FastQCFastQC Report
Sat 16 Sept 2023
SRR15724856_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR15724856_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8114061
Total Bases616.6 Mbp
Sequences flagged as poor quality0
Sequence length76
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACTGTAGGCACCATCAATAG1756912.165265950058793No Hit
AGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACACTGTAGGCACCATCAAT1633652.013356813561052No Hit
AGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACCTGTAGGCACCATCAATA844471.0407488925705637No Hit
TCGGGGGCGGGCGGGCGTCCCGCGCGTGTGGGGGGACTGTAGGCACCATC748610.9226082968811795No Hit
CGGGGGCGGGCGGGCGTCCCGCGCGTGTGGGGGGACTGTAGGCACCATCA602690.7427723306492273No Hit
TAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACTGTAGGCACCATCAATA551010.6790804259420776No Hit
TAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACACTGTAGGCACCATCAA506950.6247796263794418No Hit
TCAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACTGTAGGCACCATCAAT478690.5899511970639609No Hit
CCCCCGCCCCTTGCCTCTCGGCGCCCCCTGTAGGCACCATCAATAGATCG399270.4920717258595912No Hit
ATGTACACGGAGTCGAGCTCAACCCGCAACGCGACTGTAGGCACCATCAA334840.4126663578200854No Hit
TCAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACACTGTAGGCACCATCA319610.3938964718160241No Hit
TCAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACCTGTAGGCACCATCAA287090.3538178971047913No Hit
CCGTCCCCGCTCGGCGGGGTCCCCGCGTCGCTGTAGGCACCATCAATAGA284450.35056428587362115No Hit
TAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACCTGTAGGCACCATCAAT267860.33011829711410845No Hit
ATGTACACGGAGTCGACCCGCAACGCGACTGTAGGCACCATCAATAGATC261600.3224032947250458No Hit
CCGTGGCGCAATGAAGGTGAAGGGCCCCCTGTAGGCACCATCAATAGATC248860.30670215567765635No Hit
CCGGCGGATCTTTCCCGCTCCCCGTTCCTCCCGACCCCCTGTAGGCACCA242650.29904877471342645No Hit
TCGGCGGATCTTTCCCGCTCCCCGTTCCTCCCGACCCCTCTGTAGGCACC239000.29455041070063437No Hit
CCGGCGGATCTTTCCCGCTCCCCGTTCCTCCCGACCCCTCTGTAGGCACC230840.28449379416792653No Hit
TCCCCGCCCCTTGCCTCTCGGCGCCCCCTGTAGGCACCATCAATAGATCG222240.2738949090966903No Hit
CGGGCGGGCGTCCCGCGCGTGTGGGGGGACTGTAGGCACCATCAATAGAT218840.26970465220806206No Hit
CCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTCTGTAGGCACCATCAATA204080.2515140075974287No Hit
TCGGCGGATCTTTCCCGCTCCCCGTTCCTCCCGACCCCCTGTAGGCACCA198710.24489586657038936No Hit
CCCCCGCCCCTTGCCTCTCGGCGCCCCTGTAGGCACCATCAATAGATCGG193840.2388939397916777No Hit
CAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACTGTAGGCACCATCAATA191350.23582519283500578No Hit
CCGGTGGGGGGCGGGGCGGACTGTCTGTAGGCACCATCAATAGATCGGAA183280.2258794948669969No Hit
CCGGCGGATCTTTCCCGCTCCCCGTTCCTCCCGACCCCTGTAGGCACCAT182950.22547279346310065No Hit
CCGTCCCCGCTCGGCGGGGTCCCCGCGTCGTCTGTAGGCACCATCAATAG167270.2061483146355444No Hit
TCACCGCCCGTCCCCGCCCCTTGCCTCTCGGCGCCCCTGTAGGCACCATC152940.18848761427847288No Hit
CAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACACTGTAGGCACCATCAA142460.17557176363352459No Hit
TCGGCGGATCTTTCCCGCTCCCCGTTCCTCCCGACCCCTGTAGGCACCAT136180.16783211267452883No Hit
CCGTCCCCGCTCGGCGGGGTCCCCGCGTCGTCCTGTAGGCACCATCAATA136100.1677335183947964No Hit
CCGGGGGCCCGAGGTGGGATCCCGAGGCCTCTCTGTAGGCACCATCAATA128520.15839171039014865No Hit
CGGCGGATCTTTCCCGCTCCCCGTTCCTCCCGACCCCTCTGTAGGCACCA126590.15601312339160378No Hit
CGGGGCCCGGTGGGGGGCGGGGCGGACTGTCTGTAGGCACCATCAATAGA125520.15469442490018254No Hit
TCCCTGGTGGTCTAGTGGTTAGGATTCGCTGTAGGCACCATCAATAGATC121610.14987562947826003No Hit
CCCCGCCCCTTGCCTCTCGGCGCCCCCTGTAGGCACCATCAATAGATCGG120710.1487664438312702No Hit
CCGGGGGCGGGCGGGCGTCCCGCGCGTGTGGGGGGACTGTAGGCACCATC114500.1411130628670403No Hit
CAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACCTGTAGGCACCATCAAT104030.12820953650705855No Hit
GCGGGGGCGGGCGGGCGTCCCGCGCGTGTGGGGGGACTGTAGGCACCATC102260.12602813806797855No Hit
CGGCGGATCTTTCCCGCTCCCCGTTCCTCCCGACCCCCTGTAGGCACCAT102190.12594186807321267No Hit
TCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTCTGTAGGCACCATCAAT100080.12334144394526982No Hit
CCGGTGGGGGGCGGGGCGGACTGTCCCTGTAGGCACCATCAATAGATCGG97290.11990296843960133No Hit
TCCCCGCCCCTTGCCTCTCGGCGCCCCTGTAGGCACCATCAATAGATCGG96260.11863356708804629No Hit
TCACCGCCCGTCCCCGCCCCTTGCCTCTCGGCGCTGTAGGCACCATCAAT95420.11759832715085579No Hit
TCACCGCCCGTCCCCGCCCCTTGCCTCTCGGCGCCCCCTGTAGGCACCAT91770.11309996313806367No Hit
TCACCGCCCGTCCCCGCCCCTTGCCTCTCGGCCTGTAGGCACCATCAATA91530.11280418029886638No Hit
TCGGGGCCCGGTGGGGGGCGGGGCGGACTGTCTGTAGGCACCATCAATAG88610.10920548908863267No Hit
TGGCCCGGTGGGGGGCGGGGCGGACTGTCCCTGTAGGCACCATCAATAGA85180.10497825934510475No Hit
CCGTGGCGCAATGAAGGTGAAGGGCCCCTGTAGGCACCATCAATAGATCG85170.1049659350601382No Hit
AGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACACCTGTAGGCACCATCAA85080.1048550164954392No Hit
CCGGTGGGGGGCGGGGCGGACTGTCCTGTAGGCACCATCAATAGATCGGA82020.10108378529567377No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)