FastQCFastQC Report
Sat 16 Sept 2023
SRR15513185.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR15513185.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences30525342
Total Bases870.4 Mbp
Sequences flagged as poor quality0
Sequence length1-51
%GC66

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AACGATGCCGACCGGCGATGCGGCGGCG20130306.594618989035405No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGC12633464.138679265247871No Hit
AAACGATGCCGACCGGCGATGCGGCGGCG9989363.2724809438662477No Hit
GTGGGGGGGCCGGGCCACCCCTCCCACGGCG8244362.7008247770000415No Hit
AGTCCGCCCGGAGGATTCAACCCGGCGGCGGG6861712.2478732588810963No Hit
TAAACGATGCCGACCGGCGATGCGGCGGCG5332221.74681744761451No Hit
ACGATGCCGACCGGCGATGCGGCGGCG4391551.4386571000580435No Hit
TGGGGGGGCCGGGCCACCCCTCCCACGGCG3723071.2196652866329882No Hit
TCGCTTCTGGCGCCAAGCGCCCGG3615391.1843896785824708No Hit
AAAACGATGCCGACCGGCGATGCGGCGGCG3112691.0197068389929915No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATT3099961.0155365335464546No Hit
CGCCGAGGGCGCACCACCGGCCCGTCTCGC3058801.0020526551348712No Hit
GTGGGGGGGCCGGGCCACCCCTCCCACGGCGC2922720.957473302019024No Hit
GAGGGCGCACCACCGGCCCGTCTCGC2851850.9342565269211398No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCG2691890.8818541656306421No Hit
CACTCGCCGAATCCCGGGGCCGAGGGAGCG2132010.6984393491807561No Hit
AACGATGCCGACCGGCGATGCGGCGGC1686200.5523934834210866No Hit
GTCCGCCCGGAGGATTCAACCCGGCGGCGGG1453930.47630260784629375No Hit
TGGGGGGGCCGGGCCACCCCTCCCACGGCGC1391140.4557328137388272No Hit
CTCGCTTCTGGCGCCAAGCGCCCGG1372930.44976727861067045No Hit
CGCTTCTGGCGCCAAGCGCCCGG1287400.42174793651779563No Hit
CACTCGCCGAATCCCGGGGCCGAGGGAGCGA1159280.3797762527934986No Hit
CGCTTCTGGCGCCAAGCGCCCGGC1159030.37969435362919113No Hit
TCGCTTCTGGCGCCAAGCGCCCGGC1119750.3668263569332No Hit
ATAAACGATGCCGACCGGCGATGCGGCGGCG1082720.35469545271597613No Hit
CGACTGCATAATTTGTGGTAGTGGGGG1044850.34228936730667914No Hit
GACTGCATAATTTGTGGTAGTGGGG1012580.3317178231778697No Hit
CGACTGCATAATTTGTGGTAGTGGGG935540.30647977670487686No Hit
ACGATGCCGACCGGCGATGCGGCGGC874040.28633258228523695No Hit
ACCGCCTGGGAATACCGGGTGCTGTAGGCTT860010.28173640118430127No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATTG769710.2521544230364397No Hit
GACTGCATAATTTGTGGTAGTGGGGG769340.25203321227326464No Hit
CACTCGCCGAATCCCGGGGCCGAGGGAG768620.25179734268005904No Hit
GTGCGCCGCGACCGGCTCCGGGACGGCTGGG763150.25000538896501145No Hit
CACTCGCCGAATCCCGGGGCCGAGGGAGC702780.2302283787680413No Hit
CGATGCCGACCGGCGATGCGGCGGCG682780.22367644562344297No Hit
CTCGCTTCTGGCGCCAAGCGCCCGGCCG640580.20985186668834047No Hit
CCGGCCGAGGTGGGATCCCGAGGCC619520.2029526810870784No Hit
GCCGAGGGCGCACCACCGGCCCGTCTCGC618370.202575944931264No Hit
CGACTGCATAATTTGTGGTAGTGGGGGA598490.19606332338553326No Hit
CGAGGGCGCACCACCGGCCCGTCTCGC590420.1934196183616878No Hit
TGCGCCGCGACCGGCTCCGGGACGGCTGGG590070.19330495953165736No Hit
TCGACTGCATAATTTGTGGTAGTGGGGG579460.1898291589984479No Hit
GCCGGCCGAGGTGGGATCCCGAGGCC576500.18885947289304736No Hit
GTCTAGGGGTATGATTCTCGCTT576310.18879722952817368No Hit
AACGATGCCGACCGGCGATGCGGCGGCGT575990.1886923985978601No Hit
GGTGCGCCGCGACCGGCTCCGGGACGGCTGGG560290.18354913107935042No Hit
GTGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGC490790.16078116340187115No Hit
AAACGATGCCGACCGGCGATGCGGCGGC476360.15605394363804342No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTC454740.14897130390873262No Hit
GTGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACC447630.1466420916758279No Hit
CGCCGCGACCGGCTCCGGGACGGCTGGG446810.14637346241689939No Hit
TCCGCCGAGGGCGCACCACCGGCCCGTCTCGC443550.14530549731432985No Hit
TCGACTGCATAATTTGTGGTAGTGGGGGA439690.14404097421742237No Hit
GCCCGGCTAGCTCAGTCGGTAGAGCATGAGA433430.14199021914316307No Hit
CACTCGCCGAATCCCGGGGCCGAGGGAGCGAG432950.14183297274769274No Hit
CTCGCTTCTGGCGCCAAGCGCCCGGC428760.14046034275389938No Hit
AGTCCGCCCGGAGGATTCAACCCGGCGGCGG421990.13824251338445281No Hit
AACGATGCCGACCGGCGATGCGGCGGCGTT414350.13573967492321626No Hit
GCGCGCGGGTCGGGGGGCGGGGCGGACTGT409300.1340853118042052No Hit
ACTCGCCGAATCCCGGGGCCGAGGGAGCG399710.13094365986137027No Hit
CAGTCCGCCCGGAGGATTCAACCCGGCGGCGGG382380.1252664097915758No Hit
GCGCCGCGACCGGCTCCGGGACGGCTGGG381000.12481432640459851No Hit
TCGACTGCATAATTTGTGGTAGTGGGG379570.12434586318475972No Hit
TTGAACCCCATTCGTGATGGGGATCGGGGATT375020.12285529839436361No Hit
CGGTGCGCCGCGACCGGCTCCGGGACGGCTGGG372510.12203303078471653No Hit
CGCCGAGGGCGCACCACCGGCCCGTCTCG371380.1216628465620467No Hit
ACTGCATAATTTGTGGTAGTGGGGG354950.11628043348375916No Hit
TCCGCCGAGGGCGCACCACCGGCCCGTCTCG351530.11516005291603285No Hit
GACTGCATAATTTGTGGTAGTGGGGGA351050.1150028065205625No Hit
ACTGCATAATTTGTGGTAGTGGGG350440.11480297255965224No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCC345440.11316498927350264No Hit
ATTGATCATCGACACTTCGAACGCA344610.11289308404800183No Hit
GTCTAGCGGTTAGGATTCCTGG341990.11203478080605944No Hit
ACCCCTCCCACGGCGCGACCGC336430.1102133433918611No Hit
GCCCGGCTAGCTCAGTCGGTAGAGCATGGGA328320.10755653450172646No Hit
AGGGCGCACCACCGGCCCGTCTCGC318010.10417901296568602No Hit
CAGTGCGCCCCGGGCGGGTCGCGCCGTCGGG317430.10398900690449266No Hit
AAACGATGCCGACCGGCGATGCGGCGGCGT308850.10117822758545997No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)