FastQCFastQC Report
Sat 16 Sept 2023
SRR15513183.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR15513183.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences38770476
Total Bases1.1 Gbp
Sequences flagged as poor quality0
Sequence length1-51
%GC66

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCGCCGAGGGCGCACCACCGGCCCGTCTCGC21866245.639920438428458No Hit
AACGATGCCGACCGGCGATGCGGCGGCG13746063.5454968363039954No Hit
AGTCCGCCCGGAGGATTCAACCCGGCGGCGGG7964632.0543028669547416No Hit
GTGGGGGGGCCGGGCCACCCCTCCCACGGCG7539721.9447065854956231No Hit
CGCCGAGGGCGCACCACCGGCCCGTCTCGC6310481.6276508960065388No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCG6279381.6196293282548297No Hit
AAACGATGCCGACCGGCGATGCGGCGGCG6201061.5994283897881472No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATT5937331.5314049793972095No Hit
TAAACGATGCCGACCGGCGATGCGGCGGCG4597071.1857140985320893No Hit
TGGGGGGGCCGGGCCACCCCTCCCACGGCG4194461.0818696164576365No Hit
CACTCGCCGAATCCCGGGGCCGAGGGAGCG4154091.0714570540738266No Hit
GTGGGGGGGCCGGGCCACCCCTCCCACGGCGC3089610.796897618693152No Hit
ACGATGCCGACCGGCGATGCGGCGGCG2532970.6533244523487408No Hit
TCGCTTCTGGCGCCAAGCGCCCGG2509410.6472476634024302No Hit
TCGCTTCTGGCGCCAAGCGCCCGGC2491730.642687492410462No Hit
CACTCGCCGAATCCCGGGGCCGAGGGAGCGA2376530.6129741610600808No Hit
AAAACGATGCCGACCGGCGATGCGGCGGCG2144660.553168343870733No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATTG2126340.5484430988157071No Hit
ATTGATCATCGACACTTCGAACGCA2080100.5365164977597903No Hit
CTCGCTTCTGGCGCCAAGCGCCCGG1990780.5134783488343038No Hit
AACGATGCCGACCGGCGATGCGGCGGC1972060.5086499324898668No Hit
GTGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGC1888650.4871361393654285No Hit
GTCCGCCCGGAGGATTCAACCCGGCGGCGGG1771120.456821835254228No Hit
TGGGGGGGCCGGGCCACCCCTCCCACGGCGC1693220.4367292266414268No Hit
GAGGGCGCACCACCGGCCCGTCTCGC1609790.415210274952518No Hit
CACTCGCCGAATCCCGGGGCCGAGGGAG1519230.39185229502985724No Hit
CGTTGAACCCCATTCGTGATGGGGATCGGGGATTG1488900.38402933201026473No Hit
CTCGCTTCTGGCGCCAAGCGCCCGGCCG1464190.37765592560689737No Hit
TTGAACCCCATTCGTGATGGGGATCGGGGATT1454890.3752571931280906No Hit
CACTCGCCGAATCCCGGGGCCGAGGGAGC1341880.3461087245872349No Hit
ATTGATCATCGACACTTCGAACGCAC1338580.34525756144959374No Hit
ACCGCCTGGGAATACCGGGTGCTGTAGGCTT1331200.34335405115996No Hit
TTGATCATCGACACTTCGAACGCA1174050.3028206308325954No Hit
CGCCGAGGGCGCACCACCGGCCCGTCTCG1054870.27208074515257435No Hit
GTGCGCCGCGACCGGCTCCGGGACGGCTGGG1015850.26201638587052684No Hit
GACTGCATAATTTGTGGTAGTGGGG1003440.2588154966165491No Hit
CTCGCTTCTGGCGCCAAGCGCCCGGC1001250.2582506338070237No Hit
CGACTGCATAATTTGTGGTAGTGGGGG977100.2520216672088318No Hit
CGACTGCATAATTTGTGGTAGTGGGG964640.2488078815436777No Hit
TGCGCCGCGACCGGCTCCGGGACGGCTGGG907880.23416787557625035No Hit
CACTCGCCGAATCCCGGGGCCGAGGGAGCGAG895920.23108305402286008No Hit
