FastQCFastQC Report
Sat 16 Sept 2023
SRR15724904_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR15724904_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8218166
Total Bases624.5 Mbp
Sequences flagged as poor quality0
Sequence length76
%GC57

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACTGTAGGCACCATCAATAG1861752.2654081214713844No Hit
AGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACACTGTAGGCACCATCAAT1736802.1133668996221298No Hit
AGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACCTGTAGGCACCATCAATA901971.0975319797628815No Hit
TCGGGGGCGGGCGGGCGTCCCGCGCGTGTGGGGGGACTGTAGGCACCATC765830.9318745812630215No Hit
CGGGGGCGGGCGGGCGTCCCGCGCGTGTGGGGGGACTGTAGGCACCATCA617410.7512746761260359No Hit
TAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACTGTAGGCACCATCAATA574030.6984891762955384No Hit
TAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACACTGTAGGCACCATCAA527430.6417855273305504No Hit
TCAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACTGTAGGCACCATCAAT507880.617996764728286No Hit
CCCCCGCCCCTTGCCTCTCGGCGCCCCCTGTAGGCACCATCAATAGATCG404500.49220227481411305No Hit
TCAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACACTGTAGGCACCATCA338330.4116855269168328No Hit
ATGTACACGGAGTCGAGCTCAACCCGCAACGCGACTGTAGGCACCATCAA326160.39687687009486056No Hit
TCAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACCTGTAGGCACCATCAA306360.37278390336724765No Hit
TAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACCTGTAGGCACCATCAAT277650.3378491016122088No Hit
ATGTACACGGAGTCGACCCGCAACGCGACTGTAGGCACCATCAATAGATC267220.32515770550266326No Hit
CCGTGGCGCAATGAAGGTGAAGGGCCCCCTGTAGGCACCATCAATAGATC251360.305858995790545No Hit
CCGGCGGATCTTTCCCGCTCCCCGTTCCTCCCGACCCCCTGTAGGCACCA237180.28860453780076967No Hit
TCGGCGGATCTTTCCCGCTCCCCGTTCCTCCCGACCCCTCTGTAGGCACC231990.28228926015853173No Hit
CGGGCGGGCGTCCCGCGCGTGTGGGGGGACTGTAGGCACCATCAATAGAT231840.2821067376833225No Hit
CCGGCGGATCTTTCCCGCTCCCCGTTCCTCCCGACCCCTCTGTAGGCACC229470.2792228825750173No Hit
TCCCCGCCCCTTGCCTCTCGGCGCCCCCTGTAGGCACCATCAATAGATCG221320.2693058280886514No Hit
CCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTCTGTAGGCACCATCAATA211030.256784786289301No Hit
CAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACTGTAGGCACCATCAATA207130.25203920193386214No Hit
CCGTCCCCGCTCGGCGGGGTCCCCGCGTCGCTGTAGGCACCATCAATAGA201890.24566308346655447No Hit
CCCCCGCCCCTTGCCTCTCGGCGCCCCTGTAGGCACCATCAATAGATCGG196250.23880023839868894No Hit
TCGGCGGATCTTTCCCGCTCCCCGTTCCTCCCGACCCCCTGTAGGCACCA191140.23258230607656258No Hit
CCGGCGGATCTTTCCCGCTCCCCGTTCCTCCCGACCCCTGTAGGCACCAT180490.21962321033671015No Hit
CCGGTGGGGGGCGGGGCGGACTGTCTGTAGGCACCATCAATAGATCGGAA174710.2125900109586494No Hit
CAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACACTGTAGGCACCATCAA152250.18526031233732684No Hit
TCACCGCCCGTCCCCGCCCCTTGCCTCTCGGCGCCCCTGTAGGCACCATC143970.1751850717057796No Hit
CCGGGGGCCCGAGGTGGGATCCCGAGGCCTCTCTGTAGGCACCATCAATA135150.1644527501634793No Hit
TCGGCGGATCTTTCCCGCTCCCCGTTCCTCCCGACCCCTGTAGGCACCAT130990.1593907935176778No Hit
CGGCGGATCTTTCCCGCTCCCCGTTCCTCCCGACCCCTCTGTAGGCACCA128150.15593503465371716No Hit
CGGGGCCCGGTGGGGGGCGGGGCGGACTGTCTGTAGGCACCATCAATAGA127020.15456003200714125No Hit
CCCCGCCCCTTGCCTCTCGGCGCCCCCTGTAGGCACCATCAATAGATCGG125930.15323370202062114No Hit
TCCCTGGTGGTCTAGTGGTTAGGATTCGCTGTAGGCACCATCAATAGATC121250.14753900079409446No Hit
CCGGGGGCGGGCGGGCGTCCCGCGCGTGTGGGGGGACTGTAGGCACCATC117710.1432314703791576No Hit
CAGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACCTGTAGGCACCATCAAT112650.13707437888210094No Hit
GCGGGGGCGGGCGGGCGTCCCGCGCGTGTGGGGGGACTGTAGGCACCATC106120.12912856712799425No Hit
TCCTCCCGGGGCTACGCCTGTCTGAGCGTCGCTCTGTAGGCACCATCAAT104510.12716949256074897No Hit
CGGCGGATCTTTCCCGCTCCCCGTTCCTCCCGACCCCCTGTAGGCACCAT103310.12570931275907546No Hit
CCGGTGGGGGGCGGGGCGGACTGTCCCTGTAGGCACCATCAATAGATCGG99300.12082987858848313No Hit
TCCCCGCCCCTTGCCTCTCGGCGCCCCTGTAGGCACCATCAATAGATCGG96770.1177513328399548No Hit
TCACCGCCCGTCCCCGCCCCTTGCCTCTCGGCGCTGTAGGCACCATCAAT93690.11400353801565945No Hit
AGCGGGCCCCCGGTGGGGCGGGGGGCCCGGACACCTGTAGGCACCATCAA91140.11090065593710324No Hit
TCACCGCCCGTCCCCGCCCCTTGCCTCTCGGCCTGTAGGCACCATCAATA89790.10925795366022054No Hit
TCACCGCCCGTCCCCGCCCCTTGCCTCTCGGCGCCCCCTGTAGGCACCAT89430.10881989971971849No Hit
CCGTGGCGCAATGAAGGTGAAGGGCCCCTGTAGGCACCATCAATAGATCG88890.10816281880896542No Hit
TCGGGGCCCGGTGGGGGGCGGGGCGGACTGTCTGTAGGCACCATCAATAG88440.10761525138333783No Hit
TGGCCCGGTGGGGGGCGGGGCGGACTGTCCCTGTAGGCACCATCAATAGA86100.10476790077007449No Hit
CCGTCCCCGCTCGGCGGGGTCCCCGCGTCGTCTGTAGGCACCATCAATAG83900.10209090446700639No Hit
CCGTCCCCGCTCGGCGGGGTCCCCGCGTCGTCCTGTAGGCACCATCAATA82930.10091059246065362No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)