FastQCFastQC Report
Sat 16 Sept 2023
SRR15513189.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR15513189.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22821208
Total Bases654.1 Mbp
Sequences flagged as poor quality0
Sequence length1-51
%GC66

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGGGGGGGCCGGGCCACCCCTCCCACGGCG9579574.197661228099757No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGC7824543.4286265652545653No Hit
AACGATGCCGACCGGCGATGCGGCGGCG5549602.431773112098185No Hit
AGTCCGCCCGGAGGATTCAACCCGGCGGCGGG5453922.3898471982727645No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCG4285541.877876052836467No Hit
CACTCGCCGAATCCCGGGGCCGAGGGAGCG4194171.8378387331643444No Hit
TGGGGGGGCCGGGCCACCCCTCCCACGGCG3243391.421217492080174No Hit
CGCCGAGGGCGCACCACCGGCCCGTCTCGC2891531.2670363461916654No Hit
CACTCGCCGAATCCCGGGGCCGAGGGAGCGA2852721.2500302350340087No Hit
GTGGGGGGGCCGGGCCACCCCTCCCACGGCGC2740411.2008172398235886No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATT2590991.135343054583263No Hit
ACCGCCTGGGAATACCGGGTGCTGTAGGCTT2296051.0061036208074523No Hit
CTCGCTTCTGGCGCCAAGCGCCCGG2232760.9783706454101817No Hit
TCGCTTCTGGCGCCAAGCGCCCGG2127320.9321680079336728No Hit
AAACGATGCCGACCGGCGATGCGGCGGCG2105360.9225453797187249No Hit
GTCCGCCCGGAGGATTCAACCCGGCGGCGGG1662890.7286599377210882No Hit
GAGGGCGCACCACCGGCCCGTCTCGC1256950.5507815361921244No Hit
TCGCTTCTGGCGCCAAGCGCCCGGC1195480.5238460645904459No Hit
TGGGGGGGCCGGGCCACCCCTCCCACGGCGC1060690.46478258293776564No Hit
CACTCGCCGAATCCCGGGGCCGAGGGAGC1051490.4607512450699367No Hit
CGACTGCATAATTTGTGGTAGTGGGGG1037860.45477873038096844No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCC986510.43227773043390166No Hit
ACGATGCCGACCGGCGATGCGGCGGCG976520.4279002233361179No Hit
CTCGCTTCTGGCGCCAAGCGCCCGGC895900.3925734343247737No Hit
TAAACGATGCCGACCGGCGATGCGGCGGCG889300.3896813875935051No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCTGA882480.38669293930452764No Hit
CACTCGCCGAATCCCGGGGCCGAGGGAG862220.3778152322173305No Hit
GTGCGCCGCGACCGGCTCCGGGACGGCTGGG809200.354582456809473No Hit
GACTGCATAATTTGTGGTAGTGGGG807020.353627205010357No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCC792510.34726908409055296No Hit
TCGACTGCATAATTTGTGGTAGTGGGGG787080.34488971837073656No Hit
GTGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGC737610.32321251355318265No Hit
CGACTGCATAATTTGTGGTAGTGGGG732570.32100404150385026No Hit
GACTGCATAATTTGTGGTAGTGGGGG701390.3073413116430997No Hit
CGGTGCGCCGCGACCGGCTCCGGGACGGCTGGG687020.3010445371691104No Hit
CACTCGCCGAATCCCGGGGCCGAGGGAGCGAG674610.2956066129365282No Hit
GGTGCGCCGCGACCGGCTCCGGGACGGCTGGG669740.2934726329999709No Hit
CAGTCCGCCCGGAGGATTCAACCCGGCGGCGGG635240.2783551159956125No Hit
ATTGATCATCGACACTTCGAACGCA634220.2779081633189619No Hit
TGCGCCGCGACCGGCTCCGGGACGGCTGGG631260.2766111241788778No Hit
TCCGCCGAGGGCGCACCACCGGCCCGTCTCG615200.26957381046612433No Hit
