FastQCFastQC Report
Sat 16 Sept 2023
SRR15513212_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR15513212_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences72124139
Total Bases2.1 Gbp
Sequences flagged as poor quality0
Sequence length20-51
%GC64

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CACTCGCCGAATCCCGGGGCCGAGGGAGCG33703444.6729764080788545No Hit
GTGCGCCGCGACCGGCTCCGGGACGGCTGGG26315353.648618945731886No Hit
CACTCGCCGAATCCCGGGGCCGAGGGAGCGA22498093.1193564750908154No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCGC22112253.0658598226039135No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTCG20439032.833868145032553No Hit
ACCGCCTGGGAATACCGGGTGCTGTAGGCTT16178612.243161613340022No Hit
CGCCGAGGGCGCACCACCGGCCCGTCTCGC14680802.035490503394432No Hit
TAAACGATGCCGACCGGCGATGCGGCGGCG11262461.5615382250871654No Hit
GGTGCGCCGCGACCGGCTCCGGGACGGCTGGG7795161.080797650839201No Hit
TGCGCCGCGACCGGCTCCGGGACGGCTGGG7477041.0366903652049142No Hit
ACTCGCCGAATCCCGGGGCCGAGGGAGCG7125780.9879882240258009No Hit
ACTCGCCGAATCCCGGGGCCGAGGGAGCGA6791940.9417013629791823No Hit
AAACCTGCATTAAAAATTTCGGTTGGG6553470.9086375367337141No Hit
ATAAACGATGCCGACCGGCGATGCGGCGGCG5857430.8121317053088148No Hit
GTTGAACCCCATTCGTGATGGGGATCGGGGATT5853180.8115424435084071No Hit
AGTCCGCCCGGAGGATTCAACCCGGCGGCGGG4957260.6873232829857422No Hit
CACTCGCCGAATCCCGGGGCCGAGGGAGC4483040.6215727580470666No Hit
TGCGCCGCGACCGGCTCCGGGACGGCTGGGA4111090.5700019517737328No Hit
CACTCGCCGAATCCCGGGGCCGAGGGAGCGAG4078450.5654764211466011No Hit
CGGTGCGCCGCGACCGGCTCCGGGACGGCTGGG3694480.5122390438518787No Hit
TCGACTGCATAATTTGTGGTAGTGGGG3437700.47663653912041853No Hit
AAACGATGCCGACCGGCGATGCGGCGGCG3142870.4357584081523663No Hit
CGGTGCGCCGCGACCGGCTCCGGGACGGCTGG3042330.4218185537022494No Hit
CAGTCCGCCCGGAGGATTCAACCCGGCGGCGGG2444800.33897111756162523No Hit
CTCCCGGGGCTACGCCTGTCTGAGCGTCGCT2138680.29652762995201926No Hit
GCACTCGCCGAATCCCGGGGCCGAGGGAGCG2084390.28900033038869277No Hit
CGACTGCATAATTTGTGGTAGTGGGG2041680.28307859591918316No Hit
GTGCGCCGCGACCGGCTCCGGGACGGCTGGGA1964200.27233600667316116No Hit
GGTGCGCCGCGACCGGCTCCGGGACGGCTGG1803290.25002586166054613No Hit
AGCACTCGCCGAATCCCGGGGCCGAGGGAGC1767510.2450649705502897No Hit
TTGAACCCCATTCGTGATGGGGATCGGGGATT1732960.240274618737563No Hit
CAGTGCGCCCCGGGCGGGTCGCGCCGTCGGGC1661150.23031817405820262No Hit
CTCGACTGCATAATTTGTGGTAGTGGGG1598710.2216608783364471No Hit
AGCACTCGCCGAATCCCGGGGCCGAGGGAG1584220.21965184222164513No Hit
TCCCGGGGCTACGCCTGTCTGAGCGTCGCT1537410.21316164342703625No Hit
GCACTCGCCGAATCCCGGGGCCGAGGGAGC1493280.2070430261912728No Hit
GAGAGAGACGGGGAGGGCGGCGCCGCCGC1424610.1975219419950372No Hit
ACTCGCCGAATCCCGGGGCCGAGGGAGC1326600.18393287162845715No Hit
CAGTGCGCCCCGGGCGGGTCGCGCCGTCGGGCC1326080.18386077371405432No Hit
CCGCCGAGGGCGCACCACCGGCCCGTCTC1306200.18110441498649987No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCC1291500.17906626240626597No Hit
GTGGGGGGCCCAAGTCCTTCTGATCGAGGC1259970.17469463309641728No Hit
GACCGCCTGGGAATACCGGGTGCTGTAGGCTT1230180.1705642545001473No Hit
GTCCCCCGACCGGCGACCGGCCGCCGCCGGGCG1207510.1674210627318546No Hit
CGCCGAGGGCGCACCACCGGCCCGTCTCG1163230.16128164802078263No Hit
GCCGAGGGCGCACCACCGGCCCGTCTCGC1125270.15601850026937583No Hit
AACGATGCCGACCGGCGATGCGGCGGCG1008410.1398158805056931No Hit
AAAGCGGGTGAAAAGCCCGCTCGCCGGAAGAC988740.13708863824357057No Hit
GCACTCGCCGAATCCCGGGGCCGAGGGAGCGA980300.13591843363287845No Hit
AGGATTCAACCCGGCGGCGGGTCCGGCCGTG953240.13216656908722335No Hit
CACTCGCCGAATCCCGGGGCCGAGGGAGCGAGA941270.13050693055760432No Hit
ACGATTAAAGTCCTACGTGATCTGAGT934260.12953499521151995No Hit
AGTCCGCCCGGAGGATTCAACCCGGCGGCGGGT933950.12949201376254904No Hit
GCGCCGCGACCGGCTCCGGGACGGCTGGGAAG890050.12340528598892529No Hit
CAGTGCGCCCCGGGCGGGTCGCGCCGTCGGG889850.12337755602184729No Hit
GCGCCGCGACCGGCTCCGGGACGGCTGGGA842370.1167944618375271No Hit
GAGGGCGCACCACCGGCCCGTCTCGC828710.11490050508609884No Hit
TCGACTGCATAATTTGTGGTAGTGGGGG826490.11459270245153291No Hit
AACCTGCATTAAAAATTTCGGTTGGG817940.11340724635894787No Hit
TCCGCCGAGGGCGCACCACCGGCCCGTCTCG808500.11209839191286568No Hit
ACACCATGGGAGTGGGTTGCAAAAGAAGT746650.1035228995939903No Hit
CGACTGCATAATTTGTGGTAGTGGGGG744870.10327610288699599No Hit
ACGGAGTCAAGACCCGCAACGCGG740820.10271457105366624No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)