FastQCFastQC Report
Sat 16 Sept 2023
SRR15724892_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR15724892_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8611597
Total Bases654.4 Mbp
Sequences flagged as poor quality0
Sequence length76
%GC57

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACTGTAGGCACCATCAATAG1931252.242615394101698No Hit
AGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACACTGTAGGCACCATCAAT1784492.072194042521962No Hit
AGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACCTGTAGGCACCATCAATA934371.085013615941387No Hit
TCGGGGGCGGGCGGGCGTCCCGCGCGTGTGGGGGGACTGTAGGCACCATC828160.9616799299827896No Hit
CGGGGGCGGGCGGGCGTCCCGCGCGTGTGGGGGGACTGTAGGCACCATCA644870.748839036476045No Hit
TAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACTGTAGGCACCATCAATA614360.7134100678422364No Hit
TAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACACTGTAGGCACCATCAA558870.648973703716047No Hit
TCAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACTGTAGGCACCATCAAT537700.6243905747098941No Hit
CCCCCGCCCCTTGCCTCTCGGCGCCCCCTGTAGGCACCATCAATAGATCG459960.5341169587940542No Hit
TCAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACACTGTAGGCACCATCA354940.41216513034690316No Hit
ATGTACACGGAGTCGAGCTCAACCCGCAACGCGACTGTAGGCACCATCAA352950.40985429299582876No Hit
CCGTCCCCGCTCGGCGGGGTCCCCGCGTCGCTGTAGGCACCATCAATAGA344560.40011161692773123No Hit
TCAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACCTGTAGGCACCATCAA321220.3730086301065877No Hit
TAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACCTGTAGGCACCATCAAT300500.34894805226022535No Hit
CCGGCGGATCTTTCCCGCTCCCCGTTCCTCCCGACCCCCTGTAGGCACCA285400.331413557787249No Hit
ATGTACACGGAGTCGACCCGCAACGCGACTGTAGGCACCATCAATAGATC276470.3210438203274027No Hit
CCGTGGCGCAATGAAGGTGAAGGGCCCCCTGTAGGCACCATCAATAGATC273650.3177691663927144No Hit
TCGGCGGATCTTTCCCGCTCCCCGTTCCTCCCGACCCCTCTGTAGGCACC270070.31361198161037956No Hit
CCGGCGGATCTTTCCCGCTCCCCGTTCCTCCCGACCCCTCTGTAGGCACC258350.30000242695983104No Hit
TCCCCGCCCCTTGCCTCTCGGCGCCCCCTGTAGGCACCATCAATAGATCG248810.28892434237226844No Hit
TCGGCGGATCTTTCCCGCTCCCCGTTCCTCCCGACCCCCTGTAGGCACCA235590.2735729505224176No Hit
CGGGCGGGCGTCCCGCGCGTGTGGGGGGACTGTAGGCACCATCAATAGAT235160.2730736238586176No Hit
CCGTCCCCGCTCGGCGGGGTCCCCGCGTCGTCTGTAGGCACCATCAATAG221300.2569790481370645No Hit
CCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTCTGTAGGCACCATCAATA218700.25395986365827383No Hit
CAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACTGTAGGCACCATCAATA218490.2537160064503715No Hit
CCGGTGGGGGGCGGGGCGGACTGTCTGTAGGCACCATCAATAGATCGGAA215650.2504181280196925No Hit
CCCCCGCCCCTTGCCTCTCGGCGCCCCTGTAGGCACCATCAATAGATCGG214480.24905949500423674No Hit
CCGGCGGATCTTTCCCGCTCCCCGTTCCTCCCGACCCCTGTAGGCACCAT205320.2384226758404974No Hit
CCGTCCCCGCTCGGCGGGGTCCCCGCGTCGTCCTGTAGGCACCATCAATA175050.2032724011585772No Hit
TCACCGCCCGTCCCCGCCCCTTGCCTCTCGGCGCCCCTGTAGGCACCATC172670.20050868613568423No Hit
CAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACACTGTAGGCACCATCAA159360.18505278405387526No Hit
TCGGCGGATCTTTCCCGCTCCCCGTTCCTCCCGACCCCTGTAGGCACCAT151870.17635521030535917No Hit
CGGCGGATCTTTCCCGCTCCCCGTTCCTCCCGACCCCTCTGTAGGCACCA144540.16784343252476863No Hit
CGGGGCCCGGTGGGGGGCGGGGCGGACTGTCTGTAGGCACCATCAATAGA143000.16605514633348495No Hit
CCGGGGGCCCGAGGTGGGATCCCGAGGCCTCTCTGTAGGCACCATCAATA140170.1627688801508013No Hit
CCCCGCCCCTTGCCTCTCGGCGCCCCCTGTAGGCACCATCAATAGATCGG138790.1611663899274432No Hit
TCCCTGGTGGTCTAGTGGTTAGGATTCGCTGTAGGCACCATCAATAGATC135600.15746208281692697No Hit
CCGGGGGCGGGCGGGCGTCCCGCGCGTGTGGGGGGACTGTAGGCACCATC125580.1458266103255877No Hit
CGGCGGATCTTTCCCGCTCCCCGTTCCTCCCGACCCCCTGTAGGCACCAT120710.14017144555185293No Hit
CAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACCTGTAGGCACCATCAAT118370.13745417952094136No Hit
TCACCGCCCGTCCCCGCCCCTTGCCTCTCGGCGCCCCCTGTAGGCACCAT114970.1335060152025228No Hit
GCGGGGGCGGGCGGGCGTCCCGCGCGTGTGGGGGGACTGTAGGCACCATC113320.1315899942832903No Hit
CCGGTGGGGGGCGGGGCGGACTGTCCCTGTAGGCACCATCAATAGATCGG110800.12866370778846248No Hit
TCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTCTGTAGGCACCATCAAT108480.12596966625354158No Hit
TCACCGCCCGTCCCCGCCCCTTGCCTCTCGGCGCTGTAGGCACCATCAAT105980.12306660425470445No Hit
TCCCCGCCCCTTGCCTCTCGGCGCCCCTGTAGGCACCATCAATAGATCGG104550.1214060527913696No Hit
TCGGGGCCCGGTGGGGGGCGGGGCGGACTGTCTGTAGGCACCATCAATAG99570.11562315328968599No Hit
TCACCGCCCGTCCCCGCCCCTTGCCTCTCGGCCTGTAGGCACCATCAATA99350.11536768383378833No Hit
CCGGTGGGGGGCGGGGCGGACTGTCCTGTAGGCACCATCAATAGATCGGA96560.11212786664308606No Hit
CGGTGGGGGGCGGGGCGGACTGTCTGTAGGCACCATCAATAGATCGGAAG95230.11058343765970469No Hit
CCGTGGCGCAATGAAGGTGAAGGGCCCCTGTAGGCACCATCAATAGATCG94680.10994476401996053No Hit
AGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACACCTGTAGGCACCATCAA94070.10923641689224427No Hit
TGGCCCGGTGGGGGGCGGGGCGGACTGTCCCTGTAGGCACCATCAATAGA94060.1092248046442489No Hit
GGGGCCCGGTGGGGGGCGGGGCGGACTGTCTGTAGGCACCATCAATAGAT89080.10344190514256532No Hit
CCAACTTCTTAGAGGGACAAGTGGCGTTCTGTAGGCACCATCAATAGATC88350.10259421103890486No Hit
CCAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACTGTAGGCACCATCAAT87890.10206004763111881No Hit
GTCTAGGGGTATGATTCTCGCTTCTGTAGGCACCATCAATAGATCGGAAG86550.10050400639974211No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)