FastQCFastQC Report
Sat 16 Sept 2023
SRR15513181.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR15513181.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences26153331
Total Bases755.8 Mbp
Sequences flagged as poor quality0
Sequence length1-51
%GC67

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AACGATGCCGACCGGCGATGCGGCGGCG17791716.80284664312932No Hit
GTGGGGGGGCCGGGCCACCCCTCCCACGGCG12333544.715858182653674No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGC11325394.330381472249176No Hit
AAACGATGCCGACCGGCGATGCGGCGGCG8486833.2450283292785915No Hit
TAAACGATGCCGACCGGCGATGCGGCGGCG5696772.178219669226838No Hit
TGGGGGGGCCGGGCCACCCCTCCCACGGCG5603982.1427404409786273No Hit
GTGGGGGGGCCGGGCCACCCCTCCCACGGCGC5118641.9571656092296619No Hit
AGTCCGCCCGGAGGATTCAACCCGGCGGCGGG3731621.4268239865889358No Hit
ACGATGCCGACCGGCGATGCGGCGGCG2975531.1377250568961943No Hit
CGCCGAGGGCGCACCACCGGCCCGTCTCGC2814651.076210904071837No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCG2769991.0591346853676116No Hit
TGGGGGGGCCGGGCCACCCCTCCCACGGCGC2434020.9306730374039162No Hit
AAAACGATGCCGACCGGCGATGCGGCGGCG1947370.7445973134359061No Hit
TCGCTTCTGGCGCCAAGCGCCCGG1660060.634741326066649No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATT1429130.5464428221399408No Hit
AACGATGCCGACCGGCGATGCGGCGGC1354140.517769610303177No Hit
CACTCGCCGAATCCCGGGGCCGAGGGAGCG1238940.47372168386504954No Hit
TCGCTTCTGGCGCCAAGCGCCCGGC1203650.4602281827886474No Hit
ATAAACGATGCCGACCGGCGATGCGGCGGCG1054140.40306146853722No Hit
CTCGCTTCTGGCGCCAAGCGCCCGG1024840.3918583066914115No Hit
CGACTGCATAATTTGTGGTAGTGGGGG1024270.3916403612220562No Hit
GTGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGC1020820.3903212175917477No Hit
GAGGGCGCACCACCGGCCCGTCTCGC972630.37189526641940945No Hit
GTCTAGCGGTTAGGATTCCTGG856690.3275643932315926No Hit
CGACTGCATAATTTGTGGTAGTGGGGGA790830.30238213250923945No Hit
GTCCGCCCGGAGGATTCAACCCGGCGGCGGG780930.29859676383096284No Hit
GACTGCATAATTTGTGGTAGTGGGGG767770.2935649000121629No Hit
AACGATGCCGACCGGCGATGCGGCGGCGT669870.2561318097492056No Hit
GACTGCATAATTTGTGGTAGTGGGG661970.25311116201603534No Hit
ACCGCCTGGGAATACCGGGTGCTGTAGGCTT660880.2526943891009524No Hit
CTCGCTTCTGGCGCCAAGCGCCCGGCCG653770.2499758061410992No Hit
CGACTGCATAATTTGTGGTAGTGGGG609610.2330907676731503No Hit
TCGACTGCATAATTTGTGGTAGTGGGGG606730.23198956951219715No Hit
TCGACTGCATAATTTGTGGTAGTGGGGGA600670.22967246504852482No Hit
AACGATGCCGACCGGCGATGCGGCGGCGTT591220.22605915858289716No Hit
CACTCGCCGAATCCCGGGGCCGAGGGAGCGA581870.2224840881645248No Hit
GTGGGGGGGCCGGGCCACCCCTCCCACGGC566580.21663779653918655No Hit
GTGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACC557810.21328449519489506No Hit
CTCGCTTCTGGCGCCAAGCGCCCGGC545520.20858528498721635No Hit
GTCTAGGGGTATGATTCTCGCTT540830.20679201437094188No Hit
TCCGCCGAGGGCGCACCACCGGCCCGTCTCGC533490.20398548850240147No Hit
GACCTGGTATTGCAGTACCTCCAGG531250.20312900104388232No Hit
GACTGCATAATTTGTGGTAGTGGGGGA485520.18564365663402493No Hit
ATTGATCATCGACACTTCGAACGCA482510.18449275161163983No Hit
TCCGCCGAGGGCGCACCACCGGCCCGTCTCG477300.1825006535496377No Hit
ACGATGCCGACCGGCGATGCGGCGGC443000.1693856893410633No Hit
GCCGAGGGCGCACCACCGGCCCGTCTCGC421620.16121082243787607No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATTG416120.15910783983883353No Hit
CGAGGGCGCACCACCGGCCCGTCTCGC413670.15817105668107823No Hit
CAGTCCGCCCGGAGGATTCAACCCGGCGGCGGG408710.15627454873721439No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCC407460.1557965981465229No Hit
CACTCGCCGAATCCCGGGGCCGAGGGAGC406190.15531100034638035No Hit
CACTCGCCGAATCCCGGGGCCGAGGGAG398790.15248153284948676No Hit
AAACGATGCCGACCGGCGATGCGGCGGC386020.14759878961498252No Hit
ATCGTATAGTGGTTAGTACTCTGC379790.14521668387097614No Hit
CAGTGCGCCCCGGGCGGGTCGCGCCGTCGGG365510.13975657632291658No Hit
GTGCGCCGCGACCGGCTCCGGGACGGCTGGG363130.13884655839823998No Hit
AAACGATGCCGACCGGCGATGCGGCGGCGT359150.13732476371747826No Hit
CGCCGAGGGCGCACCACCGGCCCGTCTCG354140.13540913774998678No Hit
CGCCGGCCGAGGTGGGATCCCGAGGCC354130.13540531414526127No Hit
GTGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCG335310.12820929005181023No Hit
CGCTTCTGGCGCCAAGCGCCCGGC328710.12568571093295916No Hit
GGTGCGCCGCGACCGGCTCCGGGACGGCTGGG313340.11980883046981664No Hit
ACTGCATAATTTGTGGTAGTGGGGG312780.11959470860518685No Hit
TGGGGGGGCCGGGCCACCCCTCCCACGGC298200.11401989291536134No Hit
TGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACC296660.11343105778762942No Hit
GCCCGGCTAGCTCAGTCGGTAGAGCATGAGA296180.11324752476080388No Hit
TCGACTGCATAATTTGTGGTAGTGGGG285770.10926715224152518No Hit
ATTGATCATCGACACTTCGAACGCAC280310.10717946406138476No Hit
TAAACGATGCCGACCGGCGATGCGGCGGCGT279440.10684681045026348No Hit
TGCGCCGCGACCGGCTCCGGGACGGCTGGG275630.10539001704983582No Hit
CGATGCCGACCGGCGATGCGGCGGCG275380.10529442693169754No Hit
GCCCGGCTAGCTCAGTCGGTAGAGCATGGG269360.10299261688692732No Hit
GCCGGCCGAGGTGGGATCCCGAGGCC267230.10217818908038903No Hit
TTGAACCCCATTCGTGATGGGGATCGGGGATT261640.10004079403881669No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)