CTCGCTTCTGGCGCCAAGCGCCCGGCCG573680.251380207393053No Hit
CGCCGAGGGCGCACCACCGGCCCGTCTCG558550.24475040935606915No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATTG501120.21958522090504587No Hit
TCGACTGCATAATTTGTGGTAGTGGGG495570.21715327251738822No Hit
CGAGGGCGCACCACCGGCCCGTCTCGC476790.2089240850002331No Hit
GCCGAGGGCGCACCACCGGCCCGTCTCGC447650.19615526049278376No Hit
CGACTGCATAATTTGTGGTAGTGGGGGA426610.1869357660646185No Hit
CTAAACCATTCGTAGACGACCTGCTT421070.1845081995659476No Hit
GCGCCGCGACCGGCTCCGGGACGGCTGGG412580.18078797581617942No Hit
AGTCCGCCCGGAGGATTCAACCCGGCGGCGG402100.17619575615804386No Hit
TCGACTGCATAATTTGTGGTAGTGGGGGA375940.16473273456865212No Hit
TTGAACCCCATTCGTGATGGGGATCGGGGATT373040.16346198676248866No Hit
ACTCGCCGAATCCCGGGGCCGAGGGAGCG371380.16273459319068473No Hit
CTGCATAATTTGTGGTAGTGGGGG366190.1604603928065508No Hit
CAGTGCGCCCCGGGCGGGTCGCGCCGTCGGG362990.15905818833078425No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCTGAA360920.15815113731052274No Hit
CGCCGCGACCGGCTCCGGGACGGCTGGG343290.15042586702684627No Hit
CGCTTCTGGCGCCAAGCGCCCGGC343240.1504039575819124No Hit
ATTGATCATCGACACTTCGAACG336320.1473716904030672No Hit
ATTGATCATCGACACTTCGAACGCAC333930.14632441893522902No Hit
TTGATCATCGACACTTCGAACGCA332850.1458511749246578No Hit
AACGATGCCGACCGGCGATGCGGCGGC328840.1440940374409628No Hit
CGCTTCTGGCGCCAAGCGCCCGG316680.1387656604330498No Hit
GCACTCGCCGAATCCCGGGGCCGAGGGAGCGA312660.13700414106036807No Hit
TCCGCCGAGGGCGCACCACCGGCCCGTCTCGC295580.12951987467096396No Hit
ACTGCATAATTTGTGGTAGTGGGG293710.12870046143043787No Hit
ACTGCATAATTTGTGGTAGTGGGGG280490.1229076041899272No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGC273680.11992353778993645No Hit
GTGGGGGGGCCGGGCCACCCCTCCCACGGC273510.11984904567716136No Hit
GACCGCCTGGGAATACCGGGTGCTGTAGGCTT266550.11679925094236904No Hit
GTGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACC266130.11661521160492468No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGC265590.11637858959963907No Hit
AGCACTCGCCGAATCCCGGGGCCGAGGGAGCG262380.11497200323488573No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTC257760.11294757052299773No Hit
ACTCGCCGAATCCCGGGGCCGAGGGAGCGA257220.11271094851771211No Hit
GTCCGCCCGGAGGATTCAACCCGGCGGCGG243400.10665517793799523No Hit
AGCACTCGCCGAATCCCGGGGCCGAGGGAGCGA242440.10623451659526524No Hit
CCGCCTGGGAATACCGGGTGCTGTAGGCTT239660.10501635145694302No Hit
ATCGTATAGTGGTTAGTACTCTGC239440.10491994989923407No Hit
TGCATAATTTGTGGTAGTGGGGG238840.10465703656002785No Hit
GACTGCATAATTTGTGGTAGTGGGGGA238640.10456939878029244No Hit
CTAACACGTGCGCGAGTCGGGG237340.10399975321201227No Hit
AAAACGATGCCGACCGGCGATGCGGCGGCG234680.10283417074153131No Hit
GTGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCG232380.10182633627457408No Hit
CGTTGAACCCCATTCGTGATGGGGATCGGGGATTG230420.10096748603316703No Hit
GTCTAGGGGTATGATTCTCGCTT229200.10043289557678105No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)