FastQCFastQC Report
Sat 16 Sept 2023
SRR15513184.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR15513184.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences25856072
Total Bases731.6 Mbp
Sequences flagged as poor quality0
Sequence length1-51
%GC69

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GAGGGCGCACCACCGGCCCGTCTCGC12354764.778281867408166No Hit
CACTCGCCGAATCCCGGGGCCGAGGGAGCG8795533.401727068210515No Hit
CACTCGCCGAATCCCGGGGCCGAGGGAG7771793.0057891237307817No Hit
CGCCGAGGGCGCACCACCGGCCCGTCTCGC7729662.989495078757516No Hit
AGTCCGCCCGGAGGATTCAACCCGGCGGCGGG7639462.9546096560993487No Hit
CACTCGCCGAATCCCGGGGCCGAGGGAGCGA6365542.461913008286796No Hit
GTCCGCCCGGAGGATTCAACCCGGCGGCGGG5098691.9719507278599784No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCG4642381.7954699383572261No Hit
CGCCGCGACCGGCTCCGGGACGGCTGGG4512861.7453772560658092No Hit
GTCCGCCCGGAGGATTCAACCCGGCGGCGG4494501.7382764095025725No Hit
CACTCGCCGAATCCCGGGGCCGAGGGAGC4375411.692217595928724No Hit
CGCCGAGGGCGCACCACCGGCCCGTCTCG4231671.6366252383579378No Hit
TGCGCCGCGACCGGCTCCGGGACGGCTGGG3954951.5296020215290242No Hit
AGTCCGCCCGGAGGATTCAACCCGGCGGCGG3340631.2920098613586781No Hit
TCGCTTCTGGCGCCAAGCGCCCGG3282071.2693614095752828No Hit
GTGCGCCGCGACCGGCTCCGGGACGGCTGGG3274371.2663833856898294No Hit
GCGCCGCGACCGGCTCCGGGACGGCTGGG3185891.23216318395153No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGC2851841.102967225648196No Hit
AACGATGCCGACCGGCGATGCGGCGGCG2641761.02171745190066No Hit
GGTGCGCCGCGACCGGCTCCGGGACGGCTGGG1801230.6966371380772763No Hit
GTGGGGGGGCCGGGCCACCCCTCCCACGGCG1711300.6618561396332745No Hit
CGCTTCTGGCGCCAAGCGCCCGGC1656510.6406657592847049No Hit
AGGGCGCACCACCGGCCCGTCTCGC1455780.5630321573980765No Hit
CGCTTCTGGCGCCAAGCGCCCGG1316170.5090371035476696No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATT1311540.50724642165291No Hit
CGGTGCGCCGCGACCGGCTCCGGGACGGCTGGG1248750.48296199051425903No Hit
CACTCGCCGAATCCCGGGGCCGAGGG1234360.47739656665560026No Hit
AAACGATGCCGACCGGCGATGCGGCGGCG1175330.4545663393882876No Hit
CTCGCTTCTGGCGCCAAGCGCCCGG1089040.4211931340537728No Hit
CGAGGGCGCACCACCGGCCCGTCTCG1081940.41844716397757553No Hit
CACTCGCCGAATCCCGGGGCCGAGGGAGCGAG1076390.41630066624195666No Hit
CACTCGCCGAATCCCGGGGCCGAGGGA1007660.38971890239167034No Hit
ACTCGCCGAATCCCGGGGCCGAGGGAG975270.37719186425532847No Hit
TCGCTTCTGGCGCCAAGCGCCCGGC905380.3501614630404804No Hit
TGGGGGGGCCGGGCCACCCCTCCCACGGCG806440.31189578989414946No Hit
ACTCGCCGAATCCCGGGGCCGAGGGAGCG773330.2990902871867003No Hit
ACGATGCCGACCGGCGATGCGGCGGCG716610.2771534670850236No Hit
GAGGGCGCACCACCGGCCCGTCTCG682930.26412751325878114No Hit
ACCGCCTGGGAATACCGGGTGCTGTAGGCTT680750.263284384418484No Hit
GCCGCGACCGGCTCCGGGACGGCTGGG651690.2520452449235135No Hit
CGAGGGCGCACCACCGGCCCGTCTCGC610050.23594071056114016No Hit
CGCCGCGACCGGCTCCGGGACGGCTGGGA602240.23292014347732326No Hit
TCCGCCCGGAGGATTCAACCCGGCGGCGGG553370.21401936071341385No Hit
ATTGATCATCGACACTTCGAACG536770.20759920532399506No Hit
GCCGAGGGCGCACCACCGGCCCGTCTCGC513290.19851816625510635No Hit
ACTCGCCGAATCCCGGGGCCGAGGGAGCGA507300.19620149572603293No Hit
CGCCGAGGGCGCACCACCGGCCCGTCTC490910.18986255916985378No Hit
TAAACGATGCCGACCGGCGATGCGGCGGCG455330.17610176828096705No Hit
GCACTCGCCGAATCCCGGGGCCGAGGGAGCGA428520.16573283057070695No Hit
GGGAGAGCGACGCTCAGACAGG416170.16095638966351888No Hit
GCGCCGCGACCGGCTCCGGGACGGCTGGGA409640.15843087070611497No Hit
GTGCGCCGCGACCGGCTCCGGGACGGCTGG402160.15553793321738893No Hit
ACTCGCCGAATCCCGGGGCCGAGGGAGC395480.15295440080767103No Hit
AAACCTGCATTAAAAATTTCGGTTGGG366730.1418351557808162No Hit
TGCGCCGCGACCGGCTCCGGGACGGCTGGGA364240.14087213247240338No Hit
CGGTGCGCCGCGACCGGCTCCGGGACGGCTGG363050.14041189241737878No Hit
GGCGGTGCGCCGCGACCGGCTCCGGGACGGCTGGG343430.1328237328547043No Hit
TTTTCACTGACCCGGTGAGGCGGGG339070.13113747517410995No Hit
GGTGCGCCGCGACCGGCTCCGGGACGGCTGG333930.12914954754148272No Hit
CTCGCTTCTGGCGCCAAGCGCCCGGC331590.12824453768538394No Hit
CGACTGCATAATTTGTGGTAGTGGGG320300.12387805850788162No Hit
GCCGAGGGCGCACCACCGGCCCGTCTCG308940.11948450638596612No Hit
CAGTCCGCCCGGAGGATTCAACCCGGCGGCGGG286240.11070513726911033No Hit
ATTGATCATCGACACTTCGAACGCA277810.10744478124906211No Hit
GCACTCGCCGAATCCCGGGGCCGAGGGAGCG269980.10441647903827No Hit
TTGGTGACTCTAGATAACCTCG266580.10310150745248543No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)