGC433490.15367227969241154No Hit
CTCGCTTCTGGCGCCAAGCGCCCGGC428210.15180051878264214No Hit
GACCTGGTATTGCAGTACCTCCAGG422870.14990748786253447No Hit
GCCCGGCTAGCTCAGTCGGTAGAGCATGAGA394280.13977232793633998No Hit
GTGGGGGGGCCGGGCCACCCCTCCCACGGCGCG382000.13541906582043695No Hit
GTCTAGGGGTATGATTCTCGCTT379250.1344441903465987No Hit
TAAACGATGCCGACCGGCGATGCGGCGGC366800.13003066320140386No Hit
CAGTGCGCCCCGGGCGGGTCGCGCCGTCGGGCCCGGGG362580.12853467247427755No Hit
CGAGGGCGCACCACCGGCCCGTCTCGC362240.12841414241569393No Hit
TCGACTGCATAATTTGTGGTAGTGGGGG347610.12322780489487457No Hit
TGGGGGGGCCGGGCCACCCCTCCCACGGC339520.12035989850092868No Hit
ACTGCATAATTTGTGGTAGTGGGGG336030.11912269289958488No Hit
AACGATGCCGACCGGCGATGCGGCGG333950.1183853325411909No Hit
CGGTGCGCCGCGACCGGCTCCGGGACGGCTGGG326300.11567340622305909No Hit
TCGCTTCTGGCGCCAAGCGCCCGG318050.11274877980154442No Hit
ACTGCATAATTTGTGGTAGTGGGG316150.11207522947416527No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCC315940.11200078443798127No Hit
AGTCCGCCCGGAGGATTCAACCCGGCGGCGG308950.10952282823357067No Hit
GACTGCATAATTTGTGGTAGTGGGGGA306850.10877837787173056No Hit
AGTCCGCCCGGAGGATTCAACCCGGCGGCGGGT295240.10466263087127174No Hit
TCGACTGCATAATTTGTGGTAGTGGGGGA293020.10387564048875506No Hit
GCCCGGCTAGCTCAGTCGGTAGAGCATGGGA289120.10249308981676632No Hit
AAACGATGCCGACCGGCGATGCGGCGGCGT287330.1018585345083407No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)