FastQCFastQC Report
Sat 16 Sept 2023
SRR15513186.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR15513186.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences33580026
Total Bases959.9 Mbp
Sequences flagged as poor quality0
Sequence length1-51
%GC65

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCGCCGAGGGCGCACCACCGGCCCGTCTCGC11716643.489169424705031No Hit
AACGATGCCGACCGGCGATGCGGCGGCG9959282.965834511265715No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATT6503751.9367912341699793No Hit
GTGGGGGGGCCGGGCCACCCCTCCCACGGCG6175311.8389830907218476No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCG5943751.7700254311893624No Hit
CACTCGCCGAATCCCGGGGCCGAGGGAGCG5738771.7089831913769216No Hit
AGTCCGCCCGGAGGATTCAACCCGGCGGCGGG5667731.6878277580845233No Hit
CACTCGCCGAATCCCGGGGCCGAGGGAGCGA4706001.401428337190686No Hit
AAACGATGCCGACCGGCGATGCGGCGGCG4352941.2962884543329418No Hit
ACCGCCTGGGAATACCGGGTGCTGTAGGCTT4261931.269186033387824No Hit
CGCCGAGGGCGCACCACCGGCCCGTCTCGC3996761.1902194477157342No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCTGA3047550.9075484337028209No Hit
TGGGGGGGCCGGGCCACCCCTCCCACGGCG2606000.7760565760133717No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCC2569500.7651870192119565No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCC2278540.6785402727204559No Hit
TAAACGATGCCGACCGGCGATGCGGCGGCG2089290.6221823651953099No Hit
CTCGCTTCTGGCGCCAAGCGCCCGG1950490.5808482697422569No Hit
GTGGGGGGGCCGGGCCACCCCTCCCACGGCGC1782750.5308959558280271No Hit
CACTCGCCGAATCCCGGGGCCGAGGGAGC1705480.5078852529774693No Hit
GTCCGCCCGGAGGATTCAACCCGGCGGCGGG1647560.49063690421204553No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCTG1644750.48980009723637496No Hit
GTCTAACACGTGCGCGAGTCGGGG1495810.4454463495650658No Hit
CTAAACCATTCGTAGACGACCTGCTT1472670.43855534834904536No Hit
GTGCGCCGCGACCGGCTCCGGGACGGCTGGG1370000.4079806251490097No Hit
CTCGCTTCTGGCGCCAAGCGCCCGGC1355160.40356133137002337No Hit
CTCGCTTCTGGCGCCAAGCGCCCGGCCG1306370.3890318607853371No Hit
GGTGCGCCGCGACCGGCTCCGGGACGGCTGGG1223750.3644279489241611No Hit
ACGATGCCGACCGGCGATGCGGCGGCG1163050.34635172706536915No Hit
CACTCGCCGAATCCCGGGGCCGAGGGAGCGAG1127840.33586632720296283No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATTG1112260.3312266643271807No Hit
CACTCGCCGAATCCCGGGGCCGAGGGAG1094410.3259110043571735No Hit
TCGCTTCTGGCGCCAAGCGCCCGGC1067400.31786753232412623No Hit
TTGAACCCCATTCGTGATGGGGATCGGGGATT1053900.3138472852879864No Hit
AGTCTAACACGTGCGCGAGTCGGGG993300.2958008430368696No Hit
TGCGCCGCGACCGGCTCCGGGACGGCTGGG966360.2877782167291949No Hit
GCGACCTCAGATCAGACGTGGCGACCCGCTGA906060.2698211133011035No Hit
ACTCGCCGAATCCCGGGGCCGAGGGAGCG884990.26354654996395777No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGC884130.2632904453379518No Hit
CGGTGCGCCGCGACCGGCTCCGGGACGGCTGGG847720.25244769018344415No Hit
TGGGGGGGCCGGGCCACCCCTCCCACGGCGC831460.24760552597547125No Hit
GACTGCATAATTTGTGGTAGTGGGG821100.24452035862032986No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGC814980.2426978466306131No Hit
CGACTGCATAATTTGTGGTAGTGGGGG814460.2425429926707025No Hit
CGACTGCATAATTTGTGGTAGTGGGG802020.23883840947591883No Hit
