FastQCFastQC Report
Sat 16 Sept 2023
SRR15724844_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR15724844_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8257858
Total Bases627.5 Mbp
Sequences flagged as poor quality0
Sequence length76
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACTGTAGGCACCATCAATAG1885772.283606717383612No Hit
AGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACACTGTAGGCACCATCAAT1745132.113296208290334No Hit
AGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACCTGTAGGCACCATCAATA908131.099716173370867No Hit
TCGGGGGCGGGCGGGCGTCCCGCGCGTGTGGGGGGACTGTAGGCACCATC768110.9301564643034549No Hit
CGGGGGCGGGCGGGCGTCCCGCGCGTGTGGGGGGACTGTAGGCACCATCA598710.725018521752251No Hit
TAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACTGTAGGCACCATCAATA583390.7064664953066522No Hit
TAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACACTGTAGGCACCATCAA532450.6447797964072524No Hit
TCAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACTGTAGGCACCATCAAT511800.6197733116747708No Hit
CCCCCGCCCCTTGCCTCTCGGCGCCCCCTGTAGGCACCATCAATAGATCG396660.48034248106470223No Hit
ATGTACACGGAGTCGAGCTCAACCCGCAACGCGACTGTAGGCACCATCAA343990.4165608078995788No Hit
TCAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACACTGTAGGCACCATCA336170.40709103983139455No Hit
TCAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACCTGTAGGCACCATCAA305190.369575257893754No Hit
TAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACCTGTAGGCACCATCAAT283070.3427886505192993No Hit
ATGTACACGGAGTCGACCCGCAACGCGACTGTAGGCACCATCAATAGATC272500.329988721046063No Hit
CCGTCCCCGCTCGGCGGGGTCCCCGCGTCGCTGTAGGCACCATCAATAGA253020.30639906862045824No Hit
CCGTGGCGCAATGAAGGTGAAGGGCCCCCTGTAGGCACCATCAATAGATC252510.30578147505079406No Hit
TCGGCGGATCTTTCCCGCTCCCCGTTCCTCCCGACCCCTCTGTAGGCACC235840.28559464209726054No Hit
CCGGCGGATCTTTCCCGCTCCCCGTTCCTCCCGACCCCCTGTAGGCACCA235650.2853645582183661No Hit
CCGGCGGATCTTTCCCGCTCCCCGTTCCTCCCGACCCCTCTGTAGGCACC226950.2748291385005651No Hit
CGGGCGGGCGTCCCGCGCGTGTGGGGGGACTGTAGGCACCATCAATAGAT226840.27469593204436304No Hit
TCCCCGCCCCTTGCCTCTCGGCGCCCCCTGTAGGCACCATCAATAGATCG223280.2703848867345503No Hit
CCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTCTGTAGGCACCATCAATA211240.2558048346193408No Hit
CAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACTGTAGGCACCATCAATA206970.2506340021831327No Hit
TCGGCGGATCTTTCCCGCTCCCCGTTCCTCCCGACCCCCTGTAGGCACCA194730.2358117565111921No Hit
CCCCCGCCCCTTGCCTCTCGGCGCCCCTGTAGGCACCATCAATAGATCGG194330.23532736939773No Hit
CCGGTGGGGGGCGGGGCGGACTGTCTGTAGGCACCATCAATAGATCGGAA185580.22473140129074637No Hit
CCGGCGGATCTTTCCCGCTCCCCGTTCCTCCCGACCCCTGTAGGCACCAT181100.2193062656199707No Hit
CAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACACTGTAGGCACCATCAA151320.18324364502271653No Hit
TCACCGCCCGTCCCCGCCCCTTGCCTCTCGGCGCCCCTGTAGGCACCATC146530.17744310933900778No Hit
TCGGCGGATCTTTCCCGCTCCCCGTTCCTCCCGACCCCTGTAGGCACCAT135150.16366229596101073No Hit
CCGGGGGCCCGAGGTGGGATCCCGAGGCCTCTCTGTAGGCACCATCAATA132180.16006572164355454No Hit
CGGGGCCCGGTGGGGGGCGGGGCGGACTGTCTGTAGGCACCATCAATAGA129960.15737737316383982No Hit
CCGTCCCCGCTCGGCGGGGTCCCCGCGTCGTCTGTAGGCACCATCAATAG129220.15648125700393492No Hit
TCCCTGGTGGTCTAGTGGTTAGGATTCGCTGTAGGCACCATCAATAGATC128670.15581522472292453No Hit
CGGCGGATCTTTCCCGCTCCCCGTTCCTCCCGACCCCTCTGTAGGCACCA124020.1501842245289275No Hit
CCCCGCCCCTTGCCTCTCGGCGCCCCCTGTAGGCACCATCAATAGATCGG121950.14767752121676106No Hit
CCGGGGGCGGGCGGGCGTCCCGCGCGTGTGGGGGGACTGTAGGCACCATC115940.14039960483699282No Hit
CCGTCCCCGCTCGGCGGGGTCCCCGCGTCGTCCTGTAGGCACCATCAATA113170.13704522407626774No Hit
CAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACCTGTAGGCACCATCAAT110950.13435687559655302No Hit
GCGGGGGCGGGCGGGCGTCCCGCGCGTGTGGGGGGACTGTAGGCACCATC103470.12529883657481153No Hit
TCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTCTGTAGGCACCATCAAT102260.12383356555658864No Hit
TCCCCGCCCCTTGCCTCTCGGCGCCCCTGTAGGCACCATCAATAGATCGG98470.11924399765653514No Hit
CCGGTGGGGGGCGGGGCGGACTGTCCCTGTAGGCACCATCAATAGATCGG98380.11913501055600617No Hit
CGGCGGATCTTTCCCGCTCCCCGTTCCTCCCGACCCCCTGTAGGCACCAT97850.11849319763066887No Hit
TCACCGCCCGTCCCCGCCCCTTGCCTCTCGGCGCTGTAGGCACCATCAAT94420.11433957813273127No Hit
TCACCGCCCGTCCCCGCCCCTTGCCTCTCGGCCTGTAGGCACCATCAATA91200.11044026186936129No Hit
AGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACACCTGTAGGCACCATCAA89290.1081273134025797No Hit
TGGCCCGGTGGGGGGCGGGGCGGACTGTCCCTGTAGGCACCATCAATAGA88700.10741284241022309No Hit
TCGGGGCCCGGTGGGGGGCGGGGCGGACTGTCTGTAGGCACCATCAATAG88210.10681946819623199No Hit
CCGTGGCGCAATGAAGGTGAAGGGCCCCTGTAGGCACCATCAATAGATCG88180.10678313916272235No Hit
TCACCGCCCGTCCCCGCCCCTTGCCTCTCGGCGCCCCCTGTAGGCACCAT87110.10548740363421119No Hit
CCGGTGGGGGGCGGGGCGGACTGTCCTGTAGGCACCATCAATAGATCGGA83700.10135800349194671No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)