FastQCFastQC Report
Sat 16 Sept 2023
SRR15513190.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR15513190.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences26920481
Total Bases777.5 Mbp
Sequences flagged as poor quality0
Sequence length1-51
%GC64

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGTCCGCCCGGAGGATTCAACCCGGCGGCGGG10484033.894443787984323No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGC8650943.213516132939824No Hit
CACTCGCCGAATCCCGGGGCCGAGGGAGCG7139572.6520960008106838No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCG6849232.5442450303915445No Hit
CACTCGCCGAATCCCGGGGCCGAGGGAGCGA5623492.0889262714139467No Hit
CTCGCTTCTGGCGCCAAGCGCCCGG4713131.7507599511316312No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATT4231171.5717289746791672No Hit
GTGGGGGGGCCGGGCCACCCCTCCCACGGCG3959671.4708763933304163No Hit
AACGATGCCGACCGGCGATGCGGCGGCG3722371.382727894052116No Hit
GTCCGCCCGGAGGATTCAACCCGGCGGCGGG3321371.2337706744541452No Hit
CGCCGAGGGCGCACCACCGGCCCGTCTCGC3015361.1200988570746564No Hit
TCGCTTCTGGCGCCAAGCGCCCGGC2117890.7867207127539809No Hit
TCGCTTCTGGCGCCAAGCGCCCGG1992990.7403248106896753No Hit
CTCGCTTCTGGCGCCAAGCGCCCGGC1956270.7266846383614022No Hit
AAACGATGCCGACCGGCGATGCGGCGGCG1676370.6227117561532426No Hit
GTGGGGGGGCCGGGCCACCCCTCCCACGGCGC1595730.5927568679029175No Hit
CAGTCCGCCCGGAGGATTCAACCCGGCGGCGGG1392270.5171787235153785No Hit
TCCGCCGAGGGCGCACCACCGGCCCGTCTCG1388320.5157114391826803No Hit
TGGGGGGGCCGGGCCACCCCTCCCACGGCG1358680.5047012347216233No Hit
CTCGCTTCTGGCGCCAAGCGCCCGGCCG1229190.4566003111162836No Hit
CACTCGCCGAATCCCGGGGCCGAGGGAGC1086360.4035440525746921No Hit
CGGTGCGCCGCGACCGGCTCCGGGACGGCTGGG930730.3457330498663824No Hit
GTGCGCCGCGACCGGCTCCGGGACGGCTGGG872890.32424754966302427No Hit
AGTCCGCCCGGAGGATTCAACCCGGCGGCGG798940.2967777581685855No Hit
ACCGCCTGGGAATACCGGGTGCTGTAGGCTT766450.28470888020165763No Hit
GCCGAGGGCGCACCACCGGCCCGTCTCGC766200.28461601410465137No Hit
GGTGCGCCGCGACCGGCTCCGGGACGGCTGGG744750.27664810298151804No Hit
ACTCGCCGAATCCCGGGGCCGAGGGAGCG736550.27360209499971416No Hit
CACTCGCCGAATCCCGGGGCCGAGGGAG736100.27343493602510294No Hit
TGCGCCGCGACCGGCTCCGGGACGGCTGGG732150.2719676516924048No Hit
CGCCGAGGGCGCACCACCGGCCCGTCTCG712800.2647798157841236No Hit
TGGGGGGGCCGGGCCACCCCTCCCACGGCGC707140.2626773273479029No Hit
TTGAACCCCATTCGTGATGGGGATCGGGGATT699500.2598393394233929No Hit
GAGGGCGCACCACCGGCCCGTCTCGC677870.2518045647104151No Hit
TAAACGATGCCGACCGGCGATGCGGCGGCG676280.25121393633345557No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATTG629840.23396313015358083No Hit
GACTGCATAATTTGTGGTAGTGGGGG618080.22959470895040843No Hit
CGACTGCATAATTTGTGGTAGTGGGGG585750.21758526528556457No Hit
ATTGATCATCGACACTTCGAACG558660.207522295013971No Hit
TCGACTGCATAATTTGTGGTAGTGGGGG546210.2028975633830614No Hit
ACGATGCCGACCGGCGATGCGGCGGCG536550.19930921739474122No Hit
GTGGGGGGGCCGGGCCACCCCTCCCACGGCGCGACCGC527730.1960329014923619No Hit
ATTGATCATCGACACTTCGAACGCA499970.18572105008079165No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCC497410.184770101247448No Hit
ACTCGCCGAATCCCGGGGCCGAGGGAGCGA489140.18169809075848237No Hit
AGTCCGCCCGGAGGATTCAACCCG465240.1728200918846881No Hit
CAGTGCGCCCCGGGCGGGTCGCGCCGTCGGG459530.1706990302290661No Hit
CACTCGCCGAATCCCGGGGCCGAGGGAGCGAG449930.16713297210402742No Hit
TCGACTGCATAATTTGTGGTAGTGGGG433920.16118582725174932No Hit
GCGCCGCGACCGGCTCCGGGACGGCTGGG419490.15582559613255054No Hit
CGAGGGCGCACCACCGGCCCGTCTCGC419460.15581445220090978No Hit
CGACTGCATAATTTGTGGTAGTGGGG412750.15332192615726295No Hit
GACTGCATAATTTGTGGTAGTGGGG404060.15009390062532688No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCC397420.14762737708884177No Hit
GTCCGCCCGGAGGATTCAACCCGGCGGCGG395100.14676557970862408No Hit
TCCGCCCGGAGGATTCAACCCGGCGGCGGG393430.14614523418062256No Hit
CTGCATAATTTGTGGTAGTGGGGG368820.13700349559133063No Hit
AGTCCGCCCGGAGGATTCAACCCGGCGGCGGGT361370.1342360859005454No Hit
AACGATGCCGACCGGCGATGCGGCGGC358950.1333371420815252No Hit
GTCCGCCGAGGGCGCACCACCGGCCCGTCTCG349060.1296633592839593No Hit
ACTGCATAATTTGTGGTAGTGGGGG348320.1293884756368209No Hit
AGTCCGCCGAGGGCGCACCACCGGCCCGTCTCG318850.11844142012172813No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCTGA305060.11331892621086524No Hit
TCCGCCGAGGGCGCACCACCGGCCCGTCTCGC302450.11234940415812036No Hit
GCCGAGGGCGCACCACCGGCCCGTCTCG297910.11066295583648747No Hit
CGCTTCTGGCGCCAAGCGCCCGG295100.1096191409061376No Hit
TCGCTTCTGGCGCCAAGCGCCCGGCCG294240.10929968153243622No Hit
GACCTGGTATTGCAGTACCTCCAGG281770.10466752061376616No Hit
TCTCGCTTCTGGCGCCAAGCGCCCGG272990.10140606328690784No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)