CTAACACGTGCGCGAGTCGGGG783900.23344234456518886No Hit
TCTAACACGTGCGCGAGTCGGGG742620.22114932251690336No Hit
CGCCGAGGGCGCACCACCGGCCCGTCTCG740800.22060733365721635No Hit
CAGTCCGCCCGGAGGATTCAACCCGGCGGCGGG702990.20934766399525717No Hit
ACTCGCCGAATCCCGGGGCCGAGGGAGCGA697450.20769787373005605No Hit
ATTGATCATCGACACTTCGAACGCA692150.2061195545232752No Hit
GCGCCGCGACCGGCTCCGGGACGGCTGGG684580.20386523822226937No Hit
TTTTCACTGACCCGGTGAGGCGGGG675130.20105106529697148No Hit
GCCGAGGGCGCACCACCGGCCCGTCTCGC669820.19946976812942313No Hit
ACGCCGGGTTAAGGCGCCCGATGCCGACGCTC665330.19813266374481067No Hit
ATTGATCATCGACACTTCGAACGCAC645570.19224821326820893No Hit
GCACTCGCCGAATCCCGGGGCCGAGGGAGCGA617110.18377293692387256No Hit
ATAAACGATGCCGACCGGCGATGCGGCGGCG586490.17465442105375378No Hit
TCCGCCGAGGGCGCACCACCGGCCCGTCTCG568040.16916008343769595No Hit
TCGCTTCTGGCGCCAAGCGCCCGG567670.16904989888929806No Hit
AGCGAGCGCACGGGGTCGGCGGCGA565490.16840070344198066No Hit
AACGATGCCGACCGGCGATGCGGCGGC551810.16432685311202558No Hit
GACTGCATAATTTGTGGTAGTGGGGG546570.16276640166984982No Hit
TGGGGGGCCCAAGTCCTTCTGATCGAGGCC537760.1601428182336726No Hit
TTTCACTGACCCGGTGAGGCGGGG532270.15850791777230905No Hit
TCGACTGCATAATTTGTGGTAGTGGGGG528320.1573316232691422No Hit
AGCACTCGCCGAATCCCGGGGCCGAGGGAGCGA521510.15530363198646718No Hit
TTCACTGACCCGGTGAGGCGGGG513400.15288850580401575No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCT506410.15080691122752557No Hit
GACCGCCTGGGAATACCGGGTGCTGTAGGCTT505690.15059249805226474No Hit
AGTCCGCCCGGAGGATTCAACCCGGCGGCGG501480.14933877656914263No Hit
CGGGGCGCGGGACATGTGGCGTACGGAAG489080.14564610521742896No Hit
AGCACTCGCCGAATCCCGGGGCCGAGGGAGCG486580.1449016150255512No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTC482170.14358833432707882No Hit
GTCTAACACGTGCGCGAGTCGGG473140.1408992357540164No Hit
TCGACTGCATAATTTGTGGTAGTGGGG470320.14005945081757828No Hit
GTGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGC462440.1377128177327796No Hit
CGCCGGGTTAAGGCGCCCGATGCCGACGCTC454800.13543765570640118No Hit
TTGATCATCGACACTTCGAACGCAC450650.13420180198788412No Hit
ACGCCGGGTTAAGGCGCCCGATGCCGACGCT448320.13350793712905404No Hit
CGTTGAACCCCATTCGTGATGGGGATCGGGGATT438650.13062824906687087No Hit
GAGGGCGCACCACCGGCCCGTCTCGC433860.1292018058592331No Hit
GCGACCTCAGATCAGACGTGGCGACCCGCTG433320.1290409959777875No Hit
ACCCCTCCCACGGCGCGACCGC427100.12718870438039565No Hit
CGAGGGCGCACCACCGGCCCGTCTCGC417730.12439835514123784No Hit
CCGCCTGGGAATACCGGGTGCTGTAGGCTT417550.12434475184742264No Hit
AAAACGATGCCGACCGGCGATGCGGCGGCG393620.11721849173076876No Hit
TTGATCATCGACACTTCGAACGCA390850.11639359659816821No Hit
CGTTGAACCCCATTCGTGATGGGGATCGGGGATTG385020.11465744547070927No Hit
AGTCTAACACGTGCGCGAGTCGGG384310.11444601025621601No Hit
GCACTCGCCGAATCCCGGGGCCGAGGGAGCG376610.11215298046523253No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCTGAA371110.11051510204310144No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCT361150.10754905311866048No Hit
TCGCTTCTGGCGCCAAGCGCCCGGCCG356970.10630426551784086No Hit
ACTCGCCGAATCCCGGGGCCGAGGGAGC352560.10499098481936851No Hit
CGACTGCATAATTTGTGGTAGTGGGGGA348210.10369557188550121No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)