FastQCFastQC Report
Sat 16 Sept 2023
SRR15513187.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR15513187.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences66664481
Total Bases1.9 Gbp
Sequences flagged as poor quality0
Sequence length1-51
%GC70

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGTCCGCCCGGAGGATTCAACCCGGCGGCGGG37464625.619877247675565No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGC37443745.616745144989578No Hit
GTGGGGGGGCCGGGCCACCCCTCCCACGGCG34756905.21370593134896No Hit
AACGATGCCGACCGGCGATGCGGCGGCG28530474.2797108103189165No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCG23387263.50820401646868No Hit
TGGGGGGGCCGGGCCACCCCTCCCACGGCG14955572.24340905016571No Hit
CGCCGAGGGCGCACCACCGGCCCGTCTCGC12800081.9200749496572245No Hit
GTCCGCCCGGAGGATTCAACCCGGCGGCGGG11095731.6644140678152133No Hit
AAACGATGCCGACCGGCGATGCGGCGGCG10411811.5618227043573625No Hit
GTGGGGGGGCCGGGCCACCCCTCCCACGGCGC9298611.394837229738577No Hit
CACTCGCCGAATCCCGGGGCCGAGGGAGCG7145101.071800138967556No Hit
CTCGCTTCTGGCGCCAAGCGCCCGG6112160.9168540590603264No Hit
ACGATGCCGACCGGCGATGCGGCGGCG5354910.8032628349720445No Hit
CTCGCTTCTGGCGCCAAGCGCCCGGC4946470.7419948263003803No Hit
CACTCGCCGAATCCCGGGGCCGAGGGAGCGA4827690.7241772421508839No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATT4798660.7198225993839208No Hit
CAGTCCGCCCGGAGGATTCAACCCGGCGGCGGG4679250.7019105121361404No Hit
TGGGGGGGCCGGGCCACCCCTCCCACGGCGC4378000.6567215306153812No Hit
TCGCTTCTGGCGCCAAGCGCCCGGC3904450.5856867017385166No Hit
GTGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGC3809230.5714032334550088No Hit
TAAACGATGCCGACCGGCGATGCGGCGGCG3745140.5617894182660779No Hit
TCGCTTCTGGCGCCAAGCGCCCGG3319210.4978978235801461No Hit
GAGGGCGCACCACCGGCCCGTCTCGC3066820.4600380823485298No Hit
CACTCGCCGAATCCCGGGGCCGAGGGAGC2875190.43129263992920003No Hit
ACCGCCTGGGAATACCGGGTGCTGTAGGCTT2859250.428901561537695No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCC2795350.4193162472831672No Hit
AGTCCGCCCGGAGGATTCAACCCGGCGGCGG2781480.41723567907173836No Hit
CGCCGAGGGCGCACCACCGGCCCGTCTCG2778800.41683366589173626No Hit
CACTCGCCGAATCCCGGGGCCGAGGGAG2722990.4084618914231103No Hit
GTGCGCCGCGACCGGCTCCGGGACGGCTGGG2693860.40409224816435607No Hit
TGCGCCGCGACCGGCTCCGGGACGGCTGGG2560540.3840935925084304No Hit
CTCGCTTCTGGCGCCAAGCGCCCGGCCG2089390.3134187754345526No Hit
GGTGCGCCGCGACCGGCTCCGGGACGGCTGGG2076410.3114717116000648No Hit
CGGTGCGCCGCGACCGGCTCCGGGACGGCTGGG2017830.30268442350882474No Hit
GCCGAGGGCGCACCACCGGCCCGTCTCGC2000760.30012383956008No Hit
CGACTGCATAATTTGTGGTAGTGGGGG1996910.29954632062612174No Hit
TCCGCCGAGGGCGCACCACCGGCCCGTCTCG1989930.2984992862991013No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCC1900410.2850708460476877No Hit
CGACTGCATAATTTGTGGTAGTGGGG1797880.2696908418142489No Hit
GCGCCGCGACCGGCTCCGGGACGGCTGGG1559790.23397617090876324No Hit
CGAGGGCGCACCACCGGCCCGTCTCGC1537730.23066706241964144No Hit
CAGTGCGCCCCGGGCGGGTCGCGCCGTCGGG1531580.22974453217448734No Hit
GACTGCATAATTTGTGGTAGTGGGG1520310.22805397674962774No Hit
AGTCCGCCCGGAGGATTCAACCCGGCGGCGGGT1499520.2249353745062532No Hit
GTCCGCCCGGAGGATTCAACCCGGCGGCGG1494480.22417934971998058No Hit
CACTCGCCGAATCCCGGGGCCGAGGGAGCGAG1462350.21935969170749264No Hit
TCGACTGCATAATTTGTGGTAGTGGGGG1369290.2054002340466732No Hit
TCCGCCCGGAGGATTCAACCCGGCGGCGGG1318170.19773198264305095No Hit
GTGGGGGGGCCGGGCCACCCCTCCCACGGC1227970.18420153904745767No Hit
TCCGCCGAGGGCGCACCACCGGCCCGTCTCGC1219880.1829879992615558No Hit
TCGACTGCATAATTTGTGGTAGTGGGG1174540.17618677628346047No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTC1160520.17408370733434497No Hit
GACTGCATAATTTGTGGTAGTGGGGG1084850.1627328351960019No Hit
GTGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCG1067770.16017075119807803No Hit
GTGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACC1025170.15378054169505948No Hit
CGCCGCGACCGGCTCCGGGACGGCTGGG1011450.15172247422131735No Hit
AAAACGATGCCGACCGGCGATGCGGCGGCG945910.14189115190141507No Hit
AACGATGCCGACCGGCGATGCGGCGGC931190.13968307950976172No Hit
CCGCGGCCCGGGTTCGATTCCCGGTCAGGG912090.13681798557765715No Hit
TTGAACCCCATTCGTGATGGGGATCGGGGATT909790.13647297426646132No Hit
CGACTGCATAATTTGTGGTAGTGGGGGA889130.13337387266241524No Hit
CTAAACCATTCGTAGACGACCTGCTT880360.1320583295323337No Hit
AACGATGCCGACCGGCGATGCGGCGGCGT857250.1285917158794051No Hit
CTCGCTTCTGGCGCCAAGCGCCCGGCC768360.11525777872627553No Hit
ATTGATCATCGACACTTCGAACGCA767610.11514527503784211No Hit
GACCTGGTATTGCAGTACCTCCAGG761220.11418674361238933No Hit
ACTCGCCGAATCCCGGGGCCGAGGGAGCG746770.11201917254857201No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATTG740190.1110321401887161No Hit
TGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGC729570.10943908796049878No Hit
ATAAACGATGCCGACCGGCGATGCGGCGGCG725530.1088330680921374No Hit
GCACTCGCCGAATCCCGGGGCCGAGGGAGCGA705530.10583296973391272No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGC702340.10535445404577588No Hit
TCGACTGCATAATTTGTGGTAGTGGGGGA701580.10524045030816334No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)