FastQCFastQC Report
Sat 16 Sept 2023
SRR15724880_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR15724880_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8600952
Total Bases653.6 Mbp
Sequences flagged as poor quality0
Sequence length76
%GC57

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACTGTAGGCACCATCAATAG2029192.359262090987137No Hit
AGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACACTGTAGGCACCATCAAT1870102.174294194410107No Hit
AGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACCTGTAGGCACCATCAATA982091.1418387173884939No Hit
TCGGGGGCGGGCGGGCGTCCCGCGCGTGTGGGGGGACTGTAGGCACCATC828310.9630445559979871No Hit
CGGGGGCGGGCGGGCGTCCCGCGCGTGTGGGGGGACTGTAGGCACCATCA648270.7537188906530347No Hit
TAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACTGTAGGCACCATCAATA623400.7248034868698257No Hit
TAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACACTGTAGGCACCATCAA569940.6626475766868598No Hit
TCAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACTGTAGGCACCATCAAT545390.6341042247416333No Hit
CCCCCGCCCCTTGCCTCTCGGCGCCCCCTGTAGGCACCATCAATAGATCG457850.532324793813522No Hit
ATGTACACGGAGTCGAGCTCAACCCGCAACGCGACTGTAGGCACCATCAA360160.41874434364940066No Hit
TCAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACACTGTAGGCACCATCA357960.41618648726327045No Hit
CCGTCCCCGCTCGGCGGGGTCCCCGCGTCGCTGTAGGCACCATCAATAGA331390.3852945580907788No Hit
TCAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACCTGTAGGCACCATCAA322730.375225905225375No Hit
TAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACCTGTAGGCACCATCAAT304130.3536003921426373No Hit
ATGTACACGGAGTCGACCCGCAACGCGACTGTAGGCACCATCAATAGATC286240.33280036907542326No Hit
CCGGCGGATCTTTCCCGCTCCCCGTTCCTCCCGACCCCCTGTAGGCACCA279420.3248710142784194No Hit
CCGTGGCGCAATGAAGGTGAAGGGCCCCCTGTAGGCACCATCAATAGATC267310.31079117753476593No Hit
TCGGCGGATCTTTCCCGCTCCCCGTTCCTCCCGACCCCTCTGTAGGCACC262150.3047918416472967No Hit
TCCCCGCCCCTTGCCTCTCGGCGCCCCCTGTAGGCACCATCAATAGATCG257300.29915293097787315No Hit
CCGGCGGATCTTTCCCGCTCCCCGTTCCTCCCGACCCCTCTGTAGGCACC251130.2919793064767714No Hit
CGGGCGGGCGTCCCGCGCGTGTGGGGGGACTGTAGGCACCATCAATAGAT239050.2779343495929288No Hit
TCGGCGGATCTTTCCCGCTCCCCGTTCCTCCCGACCCCCTGTAGGCACCA235040.27327207499820955No Hit
CCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTCTGTAGGCACCATCAATA219190.25484388239813455No Hit
CAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACTGTAGGCACCATCAATA217520.2529022368686629No Hit
CCCCCGCCCCTTGCCTCTCGGCGCCCCTGTAGGCACCATCAATAGATCGG216890.2521697598126347No Hit
CCGTCCCCGCTCGGCGGGGTCCCCGCGTCGTCTGTAGGCACCATCAATAG202570.23552044006291398No Hit
CCGGTGGGGGGCGGGGCGGACTGTCTGTAGGCACCATCAATAGATCGGAA202460.23539254724360745No Hit
CCGGCGGATCTTTCCCGCTCCCCGTTCCTCCCGACCCCTGTAGGCACCAT200020.23255565197899025No Hit
TCACCGCCCGTCCCCGCCCCTTGCCTCTCGGCGCCCCTGTAGGCACCATC171910.19987322333620744No Hit
CCGTCCCCGCTCGGCGGGGTCCCCGCGTCGTCCTGTAGGCACCATCAATA163560.19016499568884931No Hit
CAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACACTGTAGGCACCATCAA160750.18689791548656473No Hit
TCGGCGGATCTTTCCCGCTCCCCGTTCCTCCCGACCCCTGTAGGCACCAT147410.17138800449066569No Hit
CGGCGGATCTTTCCCGCTCCCCGTTCCTCCCGACCCCTCTGTAGGCACCA142340.16549330818262908No Hit
CCGGGGGCCCGAGGTGGGATCCCGAGGCCTCTCTGTAGGCACCATCAATA142270.1654119218430704No Hit
CGGGGCCCGGTGGGGGGCGGGGCGGACTGTCTGTAGGCACCATCAATAGA141290.16427251308924873No Hit
CCCCGCCCCTTGCCTCTCGGCGCCCCCTGTAGGCACCATCAATAGATCGG134410.15627339857262312No Hit
TCCCTGGTGGTCTAGTGGTTAGGATTCGCTGTAGGCACCATCAATAGATC132530.15408759402447544No Hit
CCGGGGGCGGGCGGGCGTCCCGCGCGTGTGGGGGGACTGTAGGCACCATC125300.14568154781005638No Hit
CAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACCTGTAGGCACCATCAAT117900.13707784905670906No Hit
CGGCGGATCTTTCCCGCTCCCCGTTCCTCCCGACCCCCTGTAGGCACCAT116630.13560126832471567No Hit
TCACCGCCCGTCCCCGCCCCTTGCCTCTCGGCGCCCCCTGTAGGCACCAT113020.13140405852747464No Hit
GCGGGGGCGGGCGGGCGTCCCGCGCGTGTGGGGGGACTGTAGGCACCATC111570.12971819863661604No Hit
TCCCCGCCCCTTGCCTCTCGGCGCCCCTGTAGGCACCATCAATAGATCGG109360.1271487156305488No Hit
TCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTCTGTAGGCACCATCAAT109140.12689292999193577No Hit
CCGGTGGGGGGCGGGGCGGACTGTCCCTGTAGGCACCATCAATAGATCGG108110.12569538813842934No Hit
TCACCGCCCGTCCCCGCCCCTTGCCTCTCGGCGCTGTAGGCACCATCAAT104960.12203300285828825No Hit
TCACCGCCCGTCCCCGCCCCTTGCCTCTCGGCCTGTAGGCACCATCAATA100090.11637083894899077No Hit
TCGGGGCCCGGTGGGGGGCGGGGCGGACTGTCTGTAGGCACCATCAATAG98800.11487100497712346No Hit
AGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACACCTGTAGGCACCATCAA95540.11108072687767585No Hit
CCGTGGCGCAATGAAGGTGAAGGGCCCCTGTAGGCACCATCAATAGATCG94870.11030174334189984No Hit
TGGCCCGGTGGGGGGCGGGGCGGACTGTCCCTGTAGGCACCATCAATAGA94410.10976691882479987No Hit
CGGTGGGGGGCGGGGCGGACTGTCTGTAGGCACCATCAATAGATCGGAAG93800.10905769500864555No Hit
CCGGTGGGGGGCGGGGCGGACTGTCCTGTAGGCACCATCAATAGATCGGA90660.10540693634844144No Hit
GGGGCCCGGTGGGGGGCGGGGCGGACTGTCTGTAGGCACCATCAATAGAT88790.10323275842023069No Hit
CCAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACTGTAGGCACCATCAAT87270.10146551218981341No Hit
CCAACTTCTTAGAGGGACAAGTGGCGTTCTGTAGGCACCATCAATAGATC86330.10037260991573956No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)