CGAGGGCGCACCACCGGCCCGTCTCGC893380.23042791633509993No Hit
ATAAACGATGCCGACCGGCGATGCGGCGGCG890080.22957675319745882No Hit
TTGATCATCGACACTTCGAACGCAC878480.22658478580453847No Hit
GTCTAGGGGTATGATTCTCGCTT767830.19804502787120798No Hit
CAGTCCGCCCGGAGGATTCAACCCGGCGGCGGG746190.19246346111407042No Hit
GTCTAGCGGTTAGGATTCCTGG735100.18960303711514917No Hit
GACTGCATAATTTGTGGTAGTGGGGG726490.1873822751105764No Hit
GCCGAGGGCGCACCACCGGCCCGTCTCGC721860.18618806743564356No Hit
TCCGCCGAGGGCGCACCACCGGCCCGTCTCGC696890.17974759969415902No Hit
GACCTGGTATTGCAGTACCTCCAGG664960.1715119515169223No Hit
GGTGCGCCGCGACCGGCTCCGGGACGGCTGGG663450.1711224798993956No Hit
TCCGCCGAGGGCGCACCACCGGCCCGTCTCG653640.16859220402658973No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTC637500.16442924249885404No Hit
CGCCGGCCGAGGTGGGATCCCGAGGCC628340.16206661997134109No Hit
ATTGATCATCGACACTTCGAACGC622230.16049067852558735No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCTGA612910.15808678748231No Hit
ATTGATCATCGACACTTCGAACG592160.15273477684411202No Hit
CGACTGCATAATTTGTGGTAGTGGGGGA566080.1460080087745118No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCTGAA555380.14324817678276633No Hit
TCGACTGCATAATTTGTGGTAGTGGGGG546410.14093456061772364No Hit
AGTCCGCCCGGAGGATTCAACCCGGCGGCGG542800.14000343973078896No Hit
AAACGATGCCGACCGGCGATGCGGCGGC541440.13965265734679141No Hit
ACGATGCCGACCGGCGATGCGGCGGC536740.1384403946962116No Hit
GTGGGGGGGCCGGGCCACCCCTCCCACGGC508550.1311693980749682No Hit
GCGCCGCGACCGGCTCCGGGACGGCTGGG507260.13083667066661755No Hit
CATCTGTGGGATTATGACTGAAC499950.12895121535263068No Hit
AGCACTCGCCGAATCCCGGGGCCGAGGGAGCGA495140.12771058059746287No Hit
GTGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACC493420.12726694405299538No Hit
ACTGCATAATTTGTGGTAGTGGGG466000.12019455216386819No Hit
CGCCGCGACCGGCTCCGGGACGGCTGGG460250.11871146487858443No Hit
CAGTGCGCCCCGGGCGGGTCGCGCCGTCGGG459400.11849222588858595No Hit
CGGTGCGCCGCGACCGGCTCCGGGACGGCTGGG457330.11795831446588377No Hit
CGTTGAACCCCATTCGTGATGGGGATCGGGGATT453130.11687501592706781No Hit
CAGTGCGCCCCGGGCGGGTCGCGCCGTCGGGCCCGGGG450520.11620182326366074No Hit
TCGACTGCATAATTTGTGGTAGTGGGGGA441480.11387015212297111No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCC430720.11109484443781396No Hit
ACTGCATAATTTGTGGTAGTGGGGG424780.10956275079005995No Hit
CGCTTCTGGCGCCAAGCGCCCGGC422020.10885086889312373No Hit
GCCCGGCTAGCTCAGTCGGTAGAGCATGAGA420990.10858520282289029No Hit
AGCACTCGCCGAATCCCGGGGCCGAGGGAGCG419010.1080745049403056No Hit
TCGACTGCATAATTTGTGGTAGTGGGG418720.1079997057554826No Hit
TGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGC403020.10395023264609905No Hit
GACCGCCTGGGAATACCGGGTGCTGTAGGCTT399140.10294947113881192No Hit
GCACTCGCCGAATCCCGGGGCCGAGGGAGCGA395110.10191002039799561No Hit
GTGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCG392520.10124198629905912No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)